Os01g0200600

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0200600| Description = Similar to Avr9/Cf-9 rapidly elicited protein 111A| Version = NM_001048853.1 GI:115435119 GeneID:4327064| Length = 8...")
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Gene Name

Os01g0200600

Description

Similar to Avr9/Cf-9 rapidly elicited protein 111A

Version

NM_001048853.1 GI:115435119 GeneID:4327064

Length

896 bp

Definition

Oryza sativa Japonica Group Os01g0200600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5453752..5454647

Sequence Coding Region

5453913..5454599

Expression

GEO Profiles:Os01g0200600

Genome Context

<gbrowseImage1> name=NC_008394:5453752..5454647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5453752..5454647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccagcgagcagagctccgagtcgtcgtcgacggcgtccacgtcgtcgtgcggcaagaaacagcaggtggccgggaagaggaagcgcgaggacgtcggcggcggcggggagcaggcggcggcggtggcgtacaggggggtgaggatgagggcgtgggggaagtgggtgtcggagatcagggagccgaggaagaagtcccgcatctggctcggcaccttcccgtgcccggagatggcggcgcgtgcgcacgacgtcgccgcgctcagcatcaagggcgcccgcgccgtcctcaacttccccgacctcgcccctgccctcccgcgcccggcctccctcgccccccgcgacgtccaggccgccgccgccctcgccgccgtcatgcaccaccacaaacacccctcctcctccacctccacctcctcgccgccggctgctcctccgccggacgaacaccaccctcgccacgagccgcagcagcctgagtcgagcagggaggatgaccagcagcagcagccggcggcggcggcggcggcgcagatggcggtggccgagctggtgttcgacgagctggcgccgctgtgggtggaggacgtggtggagttcgggacgtcggatcattgctggacggcgtacgatgcgcttgaccccatcggcttccagcctctcctctgggagtactag</cdnaseq>

Protein Sequence

<aaseq>MAASEQSSESSSTASTSSCGKKQQVAGKRKREDVGGGGEQAAAV AYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPCPEMAARAHDVAALSIKGARAVLNFP DLAPALPRPASLAPRDVQAAAALAAVMHHHKHPSSSTSTSSPPAAPPPDEHHPRHEPQ QPESSREDDQQQQPAAAAAAQMAVAELVFDELAPLWVEDVVEFGTSDHCWTAYDALDP IGFQPLLWEY</aaseq>

Gene Sequence

<dnaseqindica>49..735#cccacctccgcgtcgtcgtcgtcgtcgtcgagcgctcgatcgatcgccatggcagccagcgagcagagctccgagtcgtcgtcgacggcgtccacgtcgtcgtgcggcaagaaacagcaggtggccgggaagaggaagcgcgaggacgtcggcggcggcggggagcaggcggcggcggtggcgtacaggggggtgaggatgagggcgtgggggaagtgggtgtcggagatcagggagccgaggaagaagtcccgcatctggctcggcaccttcccgtgcccggagatggcggcgcgtgcgcacgacgtcgccgcgctcagcatcaagggcgcccgcgccgtcctcaacttccccgacctcgcccctgccctcccgcgcccggcctccctcgccccccgcgacgtccaggccgccgccgccctcgccgccgtcatgcaccaccacaaacacccctcctcctccacctccacctcctcgccgccggctgctcctccgccggacgaacaccaccctcgccacgagccgcagcagcctgagtcgagcagggaggatgaccagcagcagcagccggcggcggcggcggcggcgcagatggcggtggccgagctggtgttcgacgagctggcgccgctgtgggtggaggacgtggtggagttcgggacgtcggatcattgctggacggcgtacgatgcgcttgaccccatcggcttccagcctctcctctgggagtactaggctgctgcttgtaaaacagcttcctcttcttttcttttcttttctttttttggttttgttttttgtgtggattttttcccctagtgctgcttaaaatgtggcttgttttttttcttctctctttcaatcttgatttgagttggatttggagtttgtgtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0200600, RefSeq:Os01g0200600