Os01g0205500

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Revision as of 04:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0205500| Description = Similar to 60S ribosomal protein L11-2 (L16). Splice isoform 2| Version = NM_001048874.1 GI:115435161 GeneID:4327087|...")
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Gene Name

Os01g0205500

Description

Similar to 60S ribosomal protein L11-2 (L16). Splice isoform 2

Version

NM_001048874.1 GI:115435161 GeneID:4327087

Length

2209 bp

Definition

Oryza sativa Japonica Group Os01g0205500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5769042..5771250

Sequence Coding Region

5769130..5769132,5769248..5769355,5769792..5769834,5769925..5770120,5770816..5771014

Expression

GEO Profiles:Os01g0205500

Genome Context

<gbrowseImage1> name=NC_008394:5769042..5771250 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5769042..5771250 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagaagaagcaggcgaacccgatgcgggagatcaaggtgcagaagcttgtcctcaacatctccgtcggcgagagcggagatcgcctcacccgcgcctcgaaggtgctggagcagctgagtgggcagtcaccggtgttctccaaggcgaggtacactgtgaggtcgttcggcatccggcgtaatgagaagatcgcgtgctacgtgacagtgcgtggtgagaaggcaatgcagctcctggagagtggcctgaaggtgaaggagtacgagctgctgaggaggaacttcagtgagactggatgctttggttttggtatccaggagcacattgatcttggcatcaagtatgacccatccactggtatttacggtatggacttctacgtcgttcttgagcgtgctgggtaccgtgttgcgcggcgccgtaggtgcaagtcccgtgttggtatccagcacagggtcaccaaggaggatgccatgaagtggttccaggtcaagtacgagggtgtcatcctcaacaaggcccaagccaacacctcctaa</cdnaseq>

Protein Sequence

<aaseq>MASEKKQANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSG QSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETG CFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKED AMKWFQVKYEGVILNKAQANTS</aaseq>

Gene Sequence

<dnaseqindica>89..91#207..314#751..793#884..1079#1775..1973#cttccccgccgccgcccgagcaacactaaaccccccatctccgccgctcccgcctccccctcgccgccgccgcctcccagatctcgccatggtgagaggcgcgccgccttgccgtcggcgacgtcttctcctcgattcgttcttctgtccgctcgggcgcgcgtggttttgatgcgttttcttttggttggtttctgtgctcgcaggcgtcggagaagaagcaggcgaacccgatgcgggagatcaaggtgcagaagcttgtcctcaacatctccgtcggcgagagcggagatcgcctcacccgcgcctcgaaggtaataatcacgatgcacctgttcatgtcatgtcagattcggcttggtttagtcatgtagagctgtacggtttgttggtttcagataggctgagtgcaatggtgagctttccagtccggattgtgtagcggctagctattgtttggttctgggcatttttattctttgattgatgtgtgtccaatctagctgttgtctggttgctcgtggatggtttataaagttgtgttactgatgctgctagcatgaagccattacgattagaagctggtttggactttcaatttattccatttgtcgaatttgtagattgggcatgattagtccagcctcattggcctcaaatgaacattttgttttgactttgagttttatgcatcatgttttcgatcgtccatactcaaatgtatgtaaattctgctgtttgttctgttaggtgctggagcagctgagtgggcagtcaccggtgttctccaagggtaaattctgaagtctggcctgttattatcagtggtatgtggtttattgctggctttcagacttggagtgacgatgatgcgatattgcagcgaggtacactgtgaggtcgttcggcatccggcgtaatgagaagatcgcgtgctacgtgacagtgcgtggtgagaaggcaatgcagctcctggagagtggcctgaaggtgaaggagtacgagctgctgaggaggaacttcagtgagactggatgctttggttttggtatccaggagcacattgatcttggcatcaagtaagattatataatcccataatcttgtattatttcaatgtagagcatttgttactaaacttccttttcaacgcccaaatgtagttacttttcttcatgcgtagatttttatttgggtgaaatgtagtttttaaaatcagtttgatctgtgtatttactacatttgttgtttctgtatcaaaatcctcacttcaaatctcaaatgctactcatctttcaacatttgtaatgtttgatgtataacagaaacagtcgtgctatgcattggttcctaaattttgttcagtgtatgtttcatgcgacgtagttgatcatccaatgttgcactagtgtgctagcctcttggactcgtagcaggttattgagtatcttcttttactacgatatgctcttgcttttagtacgatatgctctcgtgcactgttgcaaaatgtttgctagtgttttccagctaatgtatcattgtattgttattgtttgatatgttcttggaatcccatgttaactaattatattcacagtatttgtcaaggcacattgttctattgatagtagttccttgatgtacatagacctgctgacacattgtctgttttttttgttgactgcacactaacccctcaatatcaccccatcatcatcattgaatgaagttatgtattcacaagtaaattgacctatctgttgcctttcaggtatgacccatccactggtatttacggtatggacttctacgtcgttcttgagcgtgctgggtaccgtgttgcgcggcgccgtaggtgcaagtcccgtgttggtatccagcacagggtcaccaaggaggatgccatgaagtggttccaggtcaagtacgagggtgtcatcctcaacaaggcccaagccaacacctcctaagcgtcactagtgcctagttctctttagaacttgagttatttggatgttggatttgtatgcttcttaaaactaaagatgttttgttattttgtcaactttgagttggatcagttttggtggtatgtactttcatcttaatgctcagatctatttactctcttagcagagatagatatatgatttgacatatgctacgaactgctgtcaatgttgataaaatgaaaagagaatggttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0205500, RefSeq:Os01g0205500