Os01g0207200

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Revision as of 04:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0207200| Description = Similar to Peptide-N4-(N-acetyl-beta-glucosaminyl) asparagine amidase A (EC 3.5.1.52) (PNGase A) (Glycopeptide N-glyco...")
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Gene Name

Os01g0207200

Description

Similar to Peptide-N4-(N-acetyl-beta-glucosaminyl) asparagine amidase A (EC 3.5.1.52) (PNGase A) (Glycopeptide N-glycosidase) (N-glycanase) [Contains: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A light chain (PNGase A small chain) (PNGase A subunit B)

Version

NM_001048883.1 GI:115435179 GeneID:4327096

Length

2273 bp

Definition

Oryza sativa Japonica Group Os01g0207200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5827536..5829808

Sequence Coding Region

5827873..5829744

Expression

GEO Profiles:Os01g0207200

Genome Context

<gbrowseImage1> name=NC_008394:5827536..5829808 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5827536..5829808 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgccgccgaccacggccgccgccgaccccggccgccgccgccgcctcctcctcgtcgtcgttgtcctcctcctcctcctcctcccgctcgtggcctccgctgccgccgtgccgcacaggcaccggctgccgtcccaccacctggcctcgctcaaactcaacgcatcggcgccgccgaccacttacttcgaggtggatcgcccgatccgcccgccgcgcggcagcgtcgggccctgctcgacgctgctcctctccaactccttcggagccacctacggccgtccccctgtcaccgccgcctacgcgccgccttcctgcctcgccggcggcggtggcggcggcggcggcgcgtcgtccatcgcgctcgccgtgctcgagtggagcgccgactgccgcggccgccagttcgaccgcatcttcggcgtgtggctctccggcgccgagctcctgcgcagctgcaccgcggagccgcgcgccacgggcatcgtctggtccgtgtcccgcgacgtcacgaggtacgcggcgctcctagccgagcccggcgagatcgcggtgtacctcgggaacctcgtcgacagcacgtacaccggcgtctaccacgccaacctcacgctccacctctacttccaccccgcgccgccgcctccgcctccgccgcagcaggccgatctgatcgtgcccatctcaagaagcttgccgctgaacgatggccaatggttcgccatccagaactccaccgatgtgcagggcaagaggctcgccattccgtcgaacacctaccgggcgatccttgaggtgttcgtctccttccactccaacgatgaattctggtacacaaaccctcccaatgagtacattgaagcaaataacttgtccaatgtccctggcaatggcgcattccgggaggttgttgttaaagtcaatgatgatatcgttggagctatttggcctttcaccgtgatttacactggcggtgtcaatcctcttctgtggcgaccaatcaccggcattggttcattcaacctacctacatatgacattgacattacacctttcttgggcaagctgttggatggcaaggagcatgattttgggttcggtgtgactaatgcgctggatgtgtggtatattgatgccaatttgcatctatggttggatcacaagagtgaggagactactgggagcctgatcagctatgaagctcaaggactggttctgaatgtggactcgggattcagtgggctggatgggcagtttgtaactagcgcaagccgtcatatctccgctaccgggttggtgaaatcgtcttatggggaggtcaccacgaatttttaccagagattcagttatgtgaatagcaatgtgtatagcaagaacggctcggtgcaagtggtgaaccaaaccattgatgcaaagtctggtgtttttgccaaggatgctttggctgtgctgctctctgaggaacttcaccagatcttccctctgtatgtttatactggtacttcagatgaagaagctgatgagtacacattgatttcacacgtcaaattgggcgtcaacgagaaggagacatcgggcgggaagatggggttctcatacaactccctgcggaacgcgcagtcggcccatggcagtatgaaggtgaagaagaatttggtcgttggtggattgggggagacccatcaggcgtataaatatgttggtgctgatggatgctacttcagggatgttaggagcaagaactacacagtgctttcagaccactctggtgattcctgcacaaagagaaatccttacaatggtgctaaattctctctcaggaacgatcaatcagcaagaaggaagttgatggtgaataatctttag</cdnaseq>

Protein Sequence

<aaseq>MASPPTTAAADPGRRRRLLLVVVVLLLLLLPLVASAAAVPHRHR LPSHHLASLKLNASAPPTTYFEVDRPIRPPRGSVGPCSTLLLSNSFGATYGRPPVTAA YAPPSCLAGGGGGGGGASSIALAVLEWSADCRGRQFDRIFGVWLSGAELLRSCTAEPR ATGIVWSVSRDVTRYAALLAEPGEIAVYLGNLVDSTYTGVYHANLTLHLYFHPAPPPP PPPQQADLIVPISRSLPLNDGQWFAIQNSTDVQGKRLAIPSNTYRAILEVFVSFHSND EFWYTNPPNEYIEANNLSNVPGNGAFREVVVKVNDDIVGAIWPFTVIYTGGVNPLLWR PITGIGSFNLPTYDIDITPFLGKLLDGKEHDFGFGVTNALDVWYIDANLHLWLDHKSE ETTGSLISYEAQGLVLNVDSGFSGLDGQFVTSASRHISATGLVKSSYGEVTTNFYQRF SYVNSNVYSKNGSVQVVNQTIDAKSGVFAKDALAVLLSEELHQIFPLYVYTGTSDEEA DEYTLISHVKLGVNEKETSGGKMGFSYNSLRNAQSAHGSMKVKKNLVVGGLGETHQAY KYVGADGCYFRDVRSKNYTVLSDHSGDSCTKRNPYNGAKFSLRNDQSARRKLMVNNL</aaseq>

Gene Sequence

<dnaseqindica>65..1936#gtcttttttacttgcgagctcaactgtcgccgcccccacctctcgtactccccacgctccagccatggcgtcgccgccgaccacggccgccgccgaccccggccgccgccgccgcctcctcctcgtcgtcgttgtcctcctcctcctcctcctcccgctcgtggcctccgctgccgccgtgccgcacaggcaccggctgccgtcccaccacctggcctcgctcaaactcaacgcatcggcgccgccgaccacttacttcgaggtggatcgcccgatccgcccgccgcgcggcagcgtcgggccctgctcgacgctgctcctctccaactccttcggagccacctacggccgtccccctgtcaccgccgcctacgcgccgccttcctgcctcgccggcggcggtggcggcggcggcggcgcgtcgtccatcgcgctcgccgtgctcgagtggagcgccgactgccgcggccgccagttcgaccgcatcttcggcgtgtggctctccggcgccgagctcctgcgcagctgcaccgcggagccgcgcgccacgggcatcgtctggtccgtgtcccgcgacgtcacgaggtacgcggcgctcctagccgagcccggcgagatcgcggtgtacctcgggaacctcgtcgacagcacgtacaccggcgtctaccacgccaacctcacgctccacctctacttccaccccgcgccgccgcctccgcctccgccgcagcaggccgatctgatcgtgcccatctcaagaagcttgccgctgaacgatggccaatggttcgccatccagaactccaccgatgtgcagggcaagaggctcgccattccgtcgaacacctaccgggcgatccttgaggtgttcgtctccttccactccaacgatgaattctggtacacaaaccctcccaatgagtacattgaagcaaataacttgtccaatgtccctggcaatggcgcattccgggaggttgttgttaaagtcaatgatgatatcgttggagctatttggcctttcaccgtgatttacactggcggtgtcaatcctcttctgtggcgaccaatcaccggcattggttcattcaacctacctacatatgacattgacattacacctttcttgggcaagctgttggatggcaaggagcatgattttgggttcggtgtgactaatgcgctggatgtgtggtatattgatgccaatttgcatctatggttggatcacaagagtgaggagactactgggagcctgatcagctatgaagctcaaggactggttctgaatgtggactcgggattcagtgggctggatgggcagtttgtaactagcgcaagccgtcatatctccgctaccgggttggtgaaatcgtcttatggggaggtcaccacgaatttttaccagagattcagttatgtgaatagcaatgtgtatagcaagaacggctcggtgcaagtggtgaaccaaaccattgatgcaaagtctggtgtttttgccaaggatgctttggctgtgctgctctctgaggaacttcaccagatcttccctctgtatgtttatactggtacttcagatgaagaagctgatgagtacacattgatttcacacgtcaaattgggcgtcaacgagaaggagacatcgggcgggaagatggggttctcatacaactccctgcggaacgcgcagtcggcccatggcagtatgaaggtgaagaagaatttggtcgttggtggattgggggagacccatcaggcgtataaatatgttggtgctgatggatgctacttcagggatgttaggagcaagaactacacagtgctttcagaccactctggtgattcctgcacaaagagaaatccttacaatggtgctaaattctctctcaggaacgatcaatcagcaagaaggaagttgatggtgaataatctttagtgttgtatagcttggaacaaatagggaactgaactgtccatggttctctccattttactctgtctcttgatctcttcaataaagggagtttagcttagcttatctttgatgtgtagtcagtaagaaacttggaaatttctctataaccgcttcaaattgaatccccctagagaaaaactttgaacttcccctgctagatagtggaaagtaagcaataggctattcagatcaagattctgagggatgcaatctctcccttttcttttatctttcatgttgaattgttttagtgtacagatccgagtccaaactccatatgaagcatattgaccattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0207200, RefSeq:Os01g0207200