Os01g0209700

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Revision as of 04:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0209700| Description = Similar to GA 2-oxidase 5| Version = NM_001048899.1 GI:115435211 GeneID:4325537| Length = 3671 bp| Definition = Ory...")
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Gene Name

Os01g0209700

Description

Similar to GA 2-oxidase 5

Version

NM_001048899.1 GI:115435211 GeneID:4325537

Length

3671 bp

Definition

Oryza sativa Japonica Group Os01g0209700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5967799..5971469

Sequence Coding Region

5968022..5968261,5968779..5969136,5970955..5971364

Expression

GEO Profiles:Os01g0209700

Genome Context

<gbrowseImage1> name=NC_008394:5967799..5971469 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5967799..5971469 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgcttgccaagggcgagctcgagcagatagccctgccggcggcgcacccgccgccagccgacgtgcgcgcgatcgacctgtccgccacgggtcccgcccgcgcggcggaggcgcgcgcgctggtggcggcgtgcgaggagcaggggttcttccgggtgacgggccacggcgtgccgccggggctggtgcgcgccgcggaggccgccgcggcgcggttcttcgcgctgccgcagcccgacaaggaggccgccgcaggggcgccgctcgggtacgccagcaagcggatcggcagcgccggcgacctcggctggatcgagtacctgctactctgcctcgcccccgccgccgccgccgcggcattgccgtgcgccgcgacgtcgcccacgcctccttgccccttacgggagcttctacgcgagtacagcgcggcggtgcggcgggtggcgtgcggcgtgctggagctgatggcggaggggctcggcgtcgggccggcggacgcgctggcgcggctggtggcgcgcgaggacagcgactccatcctcagggtgaaccactacccgccgcgccccgatcagctgggcggcggcggcgggccgaacctgacggggttcggcgagcacaccgacccgcagatcatctccgtgctccgctccaacggcgcccccgggctggagatctccctccgtgacggcgcctgggcgtccgtgccgcacgacggcgacggcgactcctttttcgtcaacgtcggcgacaccctccaggtgctaacgaacgggaggttcaggagcgtgaagcacagggtggtggtgaacagcgagaagtcgagggtgtccatggtcttcttcggcggcccgccgcccggcgagaggctggcgccgctgccggcgttattaggggacggcggccggagccggtacagggagttcacctggaaggagtacaagggcagcggctgcaagggccggctcgccgacgacaggctctgcagatttgagaactag</cdnaseq>

Protein Sequence

<aaseq>MVVLAKGELEQIALPAAHPPPADVRAIDLSATGPARAAEARALV AACEEQGFFRVTGHGVPPGLVRAAEAAAARFFALPQPDKEAAAGAPLGYASKRIGSAG DLGWIEYLLLCLAPAAAAAALPCAATSPTPPCPLRELLREYSAAVRRVACGVLELMAE GLGVGPADALARLVAREDSDSILRVNHYPPRPDQLGGGGGPNLTGFGEHTDPQIISVL RSNGAPGLEISLRDGAWASVPHDGDGDSFFVNVGDTLQVLTNGRFRSVKHRVVVNSEK SRVSMVFFGGPPPGERLAPLPALLGDGGRSRYREFTWKEYKGSGCKGRLADDRLCRFE N</aaseq>

Gene Sequence

<dnaseqindica>3209..3448#2334..2691#106..515#atcaaactcaaccatccttgctttggctgcgtagcgtgtagcgcgcgcgaacgaacgaacacaccaagctttgctctgcttttcctctgtccaaaacagccggccatggtggtgcttgccaagggcgagctcgagcagatagccctgccggcggcgcacccgccgccagccgacgtgcgcgcgatcgacctgtccgccacgggtcccgcccgcgcggcggaggcgcgcgcgctggtggcggcgtgcgaggagcaggggttcttccgggtgacgggccacggcgtgccgccggggctggtgcgcgccgcggaggccgccgcggcgcggttcttcgcgctgccgcagcccgacaaggaggccgccgcaggggcgccgctcgggtacgccagcaagcggatcggcagcgccggcgacctcggctggatcgagtacctgctactctgcctcgcccccgccgccgccgccgcggcattgccgtgcgccgcgacgtcgcccacgcctccttgccccttacggtaaataccgatctttccaaacgcagcagcagcagcgccctactgctactatctcgcggtgttctagattatatcttttaagatttgatgaagtataattataaacgttttattatcgataaatacatcgtttatcataaaaaattaattagtcataaatatgagtatgccactgtaataaatctaaacggtgaatcgtattttggcacgccaccacgtgcggggtgcgtcggattttgaccgttccgggaaggaagcgagcgaaggcaccaggcggctggacaaagcggtgacatctacgtctgcgttgcgcgttgcaccggcgggttactgttgcttccgtgccgctgcctgcgcagacagatacatgcaccgttgctgcacgcatgtcacgtctctcctccgttcctttgggcattattaagtccagtcatcgttgaatcatcattttcttcgcatcactttattttcctttaacaaactttaataattggtccattggaacgttcgtgtcaaacagtagatggagggtccgatcctagtgagctgagctcggacaagtggagtacttgtttcgacagtacggacacatgatgtgtgcaacacagggtttattggggtgtagtgtagggactgatctgaagtcgttatacgcgcgcgcgagcagcaaaacggaatcatgctattattagttccattccattttgctgtgtagtagtataagcaagcgatagttttgtccaggaatctttctgatgttcgcatgcaccagcattggataccttaggacttgctgttcttcttttccccgtgtatttccatttggcacgtggaacattttacttgagttgaagttcacaggaacgtcagcaacattctaaaaagctcattaagtgtggtgtgtggtggagccatgtcacccatgtgcgcatgacttcactcattaccagtggtctaagagggtgtttgggagagacttatgcttttgtgaaagggacttcctattttccaaacacccctaaattatattaccaaaaaatacacacgtacgcatatacttaatttatcattggtttttatctttttaagtcttagagtgtaatagtgtagtgttgtgtgattgagaaaagattcgggattcaaattcatgacgtgggtatcgttctccattaattaattcgagtcacgcatatgttttcagactttcagcattactctttccgttccatataaagtaaatctagaaccgaatataatacattttaatactataaatctagacatatttatatttagattcgtcgtggatgtatcacctccaatcttaagttaattcttctagaggggcttttgatacattcataaataagcgttcatttattgtagtgttgcccatctggtaaattaatagtgagaaaatcgtgtggataagatcgcccatcgtggccgcgtgtcgcttcacaatatctcggggccgacgtacggagaccggcgccggcggctccgtctgacgctgccgttttgattcacgtgcgcgcacggtcgcatcgccgtacgtggcgcagctcgccacatcggtcgcatgcatggtggtgatcgaccaacaccaccgccggatcatgcatgatgcatctcccctgacctgcggatctgcccgtctctatccacaaaccttttacatcatcacgatccaagccgccgatcgaattcgttgcgcgattttggcttgatctctttgttggtttcttcttcagttgcgttctgcgtgaaccgcgatcggtggtttagtctggtttgtttattttgctcgcggtgcagggagcttctacgcgagtacagcgcggcggtgcggcgggtggcgtgcggcgtgctggagctgatggcggaggggctcggcgtcgggccggcggacgcgctggcgcggctggtggcgcgcgaggacagcgactccatcctcagggtgaaccactacccgccgcgccccgatcagctgggcggcggcggcgggccgaacctgacggggttcggcgagcacaccgacccgcagatcatctccgtgctccgctccaacggcgcccccgggctggagatctccctccgtgacggcgcctgggcgtccgtgccgcacgacggcgacggcgactcctttttcgtcaacgtcggcgacaccctccaggtacgtagtacacgtactatacttccgttgcttgcgtgcacacacaaaattaaaggtcaaaaagtttggtcacttctgctgtttcgcgtacgtgcccctgtcgatgtcgaatcgaccgttccatcgatctccaatccagtcgagcaaatcagggtgatcagtgcacgatcgactgcacggtgtactatgcgtcaagcaagcgccatcaacgcacggttacttgtatggttaactagcacaatcatctgcatgccatgcatatatagggcccagcctgcacgtgaaaacacgtacacttgcatgctagtacgtacgtgcctactactactactaatgggtccatgaacggtgatgagatcgatcggtcactgcaatttgccaactctcaagaaaaggccatgcaaattgttgcacatcacatcgattaattattgacttaattatttacatttctctgtatccctgaggttaaatttctttgtgctgctcgtgtgtttgcgctttgcaacccacccaggtgctaacgaacgggaggttcaggagcgtgaagcacagggtggtggtgaacagcgagaagtcgagggtgtccatggtcttcttcggcggcccgccgcccggcgagaggctggcgccgctgccggcgttattaggggacggcggccggagccggtacagggagttcacctggaaggagtacaagggcagcggctgcaagggccggctcgccgacgacaggctctgcagatttgagaactagtagtagcagtcatctgacttctatgtacgtttgtgtatattaattcgcaagtagtgattatcactgtggtttgcctctagcaatagccttgtacgtaaatttcagtatgtgttaatctgtttatatataagcttccagcaaaagttgcatgcatgtaagtgctctgtggacagtttagttttattacaattaaatgagctctcttaagatgatggttgctagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0209700, RefSeq:Os01g0209700