Os01g0209800

From RiceWiki
Revision as of 04:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0209800| Description = Similar to Cationic amino acid transporter (Fragment)| Version = NM_001048900.1 GI:115435213 GeneID:4325538| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0209800

Description

Similar to Cationic amino acid transporter (Fragment)

Version

NM_001048900.1 GI:115435213 GeneID:4325538

Length

2208 bp

Definition

Oryza sativa Japonica Group Os01g0209800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5982606..5984813

Sequence Coding Region

5982806..5983307,5983404..5984752

Expression

GEO Profiles:Os01g0209800

Genome Context

<gbrowseImage1> name=NC_008394:5982606..5984813 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5982606..5984813 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgtcgatacgccggagaagccgtacgagggtaagccggcggcggaggcgaggagctactggcggtggcagaaggaagatttcttcccggagccgtccttcgcgagctggggcgcgtaccgcgcggcgctggccgcgacgcccgcgcggttccgcgaccgcttcgccggccgctccaccgacgccgacgagctcggcgcgctgcgccgccgcagcgagaacgagatgcgccgctgcctcacgtggtgggacctcacgtggttcgggttcggctccgtcatcggtgccgggatcttcgtgctcaccggccaggaggcgcacgaccacgccggcccggccatcgtgctctcctacgtggcctccggcctctccgccatgctgtccgtgttctgctacacggagttcgccgtcgagatccccgtggccggcggctccttcgcctacctccgcgtcgagctcggcgacgtggcggccttcatcgccgccgcgaacctcatcctcgagagcatcatcggcacggccgcggtggcgcgctcctggacgtcgtacctcgcgtcgctcatcaacaagccggcgagcgcgctgcgcatacagacgtcgctcgccgaggggtacaacgagctggaccccatcgcggtggtggtgatcgcggtcacggcgaccctggccattctgagcgccaagggcacctcccgcgtcaactgggtcgcctccgccgtgcacgtcctcgtgatagccttcgtcatcgtggccggcttcctccacgcgaagaccagcaacctgaccccgttcatgccgcacggcgtgccgggcgtgttccgcgcggcggcgatcgtctacttcgcctacggcgggttcgacaacatcgcgaccatggcggaggagaccaagaacccatcgagagacatccctctcgggcttctcggctccatgtcggtgatcacggccatctactgcgtgatggcgctggtgctgagcatgatgcagccgtacacggcgatcgaccggagcgcggcgtactcggtggcgttcagcaacgtcgggatgcggtgggcgcagtacgtggtggcgctcggcgcgctcaaggggatgacgacggtgctgctggtcggggcgctcggtcaggctcggtacaccacgcacatcgcgcgcagccacatcatcccgccggtgttcgcgctggtgcaccccaggaccggcacgccggtgcacgccaccgtgctcatcgccgccgccggcgcctgcatcggcctcttctccagcctcgacgtgctctccagcctcctctccgtcagcacgctcttcatcttcatgatgatggccaccgccctcctcgtccgccggtactacgtgcggggcgtgacgagcaggacgcacgcgaggcggctggtggcgttgctatcggtggtcatcggctcgtcggcgggcatcgcggcgtactggggcgcggcgccggagcggtgggttgggtacaccgtgctggtgccggcgtgggcggcgggcacgctcggcatccagcttctggtgccggcggcgcgcgcgcccaaggtgtggggcgtgccgctcgtgccgtggctgccgtcgctgtccatcgccaccaacctcttcctcatgggctcgctcggcgcgcaggcgttcatccgcttcggcgtctgcaccgccatcatgctgctctactacgtgctcgtcgggctgcacgccacctacgacgtcgcgcacggcgcgtgctccggcgacgacgtcgacgaggaggtctacgctgatgccgcccacgtggacgatgcgaaggcggcggccgcggtcgctgccaacgcagacgtggagagggcgggcgcgaagatctga</cdnaseq>

Protein Sequence

<aaseq>MAAVDTPEKPYEGKPAAEARSYWRWQKEDFFPEPSFASWGAYRA ALAATPARFRDRFAGRSTDADELGALRRRSENEMRRCLTWWDLTWFGFGSVIGAGIFV LTGQEAHDHAGPAIVLSYVASGLSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDVAA FIAAANLILESIIGTAAVARSWTSYLASLINKPASALRIQTSLAEGYNELDPIAVVVI AVTATLAILSAKGTSRVNWVASAVHVLVIAFVIVAGFLHAKTSNLTPFMPHGVPGVFR AAAIVYFAYGGFDNIATMAEETKNPSRDIPLGLLGSMSVITAIYCVMALVLSMMQPYT AIDRSAAYSVAFSNVGMRWAQYVVALGALKGMTTVLLVGALGQARYTTHIARSHIIPP VFALVHPRTGTPVHATVLIAAAGACIGLFSSLDVLSSLLSVSTLFIFMMMATALLVRR YYVRGVTSRTHARRLVALLSVVIGSSAGIAAYWGAAPERWVGYTVLVPAWAAGTLGIQ LLVPAARAPKVWGVPLVPWLPSLSIATNLFLMGSLGAQAFIRFGVCTAIMLLYYVLVG LHATYDVAHGACSGDDVDEEVYADAAHVDDAKAAAAVAANADVERAGAKI</aaseq>

Gene Sequence

<dnaseqindica>1507..2008#62..1410#acactccaccagttgtccagttcaccaccaaagctgtggtcgatcccctccacacgaagatatggcggccgtcgatacgccggagaagccgtacgagggtaagccggcggcggaggcgaggagctactggcggtggcagaaggaagatttcttcccggagccgtccttcgcgagctggggcgcgtaccgcgcggcgctggccgcgacgcccgcgcggttccgcgaccgcttcgccggccgctccaccgacgccgacgagctcggcgcgctgcgccgccgcagcgagaacgagatgcgccgctgcctcacgtggtgggacctcacgtggttcgggttcggctccgtcatcggtgccgggatcttcgtgctcaccggccaggaggcgcacgaccacgccggcccggccatcgtgctctcctacgtggcctccggcctctccgccatgctgtccgtgttctgctacacggagttcgccgtcgagatccccgtggccggcggctccttcgcctacctccgcgtcgagctcggcgacgtggcggccttcatcgccgccgcgaacctcatcctcgagagcatcatcggcacggccgcggtggcgcgctcctggacgtcgtacctcgcgtcgctcatcaacaagccggcgagcgcgctgcgcatacagacgtcgctcgccgaggggtacaacgagctggaccccatcgcggtggtggtgatcgcggtcacggcgaccctggccattctgagcgccaagggcacctcccgcgtcaactgggtcgcctccgccgtgcacgtcctcgtgatagccttcgtcatcgtggccggcttcctccacgcgaagaccagcaacctgaccccgttcatgccgcacggcgtgccgggcgtgttccgcgcggcggcgatcgtctacttcgcctacggcgggttcgacaacatcgcgaccatggcggaggagaccaagaacccatcgagagacatccctctcgggcttctcggctccatgtcggtgatcacggccatctactgcgtgatggcgctggtgctgagcatgatgcagccgtacacggcgatcgaccggagcgcggcgtactcggtggcgttcagcaacgtcgggatgcggtgggcgcagtacgtggtggcgctcggcgcgctcaaggggatgacgacggtgctgctggtcggggcgctcggtcaggctcggtacaccacgcacatcgcgcgcagccacatcatcccgccggtgttcgcgctggtgcaccccaggaccggcacgccggtgcacgccaccgtgctcatcgccgccgccggcgcctgcatcggcctcttctccagcctcgacgtgctctccagcctcctctccgtcagcacgctcttcatcttcatgatgatggccaccgccctcctcgtccgccggtacgcacgttctcccaccttacggcggcggtgcacatgttcaagttcggcacgtagttttctgtaaccaacaatggcttcctgtaacgcgcgcaggtactacgtgcggggcgtgacgagcaggacgcacgcgaggcggctggtggcgttgctatcggtggtcatcggctcgtcggcgggcatcgcggcgtactggggcgcggcgccggagcggtgggttgggtacaccgtgctggtgccggcgtgggcggcgggcacgctcggcatccagcttctggtgccggcggcgcgcgcgcccaaggtgtggggcgtgccgctcgtgccgtggctgccgtcgctgtccatcgccaccaacctcttcctcatgggctcgctcggcgcgcaggcgttcatccgcttcggcgtctgcaccgccatcatgctgctctactacgtgctcgtcgggctgcacgccacctacgacgtcgcgcacggcgcgtgctccggcgacgacgtcgacgaggaggtctacgctgatgccgcccacgtggacgatgcgaaggcggcggccgcggtcgctgccaacgcagacgtggagagggcgggcgcgaagatctgatcacatgcctaatgatttggtacattgatgcgaagaatattcaaaactgtagcgtgcaactgcaaatatcattatctattgaacagtatctcaccaaagtgggaaatggattctctttggagggatagggatatcccctccgtctgtcgtgtcatgtaaatagttatgaaaataattgaaaaacaaacatatactatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0209800, RefSeq:Os01g0209800