Os10g0471400
| Gene Name |
Os10g0471400 |
|---|---|
| Description |
Tetratricopeptide-like helical domain containing protein |
| Version |
NM_001071363.1 GI:115482469 GeneID:4348871 |
| Length |
5907 bp |
| Definition |
Oryza sativa Japonica Group Os10g0471400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:17942111..17948017 |
| Sequence Coding Region |
17943635..17943951,17944166..17944316,17944779..17945992,17946110..17946359,17946961..17947212 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:17942111..17948017 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:17942111..17948017 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagggtaggaagattgagagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccggggagcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattgctcggccagcgggtactcgtcccagaacggagagatcgagcagtaccttgataatggcaacattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgaggaagcaagggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcacttcgtgtatttgatgggattgatatacctgctttagtccctaagatgaaaatctcaattgctagaaaagtggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgcatgctgtcagcctactcatggaggccatataccttaaatcaagagctcttcatgatcttggaaagttcaaagaagctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgagggtttaccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtagagttgctccctgaactatggaaactagggggattttcacttgaagccatatcttcatataggaggtctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaagaatttgccatttttctcctatatagtggctgtgaagcacgacctccaaatcttcattcacagttggatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatgattctattaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcaccttacatttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaattgttacctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttgcagaagaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatgattctgacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgcccaaactgaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaacaaatggcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtgccacatctgatacagagagagcttcttggcagtgtgaagctctggaggtgcttgaaaatgctgaaaataagatgcatgggaaagatcctcgtgcaatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgccttttatgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagctcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctctcgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggctgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattcaactcagaaccaaaagtctcagtgctgggatctttttggcaaagggcactaaggatgatataagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatgtcacaatggagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattctgccttggcttggcatgttaaaggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatcctatttcagagcattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctctgttcttcgagaaattggcaacaggccattgccttcggtccggtgctttctgaccgatgcgttgcaactggatcgaacaaatcatgcggcttggtttaatcttgggctactctacaaagaggaaggtggtcggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttgaagaaacagcacctgtagaacctttcaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MEGRKIERGRLRGFVRRMAMECLCSGEQLRAADEIIRSPESAIT KDCSASGYSSQNGEIEQYLDNGNIEEAELSLREGVCLNYEEARALLGRLEYQRGHVEA ALRVFDGIDIPALVPKMKISIARKVDRRKTRSQWDSPPMPLHAVSLLMEAIYLKSRAL HDLGKFKEAAQECRMILDIVEAAVPEGLPAGFGKDCKLNEIICKAVELLPELWKLGGF SLEAISSYRRSLLNNWNLDGETIARIQKEFAIFLLYSGCEARPPNLHSQLDGSFVPRN NMEEAILLLMILLRKFNLKRVERDPTIMHHLTFALSISGQLKSLAVQFEELLPGMLDK REWSYNVALCYLAEEDDSTALNLLKRILKSGDDSDNFKELLLASKACTERSAQTEGAS YAQRAIANMQGGCEQMAGVADLLLGVNLSNQARCATSDTERASWQCEALEVLENAENK MHGKDPRAMYSLSLENADQRKLDAAAFYAKKLVKLEAGSELRSWLLLARILSAQKQFA DAETIIDAALDQTGKWSQGDLLRTKARIQAAQGQLRNAVETYTKLLAVIQLRTKSLSA GIFLAKGTKDDISLEIETWYDLALLYLRMSQWRDAEVCVSKIRTISPYSALAWHVKGK LYEAKGQPKEALGSYFRALDLDRKHVPSLISTASVLREIGNRPLPSVRCFLTDALQLD RTNHAAWFNLGLLYKEEGGRSAAEAAECFQAAALLEETAPVEPFR</aaseq> |
| Gene Sequence |
<dnaseqindica>4067..4383#3702..3852#2026..3239#1659..1908#806..1057#acacactactactactcttctccctctccatctcttccctatctcccgctgccggagccaccgccgcgcgcctcgcctcgcctcgcctccacgcgctcgcggcggccggcgagcacgcccccgcccccgcccggagcgcgcgcggcgtggaaacggtgctcctctccttctccggtcccgccctaggcagcctcctcctcctccccctccgccgacgaaagcaggttcgcgagaggcggcgtgcggcgtggcggccgcggagctgaactcgaaggtgttcttctctcccctctccccctccgcgtgacagttctttgtgcccgcggtttctggaggagatccgtccggattcggattgattcctctgccttcagttaaacacatccgggttcttttgaatgcgttgtgcagtactaaaaacgcagtttcgttttttttttgttcataataaaaaggtagtaaaatttttgggcccagattaaccccccttcatgccctgcgttaggtcgggcgaactgctgcgaattttgctgtgctcgagtttggtgaaattgtgttcttccatcgaaaaaaaaacaaagaagttttcttcttttttttttgggcataccgcaaattctcgtgttgtggagtatccgtgatattttggtacaagttgtgcttgacttagttctgtgctgaattatgacgcgaatcttgtggttggttgtcacattgtactagttggtgataatcttgaatgtgctatcaaatgttaggtgattgtgtggcgagatgggaagagcaggttacatgatagagaaggatggagggtaggaagattgagagggggagattgaggggcttcgtccggcggatggcaatggagtgcctgtgctccggggagcagctgagggcggcagatgagatcatccggtcaccggaatctgcaatcaccaaagattgctcggccagcgggtactcgtcccagaacggagagatcgagcagtaccttgataatggcaacattgaggaggccgagttgtcgctccgggagggtgtttgccttaactatgaggttggtacagcttttctgaaactaattttgattttgtgacgattgcttggtgaatgcgaggtttctctgaagtctgaacctgtttctcgtgaatatatctgtgctttcctgggagtaatttatcatgacagctaatatgtttcctagttaagttaatcttgaaacattcattttttttttcattttatgctcatgtgaagataagtgtatacaaaattcaacatgtgctgaacttacctgtttttgttgacttactttaatagatgtatacctgtcttatctgctaccagaattggttcaccggttccctgccgtaccttttaataaacaatttcccatgtccttcttattctatgatttgtcaacaacatgtactcttactatacctacaatatatactggtgacagaactggcacttcagatgattattttgaattttgattacctcttaagtctctcattctctgtttaatgatcagatgctagtatcttttgttacttcacatcttcaggattttaatatctgtggacttattgattgcaatcttgacgaacacccaaaccagggcaaaatcatcacatataattaaaattttgcaggaagcaagggcattactaggaaggctagagtaccagcgtgggcatgtagaagcagcacttcgtgtatttgatgggattgatatacctgctttagtccctaagatgaaaatctcaattgctagaaaagtggatcgtcggaagactcgttcacaatgggattctccaccaatgcccttgcatgctgtcagcctactcatggaggccatataccttaaatcaagagctcttcatgatcttggaaagttcaaaggtaaccccattcctgtcacacaacatgtcagaatcagtcctgttgacattcctataattttgtgtgagattactgcaagagtaacataaattcaatatttcgaatttgattttgcagaagctgcacaagaatgcagaatgatattggatatcgtggaagcagcagtgcctgagggtttaccagcaggctttggaaaagattgtaaattaaacgaaataatatgcaaggctgtagagttgctccctgaactatggaaactagggggattttcacttgaagccatatcttcatataggaggtctcttctcaataattggaaccttgatggagagaccatagctcgcatacaaaaagaatttgccatttttctcctatatagtggctgtgaagcacgacctccaaatcttcattcacagttggatggttcatttgtacctcgcaataatatggaagaggctattcttcttctaatgattctattaaggaagttcaatctcaagagggttgagcgggatcctactataatgcatcaccttacatttgctctgtccatctcagggcagctaaagtcactagctgtacaatttgaagaattgttacctggcatgctggataaaagagagtggtcatacaatgttgcgttgtgttaccttgcagaagaagatgattcgacagccctgaatcttctcaaaaggatattaaaatctggagatgattctgacaatttcaaagaactcctcttagcttcaaaggcttgcactgaaaggagtgcccaaactgaaggtgcttcctacgcacagagagcaatagccaatatgcagggaggatgtgaacaaatggcgggtgttgcagacctgctgcttggagttaacctttctaatcaagctagatgtgccacatctgatacagagagagcttcttggcagtgtgaagctctggaggtgcttgaaaatgctgaaaataagatgcatgggaaagatcctcgtgcaatgtacagtctcagccttgaaaatgctgaccagagaaaattagatgctgctgccttttatgccaagaaattggtgaaattagaggctggatcggaattgaggagttggcttcttttagctcgaatactatctgctcagaaacagtttgctgatgctgaaaccattattgatgctgctctcgatcagactgggaaatggagtcaaggagatttattgcgaaccaaagccagaattcaggctgcacagggccaactcaggaacgctgttgagacatacaccaaacttctcgctgtcattcaactcagaaccaaaagtctcagtgctgggatctttttggcaaaggtgctttaaaaattctattttgaaattcatcagagataatcacatattcttgcacaatatcaattattcttagactagtagctcttgaaactctactgtttctgttacatcagttatctggtagcattttctaccagctgaaacatgattctacgttcattttaattcccattttcatgactagagataattcccttgatgtgacctacctaatctcctttctgaaagcataataagtttaaaaaatgtcagatttatacattacctaatcaactatcaagagtcaccacacttcccttttacttttgtttgtcgtaaatttggtcttgttcatgcatggaacaaatgggcacttataaaccatgcgactgcttggtgtaagcattgtgtgttggctgtgatgcagctgagaagcaaataaaaggcccctcatctctgacattctcttgcaactttttacagggcactaaggatgatataagcctggaaatagagacctggtatgatctagctctgttgtacctacgcatgtcacaatggagggatgcagaggtctgtgtatccaagataaggaccatcagtccatattctgccttggcttggcatgttaaaggtgattattgtttatttcttataaagtatgtgacatgttagaattttagatggggggaagcgaagataaaatttctaactgttttgtactcaagtttttctatttggcattgcaatctgcaaaatgggaacataggagaaaagcttttgcattaaacctgcaaatattatatctaagatctttttgacattatttgtacatattcgatttgcaggaaaactctatgaagcaaaaggtcaaccaaaagaagccttgggatcctatttcagagcattagaccttgaccgtaaacatgttccaagtttgatatcaactgcctctgttcttcgagaaattggcaacaggccattgccttcggtccggtgctttctgaccgatgcgttgcaactggatcgaacaaatcatgcggcttggtttaatcttgggctactctacaaagaggaaggtggtcggtcagcagcagaagctgcagaatgtttccaggcggctgctcttcttgaagaaacagcacctgtagaacctttcaggtgacacttgtatgtacaggtgctatagaaactgtaagctattgtttgtcttttgaaatgtttcatttacactgatgaaaaggtagattgcagaactccagtcatgacctttgggagattatagtgtcagaaattgttggagaaaaacttggttaacagtcaatatatatagcctcagttcattttttatgtagatttctgaaaaatgatattcctcttgatttcttcatggatcaactttgttcagtttgatttatagatggtcagggcaacaatgtgatgagtatatcttgagaagcagcatgtcttaaaagtctgatgtatttttatttctggtactgatgccaattacataaatgtctcagcaaatcagaacttcagcagtagatgagaagttatcgatgccctcactaccaaggcctttgaaatttatgtaatccagtggtacctcttgtgactgcatggtaatgttggatacttgtggatgcttgccatgctgacaaccaaagcttttttcgcagattgcacatgtatatttttaaagcattagaattgtttctgatgcagcagactgcattgctctatatagacttttactgaggccttccttggtttcctgacctccatgaagatccttcagcatttactactgttcattcagcagcttatctagtactagtactagactcaaatgaatgctggtagatattggtctcttttcatgcactaatgggactgtctgctgtctacctaattaaatggtgtctcaaccttcttgttggtggttttttgttaaagtcagatgacgatgaatcggaggaattccaatcattttttttctggtaagcttgctccaaatttcacacatgttcttctagtgcatcaatgaatttctttttatgatcatatggtttcctactgaaatatgaagctgatcttgtattgtctgaaatttgcagttacctgttaattacctcacataaaaccagttacctgttcttctacggaaataggaaaaatttttagctagttaacttagttcaatttcaccatgaaatctgattttttttttcaaactccagttaaatttccaggcctgcctgcttacactgcttccattttacagtcttctagcatagcaactttgaaaacgcatcctggacattgacttgtgttctttgcctttgcaggtagcaccatagcaacatgtaaaaaaaaaaaatccaaaatgaaacaggcccatgcaaatgtaagctcggtgtgaatatttatgccctttgctgaagccttctccatcatccatgcaaacttgtggataaatggttcagccttattccctgaacgtcagtaaatccgttgtgcatgaattgctgagatgttcaggggattctcgtgacgtcattgtgccgtcattttatggcaaggagcgttgttttaacatttctttggtacatggtcatgaattttccattgttgtgtactctaccgaatctactattagctgaactggaatcaaatatcttaacag</dnaseqindica> 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