Os01g0215700

From RiceWiki
Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0215700| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001048931.1 GI:115435275 GeneID:4325263| Length = 3178 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0215700

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001048931.1 GI:115435275 GeneID:4325263

Length

3178 bp

Definition

Oryza sativa Japonica Group Os01g0215700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6318110..6321287

Sequence Coding Region

6318421..6318706,6318806..6319021,6319127..6319275,6319372..6319645,6320833..6321044

Expression

GEO Profiles:Os01g0215700

Genome Context

<gbrowseImage1> name=NC_008394:6318110..6321287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6318110..6321287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcgcgccatggcggcctccaggcgggtctcggtgttcgtcgccgcgttggtctgctgctcactcgtgcggctctcccggtgcggcggcggcggcggcgggcagagggcgcagaactacacctcgatgttcagcttcggcgactcgctgacggacaccggcaacctcgtcgtgtccagcccgctctccttcagcatcgtcggcaagtacccctacggcatgacatacttccaccgccccaccggccgctgctccgacggccgcctcgtcgtcgacttcctcgcgcaagcgttcgggctgccgctgctgcagccgtacctgtcgcgcggcgaggacgtcacgcggggcgtcaacttcgccgtcggcggcgcgacggccatggatccgccgttcttcgaggagatcggcgcgtccgacaagctctggaccaacctgtcgctcagcgtccagctcggctggttcgagcagctcaagccctcactctgcagctcacccaaagattgcaaggagttcttcagcaagtcactcttcctcgtcggggagattgggggaaacgactacaactacgccttcttcaagggcaagagcttggacgacgccaaatcctacgtccccaccgtcgccggcgccgtcgccgacgccaccgaaaggctgatcaaggcaggggcggtgcacctggtggtgcccgggaacctgccgatcggctgctcgtcagcgtacctgacgctgcacccgagcagcaacaggagcgactacgactccaccggctgcctcaagacgtacaacgacttcgcccagcaccacaacgccgtgctccaggacaagctccggctgcttcgccggagctacccggaggccaggatcatgtacgccgactactacggcgccgccatgtccttcgcccagaaccccaagcagttcgggttcaggcacggggcgctgaggacgtgctgcggcggcggagggccgtacaacttcaacccgaaggcgagctgcggcgtgcggggctccagcgtgtgcacggacccgtcggcgtacgccaactgggacggcgtccacctgacggaggccggctaccacgccatcgccaacagcatcctcaatggcccttacaccagcccaaggctgctctga</cdnaseq>

Protein Sequence

<aaseq>MSRAMAASRRVSVFVAALVCCSLVRLSRCGGGGGGQRAQNYTSM FSFGDSLTDTGNLVVSSPLSFSIVGKYPYGMTYFHRPTGRCSDGRLVVDFLAQAFGLP LLQPYLSRGEDVTRGVNFAVGGATAMDPPFFEEIGASDKLWTNLSLSVQLGWFEQLKP SLCSSPKDCKEFFSKSLFLVGEIGGNDYNYAFFKGKSLDDAKSYVPTVAGAVADATER LIKAGAVHLVVPGNLPIGCSSAYLTLHPSSNRSDYDSTGCLKTYNDFAQHHNAVLQDK LRLLRRSYPEARIMYADYYGAAMSFAQNPKQFGFRHGALRTCCGGGGPYNFNPKASCG VRGSSVCTDPSAYANWDGVHLTEAGYHAIANSILNGPYTSPRLL</aaseq>

Gene Sequence

<dnaseqindica>312..597#697..912#1018..1166#1263..1536#2724..2935#acgtgagccttcaattatgtcgcccggaggccggagctctgcctcgcgtccatggcgtcgtccctacctacgtactgtagcgcagttgtaactgcgtatgcgagtcgtgatattttaccggagtcgggacgaacgctcgtcgcgcgctgcgcgcacgcacctaccccagatttgccctcggcatttacgccctcacctacaatctcaagcgagcccgattaatgccctctttatagtcccaccattgccgagctcatcccaatgcagaaaccatccagcgtgtagtgtgtagcgtgtagtgtgtcgtcacgatgtcgcgcgccatggcggcctccaggcgggtctcggtgttcgtcgccgcgttggtctgctgctcactcgtgcggctctcccggtgcggcggcggcggcggcgggcagagggcgcagaactacacctcgatgttcagcttcggcgactcgctgacggacaccggcaacctcgtcgtgtccagcccgctctccttcagcatcgtcggcaagtacccctacggcatgacatacttccaccgccccaccggccgctgctccgacggccgcctcgtcgtcgacttcctcggtgcgcgccgccgccgcccgccccaatgccgtcgcatttctctctctctctctgcacatttgatttgacattatcgatcttgtcgtgttggcctcgcagcgcaagcgttcgggctgccgctgctgcagccgtacctgtcgcgcggcgaggacgtcacgcggggcgtcaacttcgccgtcggcggcgcgacggccatggatccgccgttcttcgaggagatcggcgcgtccgacaagctctggaccaacctgtcgctcagcgtccagctcggctggttcgagcagctcaagccctcactctgcagctcacccaaaggtctctctgcacatttctcattcctgcgatttggttcgaatcgtacgcgttgatactgattctgagactggattcttgacatttttctgtgctgaatcggagcagattgcaaggagttcttcagcaagtcactcttcctcgtcggggagattgggggaaacgactacaactacgccttcttcaagggcaagagcttggacgacgccaaatcctacgtccccaccgtcgccggcgccgtcgccgacgccaccgaagtgcatctcttcactacaccaaacactgaaacaataatcacagaatgtacatccattctctcatcttgcaatggtggattttttttcaatttccagaggctgatcaaggcaggggcggtgcacctggtggtgcccgggaacctgccgatcggctgctcgtcagcgtacctgacgctgcacccgagcagcaacaggagcgactacgactccaccggctgcctcaagacgtacaacgacttcgcccagcaccacaacgccgtgctccaggacaagctccggctgcttcgccggagctacccggaggccaggatcatgtacgccgactactacggcgccgccatgtccttcgcccagaaccccaagcagttcggtgagtgagctctctcacacacacaaaaacctcactccaatttcacactcatttcgctgtcctagttaagctaagccagttgagctgatagccttagctgtccagttgaaattgaatgaatggacagagaggcaactgactgaactgttgtgcatttgcatcgctgatgctggaattgacagcgatagagattagaacggtagcaatcacgatggccccgccacgatctctcatcaatcatcttcgatatgggcgtgtagatacatttaggagcgtgtgagatgcagtgggagattgtcgggctctttcagaaaagattagaggatttgggactcctattggccactcttctttagggaaaatattacttctttgttgcactgaaaagctcagtgtcttcgtcatctcatctgaactaggataaaactacatggtcagtgaaagtgatacatggatcttctttagtcgttttgctttagaattttgagctatgtcattctcaggaaagacagtataggcactgatcatccgttgctgttaatcaggacaatactgaacctctgaggctctgcctatgtgtaactatttgctgatagctgattagtttctttgttagtgttggatcaggttctagaagtatgtactacatttgtttgacgtgtattaataagcattgatttcaagtcatgtgacatgcttaagcctaactgttactccataatagtagtatttagtactccaccatgttcaccaactcccagcgatatactcctactaggtgtcatcaatagcatgtcatgtcaatttatctggcgcccggcggttaccaggtttcggttggccggttaagctctcaccaatttggagctgaattatcattgcagtagcattggcagctcagtgaacagtacatatgctctcaaggctagttcagtgttcacaatttcagaatgaaatctctgaaacttttggggtctaccaatgcatcctgaaattccggatgtgtctgaacttggcaaaataaatgttcaaattcagcagaacctgttccaaatttaacaatttccattcggaattcaccgaattttttcccccgttccgaaaccgtgaacctgtgggttagctcaccgatgaactggagctgagctgtgtgggtggctgcactgtctgtctctgtgtccctgcagggttcaggcacggggcgctgaggacgtgctgcggcggcggagggccgtacaacttcaacccgaaggcgagctgcggcgtgcggggctccagcgtgtgcacggacccgtcggcgtacgccaactgggacggcgtccacctgacggaggccggctaccacgccatcgccaacagcatcctcaatggcccttacaccagcccaaggctgctctgaccatcccccgttctctcgacctggtgttagctgctgctgctgctgctgcactctgcaatgtaaactgatctgtaatgtagtgatatgagctagtggtggttttgagttttgacagtgtgtgggctttggctacttgagtctccaggcacagtacagtatgtctgtcgagtgtcatcagctttgggcgtgactgtgtccgtgctacttttgactttgcaagtactgaattatagtactcagcac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0215700, RefSeq:Os01g0215700