Os01g0216000

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0216000| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001048932.1 GI:115435277 GeneID:4325264| Length = 3451 bp| D...")
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Gene Name

Os01g0216000

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001048932.1 GI:115435277 GeneID:4325264

Length

3451 bp

Definition

Oryza sativa Japonica Group Os01g0216000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6339816..6343266

Sequence Coding Region

6339886..6340153,6340266..6340481,6341888..6342036,6342137..6342413,6342716..6342999

Expression

GEO Profiles:Os01g0216000

Genome Context

<gbrowseImage1> name=NC_008394:6339816..6343266 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6339816..6343266 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcactcaccttcaaacgaaatgaccctccttctccttctcttcctccttggatgcacacactacggtcacgccggctcagaccgtcccaagatcgactccatcttcagcttcggcaactcgtacgccgacaccggcaacttcgtcaagctggcggcgccggtgttccccggcatccctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgcgcctccaatggccgcctcaacgtcgacttcatcgctgagggccttggagtccccttgctcgccccgtaccatggcgagtcgcaggacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgatctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcactgagcgtgcaggtcgagtggttccaaaagctcaagcctaccttgtgctcgacaacccaagggtgcaaagactacttcgagagatcgctcttcttcatgggcgagataggcggtaacgactacgtcttcctctatgccgccggcaagaccgtcgacgaggccatgtcatacgtgccaaaggtcgtccaagccatctctgccggcgtcgaggcggtgatcaaggagggagccaggtacgtggtggtgccgggccagctgccgacgggctgcctcccgatcatcctcacgctgtacgcgagcccggccgcggcggactacgacgccggcaccggctgcctgtggcggttcaacgcgctcgcacgctaccacaacgcggtgctgttcgcggcggtgtcgctgctccgggccaagcacccgtcggtcgccatcgtcttcgcggactactaccgcccggtgatcaagttcgtgcaaaacccagacgaattcgggttcagcgagtcgtcgaagctccgggcgtgctgcggcggcggcggcggggcgtacaactacgacgtggcggcggcgtgcggcttccccggcgcggcggcgtgcccggaccccgacgcggcgatcaactgggacggcatccacctcacggaggcggcctacggccaggtcgccgccggctggctccgcggcccgtacgcgcatccgcccatcctcgcggccgtgcaacgatctgacgaaggaaaccccatccaaatggctacgtcgatgcctgcctctttctga</cdnaseq>

Protein Sequence

<aaseq>MQHSPSNEMTLLLLLFLLGCTHYGHAGSDRPKIDSIFSFGNSYA DTGNFVKLAAPVFPGIPFNNLPYGETFFGHPTGRASNGRLNVDFIAEGLGVPLLAPYH GESQDFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFQKLKPTLCSTT QGCKDYFERSLFFMGEIGGNDYVFLYAAGKTVDEAMSYVPKVVQAISAGVEAVIKEGA RYVVVPGQLPTGCLPIILTLYASPAAADYDAGTGCLWRFNALARYHNAVLFAAVSLLR AKHPSVAIVFADYYRPVIKFVQNPDEFGFSESSKLRACCGGGGGAYNYDVAAACGFPG AAACPDPDAAINWDGIHLTEAAYGQVAAGWLRGPYAHPPILAAVQRSDEGNPIQMATS MPASF</aaseq>

Gene Sequence

<dnaseqindica>71..338#451..666#2073..2221#2322..2598#2901..3184#aaccagcctgaattcctgaagtcctaagctatagctagcactagcagctagttgctccaaagcccaaaccatgcagcactcaccttcaaacgaaatgaccctccttctccttctcttcctccttggatgcacacactacggtcacgccggctcagaccgtcccaagatcgactccatcttcagcttcggcaactcgtacgccgacaccggcaacttcgtcaagctggcggcgccggtgttccccggcatccctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgcgcctccaatggccgcctcaacgtcgacttcatcggtgcacttccatcccgaattatacattcccgattaataattaatacaaatctgtttcagtcacagagaaacgcacatcagtgtgatcatttcaacaacttttgcatgcgcagctgagggccttggagtccccttgctcgccccgtaccatggcgagtcgcaggacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgatctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcactgagcgtgcaggtcgagtggttccaaaagctcaagcctaccttgtgctcgacaacccaaggtacgtagatagtataatgtatgcacacgtatttgtgatatcggttgatgatcagttttgcagaagatagtacggtggttaggggtgtgtgatttcagtctcaaggtatcccatgttcaattcccaataaacttaatttttttggagggacgtcgatcgatatccctatctttgatatcttcaggaagtgtatatatatgctcggttggtgtcgatcagagagttaaatgatcgtcggttactttttcaaaaataacaaaaataaacacacagctgaaataataaaaacaaattaatgacacaaaaagttattttaacattatcagagaaattaatccatcacgcccagcacaattaatacttgaatggtgttgttacagtactcgcgttgaaaatcaaccccgtaaacagtaaacgtcaaatcgctttaaactaaaaacgaaaatcaagaacttcaccaattcattcgatgtgaaatttgaaaataagttctagacatagtctaagttctttttttaatagaaaaacacaaaaacaacagataaaattgacgggatagaataaaacattaatctaagcaatctgataggcatgcacgaaaacgtaggttaaataaaaccaaccgatagacgtaggttaaataaaactaaccgatagaattgaatcatttctttgaggtaaaagctaatttcactacgaatctaacaaaacaactacactcaaatccgacagttccatcaaaatttgaatgcaatataagattagtgaaaagcttatctaaactcaccttgcgcaaaatcggaatttaattgcgtgaatatcctcgtcccatatctttcatcttcatgcgaacaagctagagcatgactatatattaacatctcttgaccgattatgacctgaaaacccccaccgtagtctcggtccctcgacactcaccatgcattatcaccttctagcttctcatgtgcatcaaagataaaaaagaaagagcaattttatatctctcagaaacaaagtccttctaacttcatccacctaattaaggccctgcttgattcagcttaggattattataatctggattattagaagtaagctgaaacaaacaagtagattattatgctaaattattataatctataatccaataatctcctctagaggagctttttttagattattgagtggctagagacccactacccttagatgcctctaataatccagagaaacaaacaactcgtagcttattttatgtcaacttattataatccagcttagagtaatctgatttaataatctagattacgataatcttaaactgaaacaaacagggcctaagtccaaacaataatcattgtagccaattattaatcacccatgtaacacatgatattttacagggtgcaaagactacttcgagagatcgctcttcttcatgggcgagataggcggtaacgactacgtcttcctctatgccgccggcaagaccgtcgacgaggccatgtcatacgtgccaaaggtcgtccaagccatctctgccggcgtcgaggtagatagatcactgatcatagatgttccttaatctctctcacattctgagttgcagtcgtatccaagctggttaactaattaactaaaccaaaatgcaggcggtgatcaaggagggagccaggtacgtggtggtgccgggccagctgccgacgggctgcctcccgatcatcctcacgctgtacgcgagcccggccgcggcggactacgacgccggcaccggctgcctgtggcggttcaacgcgctcgcacgctaccacaacgcggtgctgttcgcggcggtgtcgctgctccgggccaagcacccgtcggtcgccatcgtcttcgcggactactaccgcccggtgatcaagttcgtgcaaaacccagacgaattcggtgagtcattcgatcgatcacatcggttggctgattataagcataagccaaatgatatatttgcaggtgaaaaataattcgtgaataaaatttttatatacgtgtccttaaatatttaaaaataaaggctgaaagataaactacgataaaaaaatcctaaaatcaacttcaaactgataagtagtataaacgaaaagacgaggctaattgatcgatcgaagcttcggccctagctgtatgttcatgcatatcgctaataaacaacatggttccattaattgattaactcacgctgcatgcagggttcagcgagtcgtcgaagctccgggcgtgctgcggcggcggcggcggggcgtacaactacgacgtggcggcggcgtgcggcttccccggcgcggcggcgtgcccggaccccgacgcggcgatcaactgggacggcatccacctcacggaggcggcctacggccaggtcgccgccggctggctccgcggcccgtacgcgcatccgcccatcctcgcggccgtgcaacgatctgacgaaggaaaccccatccaaatggctacgtcgatgcctgcctctttctgatacgctctccttttgagtcactttgtctctgttattcttaatccaagagtaccccagctgttaattgtatatgctcctttaaaaaggagtccataagtgacagttactggaagtcggagctgcttcatcgattgcgatgagtttggcagcgatatataaccggtgacgagtctgagtagttgcgttgttctggggttttgcttatgctttctgtgtggtttttgctggtttttcataaatgaaccgtgtggttgtatggttctgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0216000, RefSeq:Os01g0216000