Os01g0216300

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0216300| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001048933.1 GI:115435279 GeneID:4325265| Length = 5774 bp| D...")
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Gene Name

Os01g0216300

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001048933.1 GI:115435279 GeneID:4325265

Length

5774 bp

Definition

Oryza sativa Japonica Group Os01g0216300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6351562..6357335

Sequence Coding Region

6352614..6352890,6352985..6353200,6353335..6353486,6355693..6355969,6356740..6356978

Expression

GEO Profiles:Os01g0216300

Genome Context

<gbrowseImage1> name=NC_008394:6351562..6357335 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6351562..6357335 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcactcaccttcaaacaggatgaccttccttctccttctcctcctccaactcctcattggatgcacacactatgctcaggccaaccctggccatcacatgatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagcttgccgcgccgctgcttcccgtcatcccattggacaacctcccctacggcgagaccttcttcggccaccccgctggccgtgcctccaatggccgactcatcatcgacttcatcgccgggcactttggagtccctttcctccccccatatcttggccaggtgcagaacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgacctcgccttcttccagaagaacaacatcacaaacgttcccccgttcaacagctcactgagcgtgcagctcgagtggttccacaagctcagacctaccttgtgctcgaaaacccaagggtgcaaacattacttcgagagatcgctcttcttcatgggagagttcggcgggaacgactacgtcttcctcttggccgccggcaaaaccgtcgacgaagtcatgtcatgctacgtaccaaaggtcatcggagccatctctgccggcgtcgaggcggtgatcgaggagggagccaggtacgtggtggtgccgggccagcagccgacgggttgcctcccggtcgtcctcacgccatacgcgagcccgaacgcgacggactacgacgccggcaccggctgcctgtggcggttcaacgagctcgcacgctaccacaacgcggcgctgttggcggcggtgtcgctgctccggcgcaagtacccgtcggccaccatcgtctttgccgactactacgacccggtgatcgagttcatgcagaagccagacgatttcgcattcagtgactcgtccaagctccgggcgtgctgcggcggcggcggcggaccatacaactacaacgcgacggtggcgtgcggcctcccaggcacaagcgtgtgcccgacccccaacacgtccatcaactgggacgggatccacctcacggaggcggcctacgcccgcatcgccgcctgctggctgcacggcccgcacgcgcatccgcccatcctggcggccgtgcgccgccgcacgtag</cdnaseq>

Protein Sequence

<aaseq>MEHSPSNRMTFLLLLLLQLLIGCTHYAQANPGHHMIDSIFSFGN SYSDTGNFVKLAAPLLPVIPLDNLPYGETFFGHPAGRASNGRLIIDFIAGHFGVPFLP PYLGQVQNFSHGANFAVVGATALDLAFFQKNNITNVPPFNSSLSVQLEWFHKLRPTLC SKTQGCKHYFERSLFFMGEFGGNDYVFLLAAGKTVDEVMSCYVPKVIGAISAGVEAVI EEGARYVVVPGQQPTGCLPVVLTPYASPNATDYDAGTGCLWRFNELARYHNAALLAAV SLLRRKYPSATIVFADYYDPVIEFMQKPDDFAFSDSSKLRACCGGGGGPYNYNATVAC GLPGTSVCPTPNTSINWDGIHLTEAAYARIAACWLHGPHAHPPILAAVRRRT</aaseq>

Gene Sequence

<dnaseqindica>1053..1329#1424..1639#1774..1925#4132..4408#5179..5417#atttctctgcaacactggatcgcactgccgccgccgccgacgcctcaacttatcgacagcgatcgatagccacggccggcgacgcacggcacgactctctcaatcggtcgcggccacgcgcggtcggcgaggccaccgtgtacgccggtaagaacacgccgccaagaggttagtcgctggacatcgtttttcaagatcagattaattatgattaatcacacctttgcacgtactaccaattagtcccccaactacttgccaattgatccagtcactactcactactagtgcttagattctttttataatgatgattcatcttataagtattagtattaatgatgttaaatacagatataaaattgctgctagggaatatttatcgaaggaagataagaagtttataacattatatcattacttcactagttctctgactaagaaaatatctagttttcagagtgtgcgccatgatcgattggtattaatttttgttgtagtttttagggattttagttgttattagttgctactacaatgttttgtgcaaatgcgtaaaattatgcttaaagtactttagtaataaaataacttataacaaaataaaaaataattatgtttttaattagataaatttttaaacatgtgttaaaaactcaacgacgtcatctattaaaaaaggaggcagtactacctatgttattttttattttgacgcttcaatatcaacgcaatcttcaaagtacatattttatcactaattttctaacttatatactccctctgcccaaaaagtccaaaaatataacaagtattagttatgaatctagacacacatgattcatagctaaacttatattttaagatgagggtagtatttatcaaatttaataaaagtataactggaaactatgaagtataaacatgtactactaattgctctgtcattatcaaacaaatacatgttaataacatgaaggatctcactggtggcgccaatcctgaattcctgcaggcctaagctagcagttggacaaaagcccaaattaaccatggagcactcaccttcaaacaggatgaccttccttctccttctcctcctccaactcctcattggatgcacacactatgctcaggccaaccctggccatcacatgatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagcttgccgcgccgctgcttcccgtcatcccattggacaacctcccctacggcgagaccttcttcggccaccccgctggccgtgcctccaatggccgactcatcatcgacttcatcggtacagtacatacttgttttccaattaatgccggatggcatggtggctacctgatcgactgtctgacgaactaattatcgatcgtttcaagcagccgggcactttggagtccctttcctccccccatatcttggccaggtgcagaacttcagccatggcgccaacttcgccgtcgtcggcgccacggcgctcgacctcgccttcttccagaagaacaacatcacaaacgttcccccgttcaacagctcactgagcgtgcagctcgagtggttccacaagctcagacctaccttgtgctcgaaaacccaaggtacgtgtaaattgtaatgttataggtaatcttggttaattgatcgatttggtattttttggtcgttgaattcagcagctagtaagctagctaggacgattcatcgatctctcatgttcctttgatctcttcagggtgcaaacattacttcgagagatcgctcttcttcatgggagagttcggcgggaacgactacgtcttcctcttggccgccggcaaaaccgtcgacgaagtcatgtcatgctacgtaccaaaggtcatcggagccatctctgccggcgtcgaggttagcacaggatttccttcacgtctctctcagatgcagtcttgctgttgcagccacgtcgacgtccttcacctctgaaaaaacctactcaatccatcccaaaatataacaactttagacctattcactttgataccatttttaaccttaccaaattttggtattgtcaaaattttggcataattaccaaaattttggtagcaggatttcttatatagttatcaaaatttggcagcaaactaaatgtagccacttttttggcaactttaccaaaatttggtaaggttgaaaatggcatcaaagtgaacagtcccttttagccctcaggatttgtcccaaaatataacttctccatcaacattctcttcccaaccaatctcaactctccacgattcgcttttcccaccaacatccattacttattcaatcacaatcctccaccatttacttctacctaatttcttaataactgtgtccaactctaaaattttttatatttcggtacagaggaaataatatataacaatatataacataccggttcacttaaaaccagcgtacgagccatttctcgattatcccgacacacatacgtaagggtaaaagtaaaagttaattaagaatcggcatatatgagaatatatatgtgtgcgccccagttttaaaaaatcggtacatatgttattagcacatttacaagtatataacatatgcggtagttttgaaaagtggcacatatgaacgtcatatatgtgatgtttttttaaaaaaaaatggcatatagaagtgcaagggtataagtattggttttaaagaaccaacatatatatacaatcatatataagtgtttgttctttgaaaaattgacactaaataccaatatcacttatttgtgcatttttaaggtgtgaatatcgagggatatatagctttatagttgatattttttttcatttgagatcatttacatgtccaatgcaaatatatatatgcgttaggtgttcactgaactgtttggataaatgggtttataagattttcaaacggatttgcttatgaaatttgtacatcgacaatatgtaaaagtatgtactccagttgacaattaatctttttgtttgaacttatctagactaccaaattcactttacaagtttcaacgggagcagtaaaagaagcatctatttcgtagacacgaagtttttatatgtaagatgatgagaacggtagcatgcgtggagatgtcttgtatttcctagtaaaatatttgttttcgctagaaaaaaatgtcaaagaactatataagccttgtccagttgtcttagattaaatgtgttatatgcattaaaaaacagtttatatgtgttgttccagaaccacatgcgtgctgttcggtttcctaggtaggatattaaatctagcttgctattgtacttggtctaagaggtttggaaccaacactcttagagtctgcagcccggtccaccaaccgtgggccacccaggtcacattaggcctgctccaccacaggcccaaccggagccacaactttagattctggacctacacaacccaaaagactagtctgatgggtgaggaccgcgcgcccccatcttttttaagtcgtgctcccccatcgtcaattactgatgtgagactaaacccaataatctccctcggcacacatcgggcccaataatctcccccgtcacattaactcatgtgaccccgaagacttgttacctagcctccccatcatgtgacctatggaaatcgttcctggttccaaaccttggctctgatacgacttgttataaaagttagtcgatatagcggaacgacaactaacctttctgatcgcttcattcattgatctcccaagatatgccagatggcgactacaatgtagcatagatatgcagggagaggatggcggcgtggctatggactcgtagcggctaggtgttatattggttggggaggagcgcccataatcagagccctagggatgtaggcttatgctaaaccttgttaacaaatatcgtgtgtgtctgtgtcgtcatctggcatgtcttggaagatcaatgactgaaacgatcgggaaagttagtcgtcgtttcgctatatcgactaacttttataacaaacatggattaagtttaatttttatatttagtgcacgctgattaactaaatcaaaatgcaggcggtgatcgaggagggagccaggtacgtggtggtgccgggccagcagccgacgggttgcctcccggtcgtcctcacgccatacgcgagcccgaacgcgacggactacgacgccggcaccggctgcctgtggcggttcaacgagctcgcacgctaccacaacgcggcgctgttggcggcggtgtcgctgctccggcgcaagtacccgtcggccaccatcgtctttgccgactactacgacccggtgatcgagttcatgcagaagccagacgatttcggtgagtcattattgtctcattatttgatcgatctctgattctctgattcttttctttttaagcttaattggcagccggatggctgcaaatccccatcgaaggtaaatgcttgccttatatatatgagtatctctctactttctccatcctaaaatagtttagtacgtataatactatattagaaataatctaatataatgaatctcagatatcattattattttatgttgtaatttgtgtgtatatatcattggtctgatgtactactttcctttcatattataagtttctcttttttcgctatttttctactcaattttctttagatttgactaggttcataaaaaaattaacaatatttgcaacgctaaattagtttcattaaatataacattgagagaaatttttggtacatgagaatgtacctgaagatacctaaattttacactaaaagttttgatttctcaagatacttattagtatatggaggtactaagttttatactagaaaatatgtatctcttagtactttttcaagaatgataaaattactctaatattaaatatattttgataatatgtttgctttgtgttaaaaatattactatattttctttataaacttaactaaacttaaaaaggtttaactaataaaatagtgaaagcgacctataacaattataaatggagggagcagtagcgtgaaatctgaatataattattttctctctttctgacgtcactagctaacttggtcacctacactgcagcattcagtgactcgtccaagctccgggcgtgctgcggcggcggcggcggaccatacaactacaacgcgacggtggcgtgcggcctcccaggcacaagcgtgtgcccgacccccaacacgtccatcaactgggacgggatccacctcacggaggcggcctacgcccgcatcgccgcctgctggctgcacggcccgcacgcgcatccgcccatcctggcggccgtgcgccgccgcacgtagacggatttgaggttatgtagaaatccatctactgaaatgctgataatactctaagctaccctttgtcaacttcactttagtttttcacaagctcgttttgtaaactgataaacgatacgttttctaataaaaaatagaataggaaagttactttgaaaagatcatattatttttcaaaaataagttaagttaatatttaattaatcatgtgttcatgcatgggtatcacgtaagtggatatatggtacttattgaatcttttatgggcctgagtcggtatgtaagatatatatatcatacattgtttatcgatgccgattatataattcttattatgatgtcgtagttgctattgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0216300, RefSeq:Os01g0216300