Os01g0216400

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0216400| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001048934.1 GI:115435281 GeneID:4325266| Length = 1932 bp| D...")
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Gene Name

Os01g0216400

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001048934.1 GI:115435281 GeneID:4325266

Length

1932 bp

Definition

Oryza sativa Japonica Group Os01g0216400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6360506..6362437

Sequence Coding Region

6360506..6360782,6360882..6361097,6361211..6361359,6361454..6361730,6362208..6362437

Expression

GEO Profiles:Os01g0216400

Genome Context

<gbrowseImage1> name=NC_008394:6360506..6362437 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6360506..6362437 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcactcaccttcaaacaaaatgaccctccttctcctcctcctcctcctccttggatgcacgcaccacggtcaggcgaacatgtactccggccatcccaagatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagctggcggcgccggtgattcccgtcatcgctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccgacggccgcctcaacgtcgacttcatcgctgaggactttggagtccccttgctccccccgtaccttggcgagtccaagaacttcagccatggcgccaacttcgccgtcgtcggcgccacagcgctcgacctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcattgagcgtgcaggtcgagtggttccacaagctcaagcctaccttgtgctcgacgacccaaggttgcagagattacttcgagagatcgctcttcttcatgggcgagttcggcggcaacgactacgtcttcctcttggccgccggcaagaccgtcgacgaggccatgtcgtacgtgccaaaggtcgtcggagttatctctgccggcgtcgaggcggtgatcgaggagggagccaggtacgtggtggtgccgggtcagctgccgacggggtgcctcccgatcatcctcacgctgtacgcgagcgcgaacgcgacggactacgagtccggcgccggctgcctgaggcggttcaacgagctcgcacgctaccacaacgcggcgctgttcgcggcggtgtcgctgctccggggcaagcacccgtcggccgccatcgtcttcgccgactactaccagccggtgatcgagttcgtgcgaatgccagaaaatttcgggttcagtcgctcgtcgaggctccgggcgtgctgcggcggcggggggcggtacaactacaacgcgacggcggcgtgcggcctcgccggcgcgacggcgtgcccggaccccgccgcgtcgatcaactgggacggcgtccacctgacggaggcggcctacggccgcatcgccgccggctggctgcgcggcccgtacgcgcagccgcccatcctcgcggccgtgcgcccgtag</cdnaseq>

Protein Sequence

<aaseq>MEHSPSNKMTLLLLLLLLLGCTHHGQANMYSGHPKIDSIFSFGN SYSDTGNFVKLAAPVIPVIAFNNLPYGETFFGHPTGRASDGRLNVDFIAEDFGVPLLP PYLGESKNFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFHKLKPTLC STTQGCRDYFERSLFFMGEFGGNDYVFLLAAGKTVDEAMSYVPKVVGVISAGVEAVIE EGARYVVVPGQLPTGCLPIILTLYASANATDYESGAGCLRRFNELARYHNAALFAAVS LLRGKHPSAAIVFADYYQPVIEFVRMPENFGFSRSSRLRACCGGGGRYNYNATAACGL AGATACPDPAASINWDGVHLTEAAYGRIAAGWLRGPYAQPPILAAVRP</aaseq>

Gene Sequence

<dnaseqindica>1..277#377..592#706..854#949..1225#1703..1932#atggagcactcaccttcaaacaaaatgaccctccttctcctcctcctcctcctccttggatgcacgcaccacggtcaggcgaacatgtactccggccatcccaagatcgactccatcttcagcttcggcaactcgtactccgacaccggcaacttcgtcaagctggcggcgccggtgattcccgtcatcgctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgcctccgacggccgcctcaacgtcgacttcatcggtgcgcgcgcttcaattccctcgtgattactgcaccggcgagcatggatacttgatcgatcgatcgatcgatatattgatcatttgaacaacattgcagctgaggactttggagtccccttgctccccccgtaccttggcgagtccaagaacttcagccatggcgccaacttcgccgtcgtcggcgccacagcgctcgacctcgccttcttccagaagaacaacatcaccagcgtgcccccgttcaacacctcattgagcgtgcaggtcgagtggttccacaagctcaagcctaccttgtgctcgacgacccaaggtacgtacgtccgtgtaatgctacatctaatcttggtaattaaccgatcattaattttggtggaagagaattcatcgatcgatcacctgtttgattgatctgtacgtcttcaggttgcagagattacttcgagagatcgctcttcttcatgggcgagttcggcggcaacgactacgtcttcctcttggccgccggcaagaccgtcgacgaggccatgtcgtacgtgccaaaggtcgtcggagttatctctgccggcgtcgaggttaccacagttctctttccttcagacgctaattaattaagttgctgtcacgtcctagctgattaattaatcaattaattaaaccaaaatgcaggcggtgatcgaggagggagccaggtacgtggtggtgccgggtcagctgccgacggggtgcctcccgatcatcctcacgctgtacgcgagcgcgaacgcgacggactacgagtccggcgccggctgcctgaggcggttcaacgagctcgcacgctaccacaacgcggcgctgttcgcggcggtgtcgctgctccggggcaagcacccgtcggccgccatcgtcttcgccgactactaccagccggtgatcgagttcgtgcgaatgccagaaaatttcggtgagtgtatatataattatatgatttgttcgatttctctgattctctgcacacgcacgtacggctgaatttaatgcttcaagaattttgacctgaattagcaggcggatggcttagttgcaagtctccatcgcgaaagtaaacgttgtcttgttgttgagtacgctagttgcatgcatcgcaaaaaaaaagtccacggtcgactagaaaatttagtgatgttgaaacgagaatttttgaaattgtctggaatgagctcatgtctcgcgcaaacagagtaattaataaagagtttacgatacgaatatatcactggtctgatatacttatatgaccatattttcgccgacttgatcgattcggagatctacgagttgaaacatcaaagtacttaattagtgatctgaaatgctttctgttttgttgttgtctctttctgacctcgctaataactttggttgccaacgctgcatgcagggttcagtcgctcgtcgaggctccgggcgtgctgcggcggcggggggcggtacaactacaacgcgacggcggcgtgcggcctcgccggcgcgacggcgtgcccggaccccgccgcgtcgatcaactgggacggcgtccacctgacggaggcggcctacggccgcatcgccgccggctggctgcgcggcccgtacgcgcagccgcccatcctcgcggccgtgcgcccgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0216400, RefSeq:Os01g0216400