Os01g0216900

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0216900| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001185304.1 GI:297719742 GeneID:9271443| Length = 4577 bp| D...")
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Gene Name

Os01g0216900

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001185304.1 GI:297719742 GeneID:9271443

Length

4577 bp

Definition

Oryza sativa Japonica Group Os01g0216900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6376241..6380817

Sequence Coding Region

6376241..6376517,6376611..6376829,6376922..6377070,6377220..6377493,6380585..6380817

Expression

GEO Profiles:Os01g0216900

Genome Context

<gbrowseImage1> name=NC_008394:6376241..6380817 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6376241..6380817 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaactactcaccctcaaaaccagttgccttcctcctcctcctcctcctcttcggttgcctgcattacgctcaggcgaaccccggccatcgtcgtcccaagatcgactccgtcttcagcttcggcaactcgttcgccgacaccggcaacttcgtcgagctggccgcgccgctgcttcccatcatgcctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgctaccaatggccgcatcatcatggacttcatcgctgacgagtttcatgtgccgttcgtaccaccgtttcttggccaaggtcgtcagaacttcacccatggcgctaacttcgccgtcgtcggtgccagcgctcttgatctcgccttcttcctcaagaacaacatcaccaacgtgcccccgttgaacatctccctgagcgtgcagctggagtggttccagaagctcaagccaaccttgtgccaaacagcccaagaatgcagagagtacttcaagagatcactcttcttcatgggagagtttggtggcaacgactacgtcttcatcttggccgccggaaaaaccctcgaggaacttgtcccctacgtgccaaaagtcgtccaagccatctctgcgggcatcgaggcggtgataaaggaaggagcgagatacgtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccggccagattcggattcaacggctcgtcgacgctacgcgcgtgctgcggcgccggcggcgggccgtacaactacgacgcgacggcggcgtgcgggctccccggcgcggcagcgtgcccggacccggcggcgttcatcagctgggacggcatccacctcacggaggcggcctacgcccgcatctccgccggctggctgcacggcccgtacgcgcatccgcccatcctctcggccttgcgccattag</cdnaseq>

Protein Sequence

<aaseq>MGNYSPSKPVAFLLLLLLFGCLHYAQANPGHRRPKIDSVFSFGN SFADTGNFVELAAPLLPIMPFNNLPYGETFFGHPTGRATNGRIIMDFIADEFHVPFVP PFLGQGRQNFTHGANFAVVGASALDLAFFLKNNITNVPPLNISLSVQLEWFQKLKPTL CQTAQECREYFKRSLFFMGEFGGNDYVFILAAGKTLEELVPYVPKVVQAISAGIEAVI KEGARYVVVPGELPNGCVPIILTLYASKSRGDYDARGCLKKQNALARYHNSALFEAVS RLRHRYPWVKIVYADYYKPVIDFIKKPARFGFNGSSTLRACCGAGGGPYNYDATAACG LPGAAACPDPAAFISWDGIHLTEAAYARISAGWLHGPYAHPPILSALRH</aaseq>

Gene Sequence

<dnaseqindica>1..277#371..589#682..830#980..1253#4345..4577#atggggaactactcaccctcaaaaccagttgccttcctcctcctcctcctcctcttcggttgcctgcattacgctcaggcgaaccccggccatcgtcgtcccaagatcgactccgtcttcagcttcggcaactcgttcgccgacaccggcaacttcgtcgagctggccgcgccgctgcttcccatcatgcctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgctaccaatggccgcatcatcatggacttcatcggtacaacatacaaatgaacatacagtaatttcagtttgctttcagttctgattcaaatgaacatacagtaatttgctctatccaactttgcagctgacgagtttcatgtgccgttcgtaccaccgtttcttggccaaggtcgtcagaacttcacccatggcgctaacttcgccgtcgtcggtgccagcgctcttgatctcgccttcttcctcaagaacaacatcaccaacgtgcccccgttgaacatctccctgagcgtgcagctggagtggttccagaagctcaagccaaccttgtgccaaacagcccaaggtacgtatttttgttgtcttgatcactcgattcgatccattgctgaccggatttaattaatctgaactttttccttgctcgttcttacacagaatgcagagagtacttcaagagatcactcttcttcatgggagagtttggtggcaacgactacgtcttcatcttggccgccggaaaaaccctcgaggaacttgtcccctacgtgccaaaagtcgtccaagccatctctgcgggcatcgaggtcgtacactcgtacattttgaacgattttacaatccttaaaaaaaatgaaacaattttcacaatttacaggccgccgtaaaattttctcttacaatttacacagagctaacacttccgctgtcgcgtacgaataatattgtcattcaggcggtgataaaggaaggagcgagatacgtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccggccagattcggtgagtccgttggttcaatggttaattaattcttccccttaattgcacatgcgcttttagaaatgctatctactcaattactcaccatgatcatcacagtcctcaccatgaacaagttgcattgtttgactttgcacgtgttaaaagaaaactagctaatggattttttcgcataatttttaccaagctgcttgatttcaaaattaaagtggaatggatgtacaattcacatcttctatttttacaggtatatatttgtattagtatataatttattttaaaagtgaattgggtttaatatacaactcttttcttctatttacacacttccaattgttttttttttggattatatggtagacgcatgacgcacatacaacactatacttactcacctgcgaatgagtcctataacacacacacactcaaaagagaccaaaaccagtagtatatatccctgatgttactaattcatattaaaaaatccaattacgtgtgcatagacttattttggagggcgaaatcatacaaccacaattccaccaatacacgattgatgcttctcctacttccagttgtatttttatgatcattatttttcttgttctctgggtgtgtttagttcctgaaaaaaagttggaaatttgaggaaagttgggagtttggaaaaaaagttagaaatttatgtgtgtagaaaagtttttatgtgatatgatgtgatggaaagttagaagtttggggtagttgagagtgaactaaacacggcctctattaacgtgagaatttcatgagtggaaatatggttactctacactgaactaagttttaaaagttgaattggatttcatactcatagctctggaaatattgtgcaatgctagtttttaaaagtagaggtggacttgatatatgtacaatcattaacttgtttttccataaatacaattgtacttgtatacactataatcggtctgaacccactatatgtacatcgattggtgtaaatgtttctctttttcttggatcattaatgtactaataaggtcgtctctagagcaaacattatgctaaactttcttctgataataatttaataatatgatcgatacacagactaacttggccatttcaagatctagcaatgcctctacaaattggaataagtaaagtagacacgttgcccatagtaaacgcttcgtgtactatgtacgtagactatcccctaaacggggttgaagtcgtgaagataatgccaatcgttgaattcacccattcttaaactcatcgtggcaataatccaaaattgacaactacggtctcatcgtgatcgatcaggacttaattggacttctttcgtagccgtctagctctcttgtgatcgaaccagctatagcatgtgctactccatctgtttcatattataagtcgtttgactttttatttagttaaactttgttaaatttgatcaagtttatagaaaaaatagttatattaaatctaatattaaatatattttgataatatattttttctgtgttaaaaatagtactatatctatatatatatatatatatatatagtaaatttgtttggtgctccatggtgcccgggcaccattgttgaaattgagtatatacccaattcaaatgagcatgaaactttttcaattatttaggtattaatattaactactttactaactagttgaaagcaagtttgaactgaatttgaacttgtttttgttagattttgattctaggtatatagcatccatacatataattagttaggtatgtaatcatggattgtgaaataaagttaaatttgagttgttttgttgataggtataggtatgaatcgaattcttataactaggtatatactcacaatttgaaaattttaaaaaatttgagtgattttgtgcatttgaaaccatggtgcccgagcaccatggtgccccatatgagtgtcctatatatatatatatatatatatatatatatatatatatatatatatatatatatacctaataaaaaaatacgtaaggattcccgtatttcttcgtccgtcatcccacacacgcgccactaaaatctgttttaatccgagttgggtcggtccgtttttattgtatttgcaaaaccgcagttgatatagtatatgtatcttccatgtaatcgtataacacaagtggtaatttgcctgcttggtttatgtggaaaatcttcaatctggccactagggttcgactcccacctttcctctcattttacacacacctattattacttgctctgcatgcggtctctcctgtaataagtctatccctcgtgtactgtgcctataggacctccttgcctaacgggtcgggccgacgcacgttgttttggcccttattcttttttcccttattttttcacccaaaaatcattaaatgtttacataaaaaaaatttaatcactttgaaccattattttaagatataaaattgctgtaaattttgcatgtgcgttttaatttatttctaactaaatggaacccacgtgaagaaaaaaaaaagtaagtcttcgggtaaagtttttttcatcgttcatcacacgcggaatcaccttcttatatttcggcaataatttgtttttttataacgagggtttgttcagattgtagccaaaataaaccttactaaattttggcatgatattttatgtatttattagagtatgataaaaaactaaatggatacacatatttggtaactttactaaaatttgataaggtttatttaagatacaatctgaacaggccctgacatcagtttcctaatatgcaaaagcgatataaaatttcaagatttggaaggcatgtacaaatttgaaattttgtacacatgtatcatacaagtacacaagcaatattagcaatccatatttgtttgatattcacccgttgcaacgcacgggcatatttactatttattgtataaatttgatcaaattcaaagaaatttggttagaaaaaagttaaacgagatataatatgaaattgatggagtaatacccaggggcctgatcggttactgacgctgcaggattcaacggctcgtcgacgctacgcgcgtgctgcggcgccggcggcgggccgtacaactacgacgcgacggcggcgtgcgggctccccggcgcggcagcgtgcccggacccggcggcgttcatcagctgggacggcatccacctcacggaggcggcctacgcccgcatctccgccggctggctgcacggcccgtacgcgcatccgcccatcctctcggccttgcgccattag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0216900, RefSeq:Os01g0216900