Os01g0217000

From RiceWiki
Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0217000| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001048937.1 GI:115435287 GeneID:432...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0217000

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001048937.1 GI:115435287 GeneID:4324576

Length

3777 bp

Definition

Oryza sativa Japonica Group Os01g0217000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6386671..6390447

Sequence Coding Region

6386980..6387280,6387665..6387823,6387905..6388080,6389273..6389456,6389545..6389859
,6390239..6390291

Expression

GEO Profiles:Os01g0217000

Genome Context

<gbrowseImage1> name=NC_008394:6386671..6390447 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6386671..6390447 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctcatcaggcggctgatcccatccggattccctgcaattctcagaaggaggatgaggggccgggcggcggtgttcgcggcggtgctggtcgtgttcctggtggcgtgcaccgccgcggcggcggcggcggcgattaccatatcgaggaagcaccagcacaggccggcgtccggggcggcggcgaaggcggcgtgcgacgtgttcgcggcggggagctgggtggtggacgagtcgtacccgctctacgactcggcgacctgccccttcatccgcgccgagttcgactgccgccggtacggccgccccgacaaggagtacctcaagtaccggtggcagcccagcccgccgtgctccacgcccaggttcgacggggtggcgttgctgaggatgtggagcgggaagaaggtgatgttcgtgggggactcgctggcgctgaaccagtacgagtcgctgctgtgcatgctgcacgccgccgcgcccaacgcccggaccaccgtcacgccggcgtcggggaaggtcgatcccctcaccaccgcccgcttcgaggagttcaacgtgacgatcgtgtactacctgacgcactacctggtggacattgtcaacgagaaggccgggcgagtactcaagctggacgccatcgaccaggcacgcaactggctcagcgccgacgtgctcgtcttcgattcctggcactggtggccgcgctccggcccgacccaaccatgggactacatccaggagggcaacacggtggtgaaggacatggacaggacggaggcgttcagcaaggcgctcaacacctgggctagatgggtcgacgccaacctcctccagaccaacaccagagtcttcttccagggcatctccccctctcactacaggggccaagattggggcgacacggcgagtgcgacgtgcatggggcagacgcggccggtgaacggcacggcgtaccccggggggccgatcccgcagcaggcggtgctgaggagcgccctcgccggcatggcgaagccggtgtacctgctggacttcacctacctgtcgcagctgaggaaggacgcgcacccgaccaagtacaacggcggcatcttcggcgacgactgcacccactggtgcgtcgccggcctcccggatacctggaacgtcctcttctacgccgcgctcaccggccagcactga</cdnaseq>

Protein Sequence

<aaseq>MGLIRRLIPSGFPAILRRRMRGRAAVFAAVLVVFLVACTAAAAA AAITISRKHQHRPASGAAAKAACDVFAAGSWVVDESYPLYDSATCPFIRAEFDCRRYG RPDKEYLKYRWQPSPPCSTPRFDGVALLRMWSGKKVMFVGDSLALNQYESLLCMLHAA APNARTTVTPASGKVDPLTTARFEEFNVTIVYYLTHYLVDIVNEKAGRVLKLDAIDQA RNWLSADVLVFDSWHWWPRSGPTQPWDYIQEGNTVVKDMDRTEAFSKALNTWARWVDA NLLQTNTRVFFQGISPSHYRGQDWGDTASATCMGQTRPVNGTAYPGGPIPQQAVLRSA LAGMAKPVYLLDFTYLSQLRKDAHPTKYNGGIFGDDCTHWCVAGLPDTWNVLFYAALT GQH</aaseq>

Gene Sequence

<dnaseqindica>3168..3468#2625..2783#2368..2543#992..1175#589..903#157..209#agtgttctccatcagtagcagtatcagacaacacttcttccactcactcaataataagcagcagcaacactactctaatcaatactcaattctacacttgtactactacatcagcagcagtggactagctggaggaagaatccattgttcataagcatggggctcatcaggcggctgatcccatccggattccctgcaattctcagaaggtttggccgttttttactgccaatcagtgagtgaaatcacgcgcataataaaccagtcagtgagcgaaatcagcagtcatcaatggatgaaatccctaccatttactctgcttcttccagtgattcctccctttggaccctagcaaatccatgcacatgtggtggtcacccttgtgcagccatggatggaaaaccctcctaccataaagaaagcgtatcaagccaccctacatatattgtcacattccgcctcccacctcgtcacacttcccgcgactccgcgctcacaagaaccggccatttcttggcagcttcttcttcttcttcctcctcgcgctcgctcacctctccattgttgtcgattgtgttgtactggtaggaggatgaggggccgggcggcggtgttcgcggcggtgctggtcgtgttcctggtggcgtgcaccgccgcggcggcggcggcggcgattaccatatcgaggaagcaccagcacaggccggcgtccggggcggcggcgaaggcggcgtgcgacgtgttcgcggcggggagctgggtggtggacgagtcgtacccgctctacgactcggcgacctgccccttcatccgcgccgagttcgactgccgccggtacggccgccccgacaaggagtacctcaagtaccggtggcagcccagcccgccgtgctccacgcccaggtcggtaatggtggcggcggcgactcacctgtgttagctgtatatctccgcgtgtttgtgagaattctcgccggaaatttgggtgcaggttcgacggggtggcgttgctgaggatgtggagcgggaagaaggtgatgttcgtgggggactcgctggcgctgaaccagtacgagtcgctgctgtgcatgctgcacgccgccgcgcccaacgcccggaccaccgtcacgccggcgtcggggaaggtcgatcccctcaccaccgcccgcttcgaggtacacctcccctcccctccctagctagtcccttcccttcttcacgaaaccgacggctatggcggttggagccctggggccgcctcaccatgatgagcagtgagccagtgaccaccaccaccaccaccagctgcttagtgcgacgtgagccgctcgcgtcgcgacatgaccatggctttgctcgtcgcggtgaggagaattggatggcggggagtgtggccggagaggcgccgcgcgtgcgcgccaccggggcggcgggcacgggcatggcggggtgattgatacggacaacggctgcgctggcattgtccgtcgcggcgcgcgggatgcggaagtcaatggaaataaaggccaaagtttaattgggtctcttgcggtcgccgcgaggtctcgcaccgcgccgcgcacatcaaattctgcggttttctctctggcgattttgactgccccgcgttggcgtttctttcttgttttccgtttcctcttggagaaaaaacaaggtagagagcggacagacagagcagtctagcacaaacacaagagctgacacaaagtgagctggcctggacgatttgctgcctcgctgtgtgcatgcttgctgttgctggtggtggcgctggtgttgtttgatgtatctatcacgacagatctcgcgtggcgatgttcgtggtaggtgtgcacaaaatctgcacggcaaaaagtaaaactagtactaacattgccactgactgttccgtttggttgggggctctgcctccgatctcctcgttaaacttgcccctgtgtgcgtttcatgtgtccgtgtcaggccgtgaggtcctgaaaatattgatcagccagtgtcccttcttggccctttttgctggcgtccagctcttgggcgttatttcgcgcagacacgtacgtacgctcgccgacgcgcccgcgaccgcgcgtgcattttcggtggttgcgctgccgtttttagcactgttttggtaggtcactcttcaatggcgagacggacacaagtagcgtgacaactgacatcgtccaaagccttagaatgtgtagtaatacactagtacgaatgtacgatgtcctggctggctgtggctgtgaggcgttctgttgctgcgcacacattgttgtgccagatgggttggcggctgaacagccagggtatctgagtatctgactctgggatatgcaggagttcaacgtgacgatcgtgtactacctgacgcactacctggtggacattgtcaacgagaaggccgggcgagtactcaagctggacgccatcgaccaggcacgcaactggctcagcgccgacgtgctcgtcttcgattcctggcactggtggccgcgctccggcccgacccaaccgtgagacctcctcctcaatcttcaaattctgcaggtttggttcgctttgtgacatactgaaaattgctgaatttgctgcagatgggactacatccaggagggcaacacggtggtgaaggacatggacaggacggaggcgttcagcaaggcgctcaacacctgggctagatgggtcgacgccaacctcctccagaccaacaccagagtcttcttccagggcatctccccctctcactacaggttaaacatctgattctgcaatgaactctgcgacaaattgtcatgcagtagtaacatactcctagctaagaccttgtttagatccaactctaaaactttttaccctgtcacatcaaacgttcgaacatttacatgaattattaaatatatgcttaaaacaataattaattgcacattttgcgactaatttatgagataaatttttaagcctaattgcttcatgatttgataatttggtgctaaaataaacatttgctaatgatagattaattaggcttaataaatttgtctcacggttttaactgtaattagttttttttattagtgcaagctaaaaactttatacccctggatctaaccaccctgtaaattgctgcaatgcaggggccaagattggggcgacacggcgagtgcgacgtgcatggggcagacgcggccggtgaacggcacggcgtaccccggggggccgatcccgcagcaggcggtgctgaggagcgccctcgccggcatggcgaagccggtgtacctgctggacttcacctacctgtcgcagctgaggaaggacgcgcacccgaccaagtacaacggcggcatcttcggcgacgactgcacccactggtgcgtcgccggcctcccggatacctggaacgtcctcttctacgccgcgctcaccggccagcactgatggccggctgctgacctgctgtcatcacggccggtgatatgattgagataggatatagtggaaataattaatcaacaggaaaaaagaattatagatacagattgattttatataggtctatatggaaagaatttttctcgaaaaaaaagaaacagaagattattgttaccaaagtgacagaagaaatgcctgattctctctcagaaatgggggtgaattaaagatgctgtaattggttggcaaagaaggataagaaagaattaattgttctcatgtggttataaagataaacagattgttttggcagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0217000, RefSeq:Os01g0217000