Os01g0217800

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0217800| Description = DJ-1 family protein| Version = NM_001048942.1 GI:115435297 GeneID:4324581| Length = 3316 bp| Definition = Oryza sat...")
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Gene Name

Os01g0217800

Description

DJ-1 family protein

Version

NM_001048942.1 GI:115435297 GeneID:4324581

Length

3316 bp

Definition

Oryza sativa Japonica Group Os01g0217800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6431316..6434631

Sequence Coding Region

6431571..6431897,6432336..6432485,6432594..6432776,6433285..6433365,6433626..6433829
,6433913..6434053,6434250..6434450

Expression

GEO Profiles:Os01g0217800

Genome Context

<gbrowseImage1> name=NC_008394:6431316..6434631 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6431316..6434631 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcggccgcttccgcctccgccatggcgaggcgggccgcttcgtggccacggctcctcctcctctcccgcgccttcgccgccgccgccgctgagccgaagcgggtgctcgtgccggtcgcggacggcacggagccggtggaggcggccgccaccgccgacgtgctcaaccgcgccggcgcgcgggtcaccgtcgccacggctgaccccgcgggcgacgaccgtggcctcctggtggaggccgcgttcggggtcaagctcgtcgccgacggccgcgtcgccgacctggaaggcgaggcctttgacctcatcgccctacccggaggaatgccgggatcagctaacctcagagattgcaaggtgctggagaagatggtcaagaagcaggcagagcagggtggcctctacgccgccatctgcgccacgccggcggtgacgctggctcactggggcttgctcaaaggcttaaaggcgacttgctatccatcattcatggagaagttcaccgctgaaattatccctgtgaactctagggtggtggtagatagaaatgcagtgaccagccaagggccagcaacagcaattgaatatgctctcgctttggtggagcaactgtacggcaaagagaagtcggaggaggttgcaggacccttgtatgttcgtcctcaacctggggttgactatgtcatagatgagttcaattcagttgagtggaaatgcagtggtacacctcaggttcttgtgccagttgctaatggttcggaggaaatggaagctcttaatttaatagatatcttgcgtagagcaggagcaaatgttactgttgcatcagttgaggataagttgcaagttgtgacccgccgccacaaatttaacctgatagctgatattatggtggaagaagctgccaaaagggaattcgatctgattgtcatgccgggtggtctgccaggtgctcaaaagctttctagtacaaaggtacttgtagatttactaaagaaacaggcagaatctaataaaccatatggtgcaatatgcgcttctcctgcttatgttctcgagccccatggtttactgaaggggaagaaggcaacatcatttccaccaatggcacacctgcttactgatcagagtgcatgtgacagtagggtggttgttgatggtaaccttatcactagcaaagccccaggctccgcgacagagttcgcgctagccattgttgagaagctgtttggtcgagagaaagcggtcagtatagcgaaggagttgatttttatgtga</cdnaseq>

Protein Sequence

<aaseq>MAMAAASASAMARRAASWPRLLLLSRAFAAAAAEPKRVLVPVAD GTEPVEAAATADVLNRAGARVTVATADPAGDDRGLLVEAAFGVKLVADGRVADLEGEA FDLIALPGGMPGSANLRDCKVLEKMVKKQAEQGGLYAAICATPAVTLAHWGLLKGLKA TCYPSFMEKFTAEIIPVNSRVVVDRNAVTSQGPATAIEYALALVEQLYGKEKSEEVAG PLYVRPQPGVDYVIDEFNSVEWKCSGTPQVLVPVANGSEEMEALNLIDILRRAGANVT VASVEDKLQVVTRRHKFNLIADIMVEEAAKREFDLIVMPGGLPGAQKLSSTKVLVDLL KKQAESNKPYGAICASPAYVLEPHGLLKGKKATSFPPMAHLLTDQSACDSRVVVDGNL ITSKAPGSATEFALAIVEKLFGREKAVSIAKELIFM</aaseq>

Gene Sequence

<dnaseqindica>256..582#1021..1170#1279..1461#1970..2050#2311..2514#2598..2738#2935..3135#agtagtacagcgcacaggccacgcgtgcgcgtccaccgaaacagcggcggcgacgacgaggcgatcgattcctggacactcgcgccacgccaccccactgtccctgcacgctgcagctacccctactctaccactgccctctccggcagggaagcgaggaagaggcacgcaccacgaagtcgccacctcgatttttccggcgaacgacgcaagaataacaccccccccccccttacctacggggatagtgatacgatggcgatggcggccgcttccgcctccgccatggcgaggcgggccgcttcgtggccacggctcctcctcctctcccgcgccttcgccgccgccgccgctgagccgaagcgggtgctcgtgccggtcgcggacggcacggagccggtggaggcggccgccaccgccgacgtgctcaaccgcgccggcgcgcgggtcaccgtcgccacggctgaccccgcgggcgacgaccgtggcctcctggtggaggccgcgttcggggtcaagctcgtcgccgacggccgcgtcgccgacctggaaggcgaggcctttgacctcatcgccctacccgtgcgtccaccctttactcctaaaattacttccttttttttctcccccttaacaactactccctccgttgctccctccgtttcatattactagtcgatttaacttttgcaaacatttttaagtttgaccaaatttatagaaaaatataacaatacgaagcaaacgtattatgaaaatatatttaacattacatttaattgaactaatctagtgttccagatattgctaaatttttcattaaatttggtcaaacataaagaaatttgacgaagaaaaaaaaaggtcaaagtgacttataatatgaaatggagggagtactaattctgctttactgtgccattgattcgcgctctgtgaggatgttcttgcttaataagagagaacttgtatggactagcaaaagtgtgacaattcagtgatgctggttacttggtgtagggaggaatgccgggatcagctaacctcagagattgcaaggtgctggagaagatggtcaagaagcaggcagagcagggtggcctctacgccgccatctgcgccacgccggcggtgacgctggctcactggggcttgctcaaaggcttaaaggttgcaacatggatcatcattcagtcagggtcaattcactgttgcgggggtggttttgttggaaatatgtatcatgttgagagacagatatgatttttgttatttcaggcgacttgctatccatcattcatggagaagttcaccgctgaaattatccctgtgaactctagggtggtggtagatagaaatgcagtgaccagccaagggccagcaacagcaattgaatatgctctcgctttggtggagcaactgtacggcaaagagaagtcggaggaggttgcaggacccttggtaagctatatagcctgtaagccatcacatacttgtttttttttacttctatctgctatgttaggtgatatgatattattaccaggcgatgatctcaaagagatgtttatgggctgttggattttcctaaaattctgcctgcagtgattcaatcaattatctgagtgatttatggtttctaactagttgacataattataatcatactgaaatttagagtaaggcaatatgtcgcaatcttttaggacatttttttttccgaacgcgcaaaaggattgcacgtcaatatattagcaggaaaagagtttttgttacacatttaggacatttaattgttactgtaatctctcccttcaaatcttaatacaaatgatacgcaatgcttatgcgtgttccctaaaaaaagttacttttgctgagttcactcgaattgttttcgtgcatattgtatcaacatcagctgcttaaattaacattgcctaatgattgtgtggttcttctaattcagtatgttcgtcctcaacctggggttgactatgtcatagatgagttcaattcagttgagtggaaatgcagtggtacacctcaggtatgaaataaaattgaatccttttgttaaaaaatgcctccttatatacatttttaaggttgcatgaataggttcttgtcccatggcacaggtcttcgcctgcttaaaaatgttttagctgttgctatgaaattctgtcatttttttttcgccgggctgcaggaaggaatccctggtcagggtttattaagtaagcataaggtgtgatttacatgactcaacaaccatgctagcacttcccttttttgggtcttctgcaggttcttgtgccagttgctaatggttcggaggaaatggaagctcttaatttaatagatatcttgcgtagagcaggagcaaatgttactgttgcatcagttgaggataagttgcaagttgtgacccgccgccacaaatttaacctgatagctgatattatggtggaagaagctgccaaaagggaattcgatctgattgtcatgccggtacattccatagctagagttactttttgattgatctggtgttgatcttttgaatacttcgctgatactggtgtcatatatagggtggtctgccaggtgctcaaaagctttctagtacaaaggtacttgtagatttactaaagaaacaggcagaatctaataaaccatatggtgcaatatgcgcttctcctgcttatgttctcgagccccatggtttactgaaggtattcccctttatatgtgcatgagtgttaatccctctcggtagtcagctcttttttttttggaacaaattcagtagtcagctccataggcatataaatgattattcctcaaagtagcagattaaccatcaagctgtatttccttttgaaaaaaaactgtcaagctgtattaacatagatgtttccatcattttaggggaagaaggcaacatcatttccaccaatggcacacctgcttactgatcagagtgcatgtgacagtagggtggttgttgatggtaaccttatcactagcaaagccccaggctccgcgacagagttcgcgctagccattgttgagaagctgtttggtcgagagaaagcggtcagtatagcgaaggagttgatttttatgtgattatacacttgggcatttatgcatcaggtgcctgtcacctgtgagtgatgcttctgtgaataactacttatgctgctttcctaggaatgcataatataagcctatagcagcatgtggcaatccatgtgaatgaggaataaatgtacattatgagtatcatgtgtaaagagtcgtcgttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0217800, RefSeq:Os01g0217800