Os10g0472900
| Gene Name |
Os10g0472900 |
|---|---|
| Description |
Very-long-chain 3-ketoacyl-CoA synthase family protein |
| Version |
NM_001071366.1 GI:115482475 GeneID:4348874 |
| Length |
7289 bp |
| Definition |
Oryza sativa Japonica Group Os10g0472900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:18021379..18028667 |
| Sequence Coding Region |
18023698..18024269,18027350..18028175 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:18021379..18028667 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:18021379..18028667 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggtggcgacgatgctgacgctgacgctgctggcgtactcggcggcgatgctggcgcggctgctggtggcgcggtcccggcggcggcggtgctacctcctcgactacgtgtgctacaaggcgaccgacgaccggaagctccccaccgacctgtgcggcgagatcatccagcggaacaagctgctggggctggaggagtacaagttcctcctcaaggtcatcgtcaactccggcatcggcgaggagacctacgggccccggaacatcatcggcggcggcgacgcccgccccgaccgcctcgccgaggggatggaggagatggacgagacgttccacgccgtgctcgacgagctgttcgcgcgctcgtccgcggcgggcggcggcggcgtccgccccgccgacgtcgacctcctcgtcgtcaacgtgtccatgttctcgccggcgccgtcgctctccgcccgcgtcgtgcgccgctacaacctccgggaggacgtgaaggtgtacaacctcaccggcatgggatgcagcgccaccctcatcgccctcgacctcgtcaacaacttcctcaggacgcacgcgaacaaggtggcgctggtgatgacgtcggagtcgatcgccccaaactggtacgccgggaacaagcgcagcttcatgctgggcaactgcctcttccgctccggcggctgcgcctacttcctcaccaacgacccccgccaccgccgccacgccaagctccgcctccgccacctcgtccgcacccacaccggcgcctccgacgacgcctactcctgcgccctccagatggaggacgacgccggccgcccgggattccacctcggcaaggacctcccccgcgccgccgtccacgccttcgtcaagaacctccgcctcctcgccccccgcgtcctccccctccccgagctcctccgcctcgccttcgccaccttcctctcctccggccgccgcagcggcggcaagaagacctcgccgtcgcagcagccgctcaccatccgcatgaaggccggcgtcgaccacttctgcgtgcacaccggcggcgccgcggtgatcgacggcgtcggcaaggggctcaccctgacggagcacgacctcgagccgtcgcggatgacgctgcacaggttcgggaacacgtcggcgagcagcgtctggtacgtgctcggctacatggaggccaagcgccgcctccgccccggcgaccgcgtcctcatgctcaccttcggcgccggcttcaagtgcaacagctgcgtctggaccgtcgagaagcccgtctccgacgccggcgtctggaaggactgcatcgaccactaccctcccaaggagctcgccaaccccttcatggagaagtacggcttcgtcaaggacatgatgaacttgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MEVATMLTLTLLAYSAAMLARLLVARSRRRRCYLLDYVCYKATD DRKLPTDLCGEIIQRNKLLGLEEYKFLLKVIVNSGIGEETYGPRNIIGGGDARPDRLA EGMEEMDETFHAVLDELFARSSAAGGGGVRPADVDLLVVNVSMFSPAPSLSARVVRRY NLREDVKVYNLTGMGCSATLIALDLVNNFLRTHANKVALVMTSESIAPNWYAGNKRSF MLGNCLFRSGGCAYFLTNDPRHRRHAKLRLRHLVRTHTGASDDAYSCALQMEDDAGRP GFHLGKDLPRAAVHAFVKNLRLLAPRVLPLPELLRLAFATFLSSGRRSGGKKTSPSQQ PLTIRMKAGVDHFCVHTGGAAVIDGVGKGLTLTEHDLEPSRMTLHRFGNTSASSVWYV LGYMEAKRRLRPGDRVLMLTFGAGFKCNSCVWTVEKPVSDAGVWKDCIDHYPPKELAN PFMEKYGFVKDMMNL</aaseq> |
| Gene Sequence |
<dnaseqindica>2320..2891#5972..6797#aagttgtgaatactatgttaatatatgcgcacaaactataaggtagcagcactgaattgctatactgcatgctgaagaacatggcgagcacctgactaaacactgcaagcgagagcagcacagaattaacttagctagctagccaagctcgatcagtcaagctggaggacgaattgtgggtgccatcacccaagtaagtatatatatctatatatatgttcactgcgtcgagcttattcgggttaattgattgggaattgggattgaaacctcaatttttggcctgagcccccaaaaaatcctggaaatggtatagatattaggatttaacggtgtgaaaattcatgtcaggattgtgtttgcactcatttgtttaaccgaaaatgtgaaacttcatgtcaaaacagggacaaaattcatgttaaaaggcttgatatcaaaataagggtaaaaatacaaagtcctcagaaaagtaggggcaaatctataaatataacgactgtatgtctttgacactggaatagggtaaacacaaagctttagttaaaaaaaatgaatacaatcacaaaattgtaaaagtaaatgtaaaatcaccattgaagtttaatttaaaacatggataagaatatgattgtccctataatatcaacaagctttctacataatattatttgaaaatattactagaatggtacgtaggtctggttgaaaatggtaaaatgttagttttttttttctttgggtcggcttggccttgacaatttaaattgagcccgtgcattttcaaactaccgtgcccggggtttaatgaaggttccaaaagcattcagtcaccaaataccgctctcaagcggttttattgataacggtgataaatgctctgttacaacaaaaaccggtaaaatttagataaattttgctagaattttaaatttgaatttgaattttgaaattggcaggttcaccaagcagtttctcaattcttccagatactaaaggggcagcaacagcgataatcgagtggttaccattgtattttcaaaccctgcagtgcattgaacaagtttgcacccccaagtgctttttcctcgacttaaatttgagtatatatatatatcgcagtggatcatggaaatcatgttttgcttgattttgtatgtttggtacctaaaatagtcctctgcctttcccattcgacactaagtttgaaacatatatattgttgctcgtagggtatatatatatagatgaaattaatgtagtgggacacaaaaaaaaaggtattttgtgtgacctaataaaacattattatcaaaattaatatattttgtatatgtccacaaatgaaggaagacttaagtccccgttcttttatcattacagacaccaaattatgcgaggcacactttccaaacactctcgatttttgagaaaactttcttcatcagcatttcttgaaaaaaaataccttttctaaatcaacttaagttatacggtggttctctcaaactcagtttcacctattaccatttttaaacatgctcttaggttaagtttggtagacaacagccctgacctgcataccttgttggtctcttcatcctaaaaatctaaagatcaatcataaatattcatatttttttaaaaaaaaaaggtaaggaggagtacttaagggtagtggtgtagttacatatatatatatatatatatatgactattcaccaatatttaaatccgtgtctaaattttgcgcgcatgcacgtacattttctatagactctaataacaatctccgtaaggaaagaaacattgtgtttggtgtacacgtcgtctttcattaaaaaataattttgaagacaaaaggttgaaaataaacctgcactactaattttaatttaaatgaaaaaaaagaatcttctcatgagccatgcatgatccctctttattttttcaataaaataaaataaagatccatgagccactccaccttagctcctataaagactccccccctctcccctcccctttcctctaaaccccttccaataatccctcaccaacccatacccccacactccctctcacactccactctagctagctaagctaccttcttactccatttgagcaaaccaaagctcatctagagagagagagagagatctagagagagaaaccagcaaccactcttcctccatctccatgagcaagagaccagatcgttcgttctagattgttctagctagatagcttcatcgtcaaccttggcaacgccaagaaaattaaccagcaagaacacaagaagcggcggcggcggcgatggaggtggcgacgatgctgacgctgacgctgctggcgtactcggcggcgatgctggcgcggctgctggtggcgcggtcccggcggcggcggtgctacctcctcgactacgtgtgctacaaggcgaccgacgaccggaagctccccaccgacctgtgcggcgagatcatccagcggaacaagctgctggggctggaggagtacaagttcctcctcaaggtcatcgtcaactccggcatcggcgaggagacctacgggccccggaacatcatcggcggcggcgacgcccgccccgaccgcctcgccgaggggatggaggagatggacgagacgttccacgccgtgctcgacgagctgttcgcgcgctcgtccgcggcgggcggcggcggcgtccgccccgccgacgtcgacctcctcgtcgtcaacgtgtccatgttctcgccggcgccgtcgctctccgcccgcgtcgtgcgccgctacaacctccgggaggacgtgaaggtgtacaacctcaccggcatgggatgcagcgccaccctcatcgccctcgacctcgtcaacaacttcctcaggtttgatttgattataattaaatctctcctcttcttctctccaggtttaattaatcttgttcttggtattatgctatgttttcaaatgcttgtcaatatatagtttctcatatttaaattttaaatcatttgtttttaaaagatgtcgtattattaaagcatacgtacgttgtatacttaaacatgagacatcgtacactctggcgatctaaaaattaattactagtgacagtgctggtcaacagtgacgaggattatttgggaattaaggatggtataaaaataccattgtattctctatttgcagctgaaaaaaatcacaaaagtacaatgcatttgattctcaatttacaaactgaaaaaaaaatcaaaatgaaaaaaataccgggatcatcataaattcgctgcaccgctggatcgatcgttcttgattgatccaacggccggtacacgtgtggggatggtttgaagtacatggttaatgttgtgcaggtagctcaagaaagccttgagttgggtttacctgtcagtaaaaatggtccctacaaacaagtgatcatcagtaatttctagcgatgcttttgtctactgtgcatcatgttctctggtcacacgccattcaatcggtccgagctactaccacgatcagatcgaagagttattgcatgcgtttcctttttcttttatttgtcatgggtttttattttttcttttctgattatatatatagaataacacaacaaatatatagtaccaattatatgcatgcactttatatgctcacaagtacacaaccatggttagtcagtgatacagctgtttagataatggagctagttagtactactgcttaattaagttaggtctctttctgttacctttctattttttgtgcagaaaaaagaaaagagctcctgaccaattttagctatcacttcccccaaaaaagcgcagtactgaaattaattaccagtggtggttaggaaattaattaagaaactgtgtgaaagtaggaataaaatgaagaaaggagccgaggtaaaaaaaagagtacacaccaaattaattagatgtttacaaacattttacaaattaatcacaattctcaaataaaagggagttatcccaactatccttattaaatctacttcatatggtgcatattagtaaactataaagatgcttgtgcatgtactattatcatttatcatacagcatgctacccttattaaatctactacaagtagtgcatattagtatactataaggatgtacatgcatgtaccattaccatttaggcattgtttagttccaaactttttcttcaaacttccaacttttccatcacatcaaaactttcctacacacataaactttcaacttttccatcacatcgttccaatttcaaccaaacttccaatttttgacgtgaactaaacacacccttattagaaggcacgaattttggtccattatatatatatacatatagagagatattcgttttgaaaatatcgtattagactgtttccgatcgtcaaaatattaagatttaattatgggcaaatgcataatagattttcttttcaggctttcagtctctccaccatgttttcataaatttcataaaaacctataataacatgaaggagaatacagtgatgattgttgtagtagaacagtagaagtacacactctttggtactacactccaatactccatcgctcatcgacagagaagtaaatgggatcgtgaagctagagctgcgctgcactggactgagctttcaaccacactgcatgtgagccagctgctctgctccatactgcccccatagcttaatactaacagctagctagctccttcttcttcctcctcctccattaatggcggctcagcaagtttggtttgcctttataagagcagctaccttacccctagcctagccaccctgtaagcagcaagcatcaatattgtactgacgtggatcatgtcttcttcttcctcctatggaacgtaggagtggtacagtacgtagtaatggtagatagacactgcctttcaccggtttgggcctttgggatccatggttgccggtttcagtggtgaaagccagtggcttttcagttggagaaaaatcggagagtatggttaccccaccgaccgtagtccgacctgacaggtcagcaaaagcgggcggtgaggtggcgcatgcgtggaaatggtgtgcccacgtgtataaagcatgggccgaggtttggtctaggaataacaactgagatctatcaattgacggagtaaaaaaaatatagaggtcaacagtttagatcgattgtccgtttgatctagttggtcaatatatttaagtttctaagtaaatgcaaggatttttatttttcttgtggagaaggcatttttctaaatttatttacatttagacaccaatacattatgtattggaatactattatgcctctatccagtctccatctctccgatcaattaacggatcaaccgatattgcaacaaaacatacatggcttgcattttaggattcatggtgcataatctccatgcatggatgaagtagtaatttggagtgtaaactttgaacatactctatctattcagacatatttgacatttagcataaatttcggttgaactaacaataacttttaaaatgcctatttttttattaaaaaaagtatatgtagattcaccatagaaatgtaagcagtaacattattataagctcattagattttgtaaacacattgtaataaaaaaatccacagtcaaattcttaaaaatctgactaattaaatcttattctaaacatgagatttgttttcttgggaacaaaataaaaggcccacccttttgcttattcctggaataagcgaaacgaagtgatctttgaataaacctttatatacatgttcttaacgatctaaaagcaaaggttgaagaataaacttcgatgaaaaaaaccttaaaatcaccttcaaatttaaggttaaaaatttaaattttggctgataagtagtataagcatttgttggaatgcatatggcaggacgcacgcgaacaaggtggcgctggtgatgacgtcggagtcgatcgccccaaactggtacgccgggaacaagcgcagcttcatgctgggcaactgcctcttccgctccggcggctgcgcctacttcctcaccaacgacccccgccaccgccgccacgccaagctccgcctccgccacctcgtccgcacccacaccggcgcctccgacgacgcctactcctgcgccctccagatggaggacgacgccggccgcccgggattccacctcggcaaggacctcccccgcgccgccgtccacgccttcgtcaagaacctccgcctcctcgccccccgcgtcctccccctccccgagctcctccgcctcgccttcgccaccttcctctcctccggccgccgcagcggcggcaagaagacctcgccgtcgcagcagccgctcaccatccgcatgaaggccggcgtcgaccacttctgcgtgcacaccggcggcgccgcggtgatcgacggcgtcggcaaggggctcaccctgacggagcacgacctcgagccgtcgcggatgacgctgcacaggttcgggaacacgtcggcgagcagcgtctggtacgtgctcggctacatggaggccaagcgccgcctccgccccggcgaccgcgtcctcatgctcaccttcggcgccggcttcaagtgcaacagctgcgtctggaccgtcgagaagcccgtctccgacgccggcgtctggaaggactgcatcgaccactaccctcccaaggagctcgccaaccccttcatggagaagtacggcttcgtcaaggacatgatgaacttgtgatcgatccatcaaattccccaattaattcctcgatcgatctctcaagaaccaatataatcaatcgatattgcatgtgcttgcttgcgtgcatggattaattaagcgatcggttagttaattaattttatcgccatttgctgcagctctgttgatgattaggatgaacattatatttacagggagggggaagaagaagtaagaacaatcaatgagttgaacaaaaaaaaaactaaggattcaattcataggtacatatagcagcttgtgattccataattttcttttcagcatggtggtagtatatggattttatttatttatcttattttttttgttgttgtttgtaactctctgtatgttgctagctacgagtgtcgtcctagctggtggcaggtgttgtgtctttcattaattgttcatggtgatggactatttctattcaaggatcaaattaaattatttttttttgaaaggaggattatttatcagttc</dnaseqindica> 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