Os10g0473400

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0473400| Description = Protein of unknown function DUF608 domain containing protein| Version = NM_001071368.1 GI:115482479 GeneID:4348876| ...")
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Gene Name

Os10g0473400

Description

Protein of unknown function DUF608 domain containing protein

Version

NM_001071368.1 GI:115482479 GeneID:4348876

Length

8151 bp

Definition

Oryza sativa Japonica Group Os10g0473400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18041759..18049909

Sequence Coding Region

18042151..18042409,18042647..18043928,18044085..18044146,18044286..18044358,18044576..18044643
,18045200..18045384,18045488..18045629,18045720..18045758,18045842..18045897
,18046180..18046233,18046856..18046959,18047189..18047289,18047894..18047967
,18048638..18048737,18048845..18048921,18049052..18049108,18049235..18049345
,18049431..18049511

Expression

GEO Profiles:Os10g0473400

Genome Context

<gbrowseImage1> name=NC_008403:18041759..18049909 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18041759..18049909 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagcggcaacctcttccactgccggaggaactcgtggccggccgaggagtacgtcggccgaaccgccctgcagttgttggacttcgacggcgggtcgcctccggagcaggcatggcggcggcgtctgaacagccacgccaacttactcaaggaattcagcgtcaccttcatggaagcaatgaggatgatgagccttggcctgaggctatggtcgtatgtccgagaggaggcttctcatggaaggaaagctccaattgatccgtttaccaaagagaaatgtaagccgtctgcttcgcagggcgtaccgcttggtgggatggggagtggtagcatttcaagaggtttcaggggagagttcaagaattggcatatcattcctggtttatgtgagacttccccggtcatggagaaccagttttcaatatttgtatctcgcgatggggggaacaaaaagtactcatcggtattgtctcccggacaccatgaaggtttaaagaaatgtaatgactctggaatttcttcatgggactggaacttgagcggtcaacattctacctatcatgctttatttcctagggcatggactgtttatgatggtgaaccggatccagaccttaaaatctcatgtcgtcagatatcaccattcattcctcatgattacaaagatagcagcctcccaacttctgtctttgtgtacactctagtgaacactgggaaagaccgtgcgaaagtgagcctgttaatgacatgggcgaattctatcggaggtttttctcatcactctggaggccattttaatgagcccttcattgcggaggatggagtttcaggagttcttctgcatcacaaaacagcaaaggataatcctccggttacttttgctattgctgcctgtgaaactcagaatgtgaatgtgacagtcttgcctgtatttggcctctctggagaaggccatgattcagccaagcaaatgtgggatagaatgaaacagaacggccactttgaccgtgaaaatttcgaagctggtaccagtatgccttcatcttcaggggagacactttgtgcagctgtctcagcatcaacctgggtagagccacatggtagatgtactgttgtatttggtttggcttggtcctctcctaaaataaagtttcagaagggctgcacatacaacaggaggtacactgaattttatggaacttctgaaagatcagctgttaatttggtacacgatgccttgacaaaatataggatttgggaagaggagattgagaagtggcaaaaccccatactcaagaatgaaaaacttccagaatggtacaagttcacactttttaatgagctttactttctggtagctgggggtactgtttggacagatggccaaccaccagttatcgatgaaaaaccaagtcctggttctaatcaacagaaatcttcaaaaaggggcactagagacactaaacaggaatcagttaaagataaccatgtcaaactgacagcagagcaagtcactaatggtggtgacctggctaatggcgaagagcaaagtgtgtcaaagtatgcagcagtacatggaccacaaatggctaaggcaaccaacggacttgggtcacaagagccaattccatacttgctttccaagaatggccctgaaaatgttggcaaatttttgtacctggaaggagtggaatacatcatgtggtgcacctatgatgtgcatttctatgcttcttttgctctgcttgatctgtttcccaaaatagagttgagtatccaacgtgattttgccaatgctgttctctatgaagacagacgaagaatgaaatttttggctgatggtacttctggaattcgcaaggtcaaaggtgccgttccgcatgacctaggaacacatgatccatggcatgaaatgaatgcgtacaacatacatgatacaagcaaatggaaagatctaaatccaaagtttgtgctccaggtatacagagacttcgctgctacaggtgatatgtcatttggtagagatgtttggcctgccgtctgtgcagtgatggactatatgaatcaatttgaccgtgacggtgatggtctcattgagaatgatgggtttcctgatcaaacctatgatgcttggactgtacacggaattagtgcttactgtggcggtctctggcttgctgcacttcaggctgcagctacaatggctcatcggcttggtgatcggccatttgctgaaaaatacaagctcaaattcatacaagcgaaagcagtatatgaggctaagttatggaatgggtcttacttcaattatgacagtggcacaagcagtaatagccgatctattcaggcggatcagctggcagggcagtggtatgctgcttcttcaggcttgcccccgcttttcgatgagaataaaataagaagtgctctgcagaaaatatttgaattcaatgtaatgaaggttaaaggaggacgattgggagctgtaaatggtatgactcctaatgggaaagtggatgagacatgcatgcaatctcgggaaatctggaccggtgttacatacggtgttgctgcaaacatgctgctccatggaatggagcatcaaggattcaccactgccgaaggaatttttattgctggttggtcagaagaaggatatgggtattggttccaaacaccggaaggctggaccatagacgggcactacaggtcgctcatctacatgcggcctctcgccatttgggcaatgcaatgggcacgttctccacccaaggcaatccttgatgcccccaaggtaaacctgatggacaggatacacctatccccacaaatgatccgggcaatgaacgagattaatgttagaaagatagcacccgacaatagatgtttccctagctctgcatttcgttgtgaatgctga</cdnaseq>

Protein Sequence

<aaseq>MVSGNLFHCRRNSWPAEEYVGRTALQLLDFDGGSPPEQAWRRRL NSHANLLKEFSVTFMEAMRMMSLGLRLWSYVREEASHGRKAPIDPFTKEKCKPSASQG VPLGGMGSGSISRGFRGEFKNWHIIPGLCETSPVMENQFSIFVSRDGGNKKYSSVLSP GHHEGLKKCNDSGISSWDWNLSGQHSTYHALFPRAWTVYDGEPDPDLKISCRQISPFI PHDYKDSSLPTSVFVYTLVNTGKDRAKVSLLMTWANSIGGFSHHSGGHFNEPFIAEDG VSGVLLHHKTAKDNPPVTFAIAACETQNVNVTVLPVFGLSGEGHDSAKQMWDRMKQNG HFDRENFEAGTSMPSSSGETLCAAVSASTWVEPHGRCTVVFGLAWSSPKIKFQKGCTY NRRYTEFYGTSERSAVNLVHDALTKYRIWEEEIEKWQNPILKNEKLPEWYKFTLFNEL YFLVAGGTVWTDGQPPVIDEKPSPGSNQQKSSKRGTRDTKQESVKDNHVKLTAEQVTN GGDLANGEEQSVSKYAAVHGPQMAKATNGLGSQEPIPYLLSKNGPENVGKFLYLEGVE YIMWCTYDVHFYASFALLDLFPKIELSIQRDFANAVLYEDRRRMKFLADGTSGIRKVK GAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNPKFVLQVYRDFAATGDMSFGRDVWPAV CAVMDYMNQFDRDGDGLIENDGFPDQTYDAWTVHGISAYCGGLWLAALQAAATMAHRL GDRPFAEKYKLKFIQAKAVYEAKLWNGSYFNYDSGTSSNSRSIQADQLAGQWYAASSG LPPLFDENKIRSALQKIFEFNVMKVKGGRLGAVNGMTPNGKVDETCMQSREIWTGVTY GVAANMLLHGMEHQGFTTAEGIFIAGWSEEGYGYWFQTPEGWTIDGHYRSLIYMRPLA IWAMQWARSPPKAILDAPKVNLMDRIHLSPQMIRAMNEINVRKIAPDNRCFPSSAFRC EC</aaseq>

Gene Sequence

<dnaseqindica>7501..7759#5982..7263#5764..5825#5552..5624#5267..5334#4526..4710#4281..4422#4152..4190#4013..4068#3677..3730#2951..3054#2621..2721#1943..2016#1173..1272#989..1065#802..858#565..675#399..479#gcggcttcgcctcgcctcgcttcgcttcgcttcgcttcggagtccagcctcctcctccgctgacctcctcgcggtcttctcgtctccgcgtggagcaactgcctcccgcggcggcgcgcgcgggtgggtggagactggagagtcctctccgcgagaggctgcccgcttcggtttggttttgatctggtttggttgaatcgatcgagaggtggggaggggaggggagcagagggcggcatcggatcggaggagggcgcgatgaggaggaggggcggcgctgggggatcggatccgcgcgcatgattgcggcgcggcgcgggaggggatttgttcgtggatcgtgcctccgatcggcgggagttggatcgggggcgtggtggcattgggggtgagacgggatggtgagcggcaacctcttccactgccggaggaactcgtggccggccgaggagtacgtcggccgaaccgccctgcagttggtgagtccaatttcttgttccttttgggcttgtgcttcctgtgggcgcgtgtttgattttgctggggatgctttggatttcgcagttggacttcgacggcgggtcgcctccggagcaggcatggcggcggcgtctgaacagccacgccaacttactcaaggaattcagcgtcaccttcatggaagcaatgaggatggtatgttacaacgcttggttctctgcatgttgttcaagcagtttgatttctgtaacacctgcgtcgtttcctttttaatgctgctatctgctaatcatttgttttttggaatgtgaaaaatttcagatgagccttggcctgaggctatggtcgtatgtccgagaggaggcttctcatggaagggtaccatcggctgttcttatgctatttatatttcattacttaatggaatttccttttatctaaaattataccaaacatctatgaatataaattgtgtgtggtgataaaatggggtctgctatgcttgcagaaagctccaattgatccgtttaccaaagagaaatgtaagccgtctgcttcgcagggcgtaccgcttggtgggatggggtgtgtccgcctgaattgatgttttaacctccaataatctcatgtttatgcttgtctatttgcactatggatgctgtaattttgataccaatacactggttttgcaggagtggtagcatttcaagaggtttcaggggagagttcaagaattggcatatcattcctggtttatgtgagacttccccggtcatggagaaccagttttcagtaatgctttcttcttctttctgctgttgctggttaatcaacttggtttatggtgatgcataattgaatttttggaccattagctagcttatctgaaggattttcttctgactgctgaaaatgctcctagcccctcactagtcactagtattatttttggggaaagtcttatgacatctacccttcactggtgtctcacatactcatattatggcaattcactaaatatgcgtcaaaaagaatcttttaagtgctatctttgttgttgcggctgtgctcaagtgtgaaatcaactgttgagtggagtgtttttggggacttttgttgagataaaaaggcacgactgtttccactgtttaatgtttgtggatggacgagttccatctgctgcttgtgacactttttgatgagtgttgtaatcagttagcaagttcttgtcaattcgccagctattacacacttatttttcctatcgatgtatataaacttccatggatgtgggccacccaatcaagcccatcaggggctccatacaagatttatgacagcaactgtttataaaatcttgaatcttttgacttagtactcccgagtcactatgcttgtttattttttttctcacaactaaggtgagagtcttgaactgacacatagtaccctgctgttctagatatttgtatctcgcgatggggggaacaaaaagtactcatcggtattgtctcccggacaccatgaaggtttaaagtaagtttcttcatttatattgcaaataacagtctttctttagtttatccaaatttactaagtctgagcttctgagctcgtcattctgcaatcctgtatcttgcacaagggtaagcttcaacaagtagatttgtaattttgcattgcttttctgaagttaaaacttgcagaagttctttattgttgattgaatggtattcacagccaattgtatagtgcatacattgttaccttgtatttgttcttctgatgtgccttgtttcccatatagtatgtggccttttgaaatgcagatccactttgcatactttatataagtgacttgcgcttcaattttaattttaatttgtgattcaaaagccaacggcgctgtgcgtagaaatttatttcaaatatcgacttgcatattatatagcagagagagtgtgagatatataccaaattctttcttgtacatttgtgactcaagagtcaaacatcgctgtgcataatgtgaacagaattctagtttattgtacctatatatatgttgcaatcacgcttcagttatgactcaacaaatttgatatagagtgcacttgtttgatgccttacctgatttcaggaaatgtaatgactctggaatttcttcatgggactggaacttgagcggtcaacattctacctatcatgctttatttcctagggcatggactgtttatgatggtatgccatcatggagctgtggaacattgcttgcatcttgtgatggcacaaacacttctcttttctaccaagagatggatatgctttatgccaagccagcttatatgttgattacataattaattttcaatactattatatggagttatgaacttgatggatatctttttttagtagcagtagacatgttttgaacttaagaatcttatgaatttttccgtgtattcaggtgaaccggatccagaccttaaaatctcatgtcgtcagatatcaccattcattcctcatgattacaaagatagcagcctcccaacttctgtctttgtgtacactgtaagtgactcataaagttagttttatgctaggctggcaggttcttcagctggtatatttccctcatctttttttatttcatatttcctgataagtatattcctttagataatatcatggaatatacatgtggatcggtgttgataacagttgggattaggtttgtggaactaggggattaaccatgtctcgctctaattcttgcttgaatctgatactggttcaataacatttatattaagaaatatgttctggcaacttcagccaagatattccacatgtaacagttctgacatggatcataaggtagagagagccctgcctttttatgtcgacaggagaattttaacatggtcactgttaaaataatattgttggtgcgaacatatatgtcaaaacatttcagaatacagttatatagaaaaatgtttaattacagtgattgttcttagatcatgggacatgctgtttacttgaggagttactgattaatgaatattctactgaattgaatgttcccattaagttttcatatgtatttacatgaagagatgctcttaatcttctcaacctgatgaaattacatgaccatccttccttttgttttctgtgtttattatagctagtgaacactgggaaagaccgtgcgaaagtgagcctgttaatgacatgggcggtaaggacatctaaatcttctgtaacaatatattttctgcatctatcagtatatcaccatttatgtttacttatgcattactgtgctttagactttgtggctcacataagtttttatagtttatatatactagtgcaacaatagtaccatgatggcaaaacacccatgaaaaatgttggacattttcattagtataactctcatccttacttgatatttacttgaaaaattattgttgctgcttcaagtgcctaattaatgattttctctcattaaacgcagaattctatcggaggtttttctcatcactctggaggccattttaatgagcccttcatgtaagtaatttgtagatattttttatacctgttcatacttttagatcagtggtgctcatggcttgatttcataacatggtcagtgcggaggatggagtttcaggagttcttctgcatcacaagcaagtgtcaaaccaaaccttctcccttgttccacatattcttgcatcatgtgttgcctgcacgagctaacagactagcatttgttgcagaacagcaaaggataatcctccggttacttttgctattgctgcctgtgaaactcagaatgtgaatgtgacagtcttgcctgtatttggcctctctggagaaggccatgattcagccaagcaaatgtgggatagaatgaaacaggtgatcgatggcagcctttctttcaacagtggttcagtgcagcaattctacgttcctgacataactaaatattcctctcattcaccttttactttatcttcagaacggccactttgaccgtgaaaatttcgaagctggtaccagtatgccttcatcttcaggggagacactttgtgcagctgtctcagcatcaacctgggtagagccacatggtagatgtactgttgtatttggtttggcttggtcctctcctaaaataaagtttcagaagggctgcacatacaacaggtcagcacactcttggtttgggtacctttgctgattttgtttatatctacagtgagttattctttgtttctgaactccggatcacctatatgacctatctgcaaattcatcttagaccggcatagccccatgtgctatgacatgtaattgatcccaaataaatgtaccatacgttctgttaatccttgggcaaaaaaagtcatataatagcacaagttctcatagatctgttcagaaaagatctcttgaagtgaagagctgggaatgcatcatgaacacctattgttttgagttggtagagaaataccagtatatcttacaacatggttaaatatctcacattgaccaattgtggtggcttgttttatttagttatctatcacattgcttatacataattagccttttccccatggtagcttcttttttatatcacaaaaatatattcactgctatctgttaagagtacatagcaagtgaattccacatgtcaaacttaaaattagtgtgcattacaataccttctaatcgattgatattctatcttatattgcaggaggtacactgaattttatggaacttctgaaagatcagctgttaatttggtacacgatgccttgacaagtatgtctttttgtccagctcttcataaatcttctctagtcacttagacatcttaatcttgtacacattcacacacaatgcagtaattacttgttgctgtcgtaattcacacattctcaacaaagttaaatgatgctgtgatagggacagatgtgcaatgttggtccttggtttctgaccttacgctgttggatgttccttctatgtttttttgcagaatataggatttgggaagaggagattgagaagtggcaaaaccccatactcaagaatgaaaaacttccagaatggtacaaccttagttctatatttctttctgaactgatgtgttctacttcttcagtaaagaactttggcagtaaacatctaaatctcccaaagaaaaacaaaatcttaactagaatatttggggtttcatggtgcttgcaggtacaagttcacactttttaatgagctttactttctggtagctgggggtactgtttggacaggtatgcttcattcaactttgtaatggtgtggtttttgtgcttgttcagttgtacatcataaattacaatctggatgtcgttaggataatttttaaaattgcaccttttactcttgaaacttctttgcggtacctgagtttagcatcacctttgtagatggccaaccaccagttatcgatgaaaaaccaagtcctggttctaatcaacagaaatcttcaaaaaggggcactagagacactaaacaggaatcagttaaagataaccatgtcaaactgacagcagagcaagtcactaatggtggtgacctggctaatggcgaagagcaaagtgtgtcaaagtatgcagcagtacatggaccacaaatggctaaggcaaccaacggacttgggtcacaagagccaattccatacttgctttccaagaatggccctgaaaatgttggcaaatttttgtacctggaaggagtggaatacatcatgtggtgcacctatgatgtgcatttctatgcttcttttgctctgcttgatctgtttcccaaaatagagttgagtatccaacgtgattttgccaatgctgttctctatgaagacagacgaagaatgaaatttttggctgatggtacttctggaattcgcaaggtcaaaggtgccgttccgcatgacctaggaacacatgatccatggcatgaaatgaatgcgtacaacatacatgatacaagcaaatggaaagatctaaatccaaagtttgtgctccaggtatacagagacttcgctgctacaggtgatatgtcatttggtagagatgtttggcctgccgtctgtgcagtgatggactatatgaatcaatttgaccgtgacggtgatggtctcattgagaatgatgggtttcctgatcaaacctatgatgcttggactgtacacggaattagtgcttactgtggcggtctctggcttgctgcacttcaggctgcagctacaatggctcatcggcttggtgatcggccatttgctgaaaaatacaagctcaaattcatacaagcgaaagcagtatatgaggctaagttatggaatgggtcttacttcaattatgacagtggcacaagcagtaatagccgatctattcaggcggatcagctggcagggcagtggtatgctgcttcttcaggcttgcccccgcttttcgatgagaataaaataagaagtgctctgcagaaaatatttgaattcaatgtaatgaaggttaaaggaggacgattgggagctgtaaatggtatgactcctaatgggaaagtggatgagacatgcatgcaatctcgggaaatctggaccggtgttacatacggtgttgctgcaaacatgctgctccatggaatggagcatcaaggattcaccactgccgaaggaatttttattgctggttggtcagaagaaggatatgggtaagcactaccttgttcttcgaataatctcatatttcgcaattcacaacaatgcaacttgcttcgcatcgattttgctctggcgcacctctcttaaaccactcccttatgaataccgttctacttctcactgacaatttcattaaaaatactaattagatattgttgatgctctcttgtttcaaccaccgtttgctttgtgatatagataacatggggtttcttgctgtgttgcaggtattggttccaaacaccggaaggctggaccatagacgggcactacaggtcgctcatctacatgcggcctctcgccatttgggcaatgcaatgggcacgttctccacccaaggcaatccttgatgcccccaaggtaaacctgatggacaggatacacctatccccacaaatgatccgggcaatgaacgagattaatgttagaaagatagcacccgacaatagatgtttccctagctctgcatttcgttgtgaatgctgaccacaaaaaaaaaagagaagcaaaatgcaacaactgagtagtaacatacatatatatactttccttttcggcttttccttggccccttacaagtttcagtggggttcatggggttttccttgaaatcagagggcatataaatctacggaaccactaagctcagtagctcacactctcacagctcgaaaagagctcttgttgtataattgtacagtaaactacaaaatcatatcgtcagcatcatctttgctctgcgtcaaaaagttttgtttacagactctttaactgatgtctgagcttccctttgcgggtatcaattccgagaaacacagtgtatatagattttacaatggacattccgtaatataatcgttaagcgagggatttattct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0473400, RefSeq:Os10g0473400