Os01g0222700

From RiceWiki
Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0222700| Description = Protein of unknown function DUF1544 domain containing protein| Version = NM_001048974.1 GI:115435361 GeneID:4326701| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0222700

Description

Protein of unknown function DUF1544 domain containing protein

Version

NM_001048974.1 GI:115435361 GeneID:4326701

Length

4694 bp

Definition

Oryza sativa Japonica Group Os01g0222700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6704839..6709532

Sequence Coding Region

6705067..6705470,6706880..6708553

Expression

GEO Profiles:Os01g0222700

Genome Context

<gbrowseImage1> name=NC_008394:6704839..6709532 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6704839..6709532 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagagggatgtctgctgggagtactgtgacaagatggaagggaacaaggtcaggtgcaggttctgctacaaggtcctaaatggtggtataagcagactcaagttccatctgtctcaaatctcaagcaaaggcgtcaatccttgcaccaaggtgaagccggatgtcatagaaaaggtgaaggctgtcatagcagcgaaagaagagcacagagagacacaggttctcaagaggcaacgtgacactgaattgtcggtgcgtccaagaagaatacgggaccttccctctcagcctacatctccagagcgagctacttctcctgctattacttcaacctctgaccagacacagttccttgcgttggaagtatctactccagtactgaagctatcatctgtgacaaacaaggctcgctcagcaccacaatcggaagccgaacgatgcatagctgaattcttttttgagaataagttggactacaatattgcagactctgtttcataccggcacatgatggaggcacttggtggacagggattccgagggccgtcagccgaggttttgaagacaaagtggttgcacaagctcaagtcagaggttttgcagaaaaccaaagagattgaaaaggattgggcgacaacaggctgcactatattagctgattcatggactgataacaaatcaaaagctctcatcaacttttctgtatcatccccattagggacattcttcctgaaaacagtggatgcttctccacacatcaaaagtcaccagttgtacgaactctttgatgatgtgattcgggaagttggtccagacaatgtggtgcaaataatcactgatcggaatataaactacggcagtgtagacaagctgatcatgcagaattataacaccattttttggtctccatgtgcgtcttcttgtgtaaactcaatgttggatgacttctccaagattgattgggtgaaccgatgcatctgtcaagcccaaaccataacacgatttgtctacaacaacaagtgggttcttgatcttatgagaaagtgcatagctgggcaggagcttgtttgttcaggaattacaaagtgtgtgtcggattttctcacactgcaatcattgttgaggcacagaccaaagctaaagcaaatgtttcacagctctgactatgcatcttcttcgtatgcaaacaggtctttaagcagttcatgtgttgagatccttgatgacgatgagttttggagagcagtcgaagagatagctgctgtttctgaacctctattgagggtcatgagggatgtcttaggaggcaaggctgctattggttatatatatgagtctatgacaaaagtgatggactctattagaacatactacataatggatgaaggaaaatgcaagtcatttctggatatcgtcgagcaaaagtggcaggtggaattgcattcacctcttcattcagcagctgcttttctgaacccaagcattcagtataatccagaagtcaaatttttcactagtattaaggaggagttctaccatgttctggataaagtgcttacagtccctgaccaaaggcaaggtatcacagtggagctgcatgcttttcgaaaggcacaagggatgtttggctctaacattgcaaaagaggcccgtaacaacacctccccagggatgtggtgggaacaatatggtgattcagctccatcacttcaacatgctgctgtcagaatagtcagccaggtctgcagcaccctgaccttccaaagagattggagcataatcgttcggaatcattcagagaagcgcaacaagttggacaaggaggctttggccgaccaagcctatgtgcattacaatttcatgctccattccgactccaagatgaagaagggtgatggggatcccatcgcgctggatgctatcgacatgacctcgccatgggttgaggactctgacagtccaaacctcgcccagtggctcgacaggttcccgtctgccttggatggtgacttgaacaccaggcagtttggtggttcgatctttggcaccaatgatactctgttcggcttgtga</cdnaseq>

Protein Sequence

<aaseq>MRERDVCWEYCDKMEGNKVRCRFCYKVLNGGISRLKFHLSQISS KGVNPCTKVKPDVIEKVKAVIAAKEEHRETQVLKRQRDTELSVRPRRIRDLPSQPTSP ERATSPAITSTSDQTQFLALEVSTPVLKLSSVTNKARSAPQSEAERCIAEFFFENKLD YNIADSVSYRHMMEALGGQGFRGPSAEVLKTKWLHKLKSEVLQKTKEIEKDWATTGCT ILADSWTDNKSKALINFSVSSPLGTFFLKTVDASPHIKSHQLYELFDDVIREVGPDNV VQIITDRNINYGSVDKLIMQNYNTIFWSPCASSCVNSMLDDFSKIDWVNRCICQAQTI TRFVYNNKWVLDLMRKCIAGQELVCSGITKCVSDFLTLQSLLRHRPKLKQMFHSSDYA SSSYANRSLSSSCVEILDDDEFWRAVEEIAAVSEPLLRVMRDVLGGKAAIGYIYESMT KVMDSIRTYYIMDEGKCKSFLDIVEQKWQVELHSPLHSAAAFLNPSIQYNPEVKFFTS IKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQGMFGSNIAKEARNNTSPGMWWEQYG DSAPSLQHAAVRIVSQVCSTLTFQRDWSIIVRNHSEKRNKLDKEALADQAYVHYNFML HSDSKMKKGDGDPIALDAIDMTSPWVEDSDSPNLAQWLDRFPSALDGDLNTRQFGGSI FGTNDTLFGL</aaseq>

Gene Sequence

<dnaseqindica>4063..4466#980..2653#agcacgctcctctcctctcttccccaacgactccgctcgcgacgacgcggcggcggcttgcccccaaacctacctccccgagttcccgaccaggagacgagaaaatcggggggagaagaagaagaagaagagcagaggagagaaaccactccagcgagatcctactcctcccccgccctgcgccgctcgctcccacgcttgctcaggtcagccagcgggcgcctcgccttctccctctcccggcggcctacgggcgaacaactcggggagcaactcccggatctcgcgtcatttcgcgagcgggttattatttctcgcgaattaaatcgatgtttttgttttaaatcgcgcgcccacttctgtggcctactactgtgttgggttcagatgtggatttgaaactaaaattgggtggaaatgtcagctttgtgcccatttctgctgcttcactggggtactgatgattccgccatatagccgcaccacagtttcatagtactccaggtttcaggatcgatggcagaatcggggagtcgtttcttgagttcactcgactcaatgagcagtagctcatctcactactgttgaatgaaaggggaacaacttagaattaccgattaagttcaagaagaagattagaatcgcttgtgtttatgcacaatgtgatactatgctgcctctagcagctgaaaacttgaaatgccttattttagctcctgattttctacttgcaatgtatccagttcctagatgcttaggtctcaccatatgtaagcgtaagtgtaagcatcagctttctgtaaattcatgggtctgatgattcttgtgcagatatttaataacaagaagccggattctgcttcgccataaagtatgttactctctccattcaccatttgtaactaaggccattcatgcagtgagtgcctggaagctgaattcctggctggcttgtgcttatttctgttcaatgtttcagtgagggagagggatgtctgctgggagtactgtgacaagatggaagggaacaaggtcaggtgcaggttctgctacaaggtcctaaatggtggtataagcagactcaagttccatctgtctcaaatctcaagcaaaggcgtcaatccttgcaccaaggtgaagccggatgtcatagaaaaggtgaaggctgtcatagcagcgaaagaagagcacagagagacacaggttctcaagaggcaacgtgacactgaattgtcggtgcgtccaagaagaatacgggaccttccctctcagcctacatctccagagcgagctacttctcctgctattacttcaacctctgaccagacacagttccttgcgttggaagtatctactccagtactgaagctatcatctgtgacaaacaaggctcgctcagcaccacaatcggaagccgaacgatgcatagctgaattcttttttgagaataagttggactacaatattgcagactctgtttcataccggcacatgatggaggcacttggtggacagggattccgagggccgtcagccgaggttttgaagacaaagtggttgcacaagctcaagtcagaggttttgcagaaaaccaaagagattgaaaaggattgggcgacaacaggctgcactatattagctgattcatggactgataacaaatcaaaagctctcatcaacttttctgtatcatccccattagggacattcttcctgaaaacagtggatgcttctccacacatcaaaagtcaccagttgtacgaactctttgatgatgtgattcgggaagttggtccagacaatgtggtgcaaataatcactgatcggaatataaactacggcagtgtagacaagctgatcatgcagaattataacaccattttttggtctccatgtgcgtcttcttgtgtaaactcaatgttggatgacttctccaagattgattgggtgaaccgatgcatctgtcaagcccaaaccataacacgatttgtctacaacaacaagtgggttcttgatcttatgagaaagtgcatagctgggcaggagcttgtttgttcaggaattacaaagtgtgtgtcggattttctcacactgcaatcattgttgaggcacagaccaaagctaaagcaaatgtttcacagctctgactatgcatcttcttcgtatgcaaacaggtctttaagcagttcatgtgttgagatccttgatgacgatgagttttggagagcagtcgaagagatagctgctgtttctgaacctctattgagggtcatgagggatgtcttaggaggcaaggctgctattggttatatatatgagtctatgacaaaagtgatggactctattagaacatactacataatggatgaaggaaaatgcaagtcatttctggatatcgtcgagcaaaagtggcaggtggaattgcattcacctcttcattcagcagctgcttttctgaacccaagcattcagtataatccagaagtcaaatttttcactagtattaaggaggagttctaccatgttctggataaagtgcttacagtccctgaccaaaggcaaggtatcacagtggagctgcatgcttttcgaaaggcacaagggatgtttggctctaacattgcaaaagaggcccgtaacaacacctccccaggtattatttatcgtagtggcattgttctaatattcttaaaatgcagtagtataggtcgattaactagaggataaacgtaacaactgaaagatagaaattagttactccagtaatcacttaatctcaagctagcggcttgccaacgagatgattgaaccacgtgtcctagttaaacttcaagataaatgaagaattttacttaggataaaaaaacaaaaacaaaaacaaaactaagctacgcaacgctaatgcacgagagcgttctcgctactcagagcacatgctctcatctactcctacatggctacacctgtatcaagagagaagacgaagaaaacaaaagctggcctgttgttccatattattcattgatacacgtagagagagaactgcttagcatcatctactcgctcgcatgctcttctcttctacacaggcatgctactcgatcgcacatgctgtgctgtagtctggtggcgcggtacaaataaatgtgggagtaaccgtgagaagaaaaaaagaaaacacactagattgagaaggatcaggtgcttgactgcaacatccatagggccatggaacgaattgggccactagccgctaaggcctctagctgtaatgggaaaaataggcggcttggaccgattgtattagtttacatgtaaaacacaatattttatatgcacctgatcaattaatcccaaatcagtttattgaacgttataattgctcttacgtgctaaaagtgaaaataattaagatttttggttattttttccgagtactatctgctacaagttacactagaaagtgaaaataaaaatattattaagatgctctaatactatatggtttttactggcgtattaacgtgctaattagcaagcgcaccaatttctagtagattgctatgtttaaatggttctcatgcttgatgataaaaacctgcaagctggaattaaccgctatatcgcttgagaacaaataagcggccccaaaatgcaggtccattcagaaatatatatttgactattcaaaatttcacactatgaacaaaacaaggaaaattttttgtttccaaaacattttgaggccgctgggcactagctacatataaatattgcaccattagtgtttctttgctgcaagcatgcggtccacggtccaatcacctgatttgggagaaaaacatactaaatgtaaaccacacaagccaatggtatcacacatatattagttagaaatttttaaaaaaggatccaaactttatggtatgaaaatatttatagattttactatatataaatgtggcactaaatttgtaaatgctaataatataacatcgttaatgactgcacgtgcttgctgatatctgtattctaactagtaatgacctttttgatgatcagggatgtggtgggaacaatatggtgattcagctccatcacttcaacatgctgctgtcagaatagtcagccaggtctgcagcaccctgaccttccaaagagattggagcataatcgttcggaatcattcagagaagcgcaacaagttggacaaggaggctttggccgaccaagcctatgtgcattacaatttcatgctccattccgactccaagatgaagaagggtgatggggatcccatcgcgctggatgctatcgacatgacctcgccatgggttgaggactctgacagtccaaacctcgcccagtggctcgacaggttcccgtctgccttggatggtgacttgaacaccaggcagtttggtggttcgatctttggcaccaatgatactctgttcggcttgtgacagctttcagttgatcagctcctcgtccggcaatgtgttgcttctgatgtacaagttatctctgtatgtatcattccatctccatatatctttgctagactagattctatatttgtttataccaaggtgaaaacctgttacttgttttggatcggacatgagaagctgataacctggagtatatggattatcgagattggagaacatgaaactgaacttttgatggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0222700, RefSeq:Os01g0222700