Os01g0223000

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0223000| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001048976.1 GI:115435365 GeneID:4326703| Length = 1596 bp| D...")
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Gene Name

Os01g0223000

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001048976.1 GI:115435365 GeneID:4326703

Length

1596 bp

Definition

Oryza sativa Japonica Group Os01g0223000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6717329..6718924

Sequence Coding Region

6717367..6717623,6717727..6718006,6718121..6718266,6718349..6718573,6718678..6718924

Expression

GEO Profiles:Os01g0223000

Genome Context

<gbrowseImage1> name=NC_008394:6717329..6718924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6717329..6718924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctctcttctcctctctgtcgtcgctgcatgccgccggcgccggcgccggcgcctcctccctctccgttcggcgctacgacgccatcttcagcttcggcgactccttcgccgacacgggcaacaaccccgtcgtcttcggctggtactccgtcttcgaccccgtcacccgccctccgtacggctccaccttcttcggccaccccaccggccgcaactgcgacggccgcctcgtcgtcgacttcgtcgccgaacgcctgggggtgccgctcttgccgccattcttggcttacaacgggagcttccgccgcggcgcaaacttcgccgttggcgccgccaccgccctcgactccagcatcttccacgccggcgatcctcctccgggcgccagcccgttcccggtcaacaccagcctcggcgttcagctgggctggttcgagtcgctcaagccttcgctctgcagcacaacacaagaatgcaaggatttcttcgggagatccctcttcttcgtcggcgaattcggattcaacgattacgagttcttcttcaggaagaagagcatggaagagatcagatcgttcgtcccatatatcatcgaaaccatctccatagccatcgagaggctgatcaagcacggggcgaagagtttggtcgttccaggcatgacaccgtcaggttgcacgccgctaattctcgccatgtttgctgatcaagctggcccagatgactacgacccggtcaccggctgcctgaaggtgcagaacgagctagctattcttcacaactcgctgctgcaacaatcccttcggaatctccaggccaggcacccggatgccagcatcatctacgccgatttcttcagccccatcatggagatggtgcagtcacctggcaagtttgggtttgaagatgatgttcttaccatttgttgtggagggcctgggactgctctctgtggcaatcagggcgcgatcacttgcgaggatccttctgctcgtctcttctgggacatggttcacatgacggaggtggcttaccgctacatcgcggaggattggctgcgcatcagagtcacctgggaacaaaataatttgagtgttttcagagtccataagaagatatatacagagagcaccaaattttcagtgttaatttga</cdnaseq>

Protein Sequence

<aaseq>SLFSSLSSLHAAGAGAGASSLSVRRYDAIFSFGDSFADTGNNPV VFGWYSVFDPVTRPPYGSTFFGHPTGRNCDGRLVVDFVAERLGVPLLPPFLAYNGSFR RGANFAVGAATALDSSIFHAGDPPPGASPFPVNTSLGVQLGWFESLKPSLCSTTQECK DFFGRSLFFVGEFGFNDYEFFFRKKSMEEIRSFVPYIIETISIAIERLIKHGAKSLVV PGMTPSGCTPLILAMFADQAGPDDYDPVTGCLKVQNELAILHNSLLQQSLRNLQARHP DASIIYADFFSPIMEMVQSPGKFGFEDDVLTICCGGPGTALCGNQGAITCEDPSARLF WDMVHMTEVAYRYIAEDWLRIRVTWEQNNLSVFRVHKKIYTESTKFSVLI</aaseq>

Gene Sequence

<dnaseqindica>1302..1558#919..1198#659..804#352..576#1..247#tctctcttctcctctctgtcgtcgctgcatgccgccggcgccggcgccggcgcctcctccctctccgttcggcgctacgacgccatcttcagcttcggcgactccttcgccgacacgggcaacaaccccgtcgtcttcggctggtactccgtcttcgaccccgtcacccgccctccgtacggctccaccttcttcggccaccccaccggccgcaactgcgacggccgcctcgtcgtcgacttcgtcggtccgatcatcttcccccgccgtcgattcatcgatgtggcaatcgtcaattttgttgtgatcatggtggattttgattttctctgtttgcttgcttgcttgcagccgaacgcctgggggtgccgctcttgccgccattcttggcttacaacgggagcttccgccgcggcgcaaacttcgccgttggcgccgccaccgccctcgactccagcatcttccacgccggcgatcctcctccgggcgccagcccgttcccggtcaacaccagcctcggcgttcagctgggctggttcgagtcgctcaagccttcgctctgcagcacaacacaaggcaaaaagagtagcagctatgtatcacagattcgcgtagaattggcgaaactaaaaaggcagttcatacctttgctctgcagaatgcaaggatttcttcgggagatccctcttcttcgtcggcgaattcggattcaacgattacgagttcttcttcaggaagaagagcatggaagagatcagatcgttcgtcccatatatcatcgaaaccatctccatagccatcgaggtaataattatctagtacatgataatcaatcatgtgacattaatctggaactgaaatgaatactacaagtaatattagtaccgatcacccgatgaactcggctaatgatggcagaggctgatcaagcacggggcgaagagtttggtcgttccaggcatgacaccgtcaggttgcacgccgctaattctcgccatgtttgctgatcaagctggcccagatgactacgacccggtcaccggctgcctgaaggtgcagaacgagctagctattcttcacaactcgctgctgcaacaatcccttcggaatctccaggccaggcacccggatgccagcatcatctacgccgatttcttcagccccatcatggagatggtgcagtcacctggcaagtttggtcagtagcacagtgcatcagattcttcagatttctgtacatgttctgtaggatctttgcagcaaagggaagcagtgagggttaatggttgcaattgctgcagggtttgaagatgatgttcttaccatttgttgtggagggcctgggactgctctctgtggcaatcagggcgcgatcacttgcgaggatccttctgctcgtctcttctgggacatggttcacatgacggaggtggcttaccgctacatcgcggaggattggctgcgcatcagagtcacctgggaacaaaataatttgagtgttttcagagtccataagaagatatatacagagagcaccaaattttcagtgttaatttgaggtacctctcagtacttcataataatcttgatgtctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0223000, RefSeq:Os01g0223000