Os01g0223200

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0223200| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001048977.1 GI:115435367 GeneID:4326704| Length = 3593 bp| D...")
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Gene Name

Os01g0223200

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001048977.1 GI:115435367 GeneID:4326704

Length

3593 bp

Definition

Oryza sativa Japonica Group Os01g0223200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6723926..6727518

Sequence Coding Region

6724180..6724394,6726280..6726556,6726645..6726790,6726901..6727125,6727230..6727506

Expression

GEO Profiles:Os01g0223200

Genome Context

<gbrowseImage1> name=NC_008394:6723926..6727518 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6723926..6727518 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcatgttgtggctgcccgccgccgtctcgctcctcctctcgtcgtcgctgcatgtcgccggtgacgccggcggcggcgtcgcctccctctccgtccggcgctacgacgccatcttcagcttcggcgactccttggccgacaccggcaacaaccccgtcgtcttcgactggtactccatcttcgaccccgtcacccgccctccctacggctccaccttcttcggccgccccaccggccgcaactgcgacggccgcctcgtcctcgacttcgtcgccgaacgcctgggcctgccgttggtgccgccgttcttggcttacaacgggagcttccggcacggcgccaacttcgccgtcggcgccgccaccgcactcgactccagcttcttccacggcgccggcgatcccccgggcgccagcccgttccctctcaacaccagcctaagcgtgcagctgagctggttcgattcactcaagccctcactctgcagcacaactcaagaatgcaaggatttcttcggcagatcgctcttcttcgtcggcgaattcggcatcaacgactaccactcctccttcgggaggaggagcatgcaagaaatcagatcgttcgtcccggacatcatccgtaccatctccatggccgtcgagaagctgattggcgacggggcgaccacggtggtggttccgggcatgatcccgtcgggatgctcgccgccggtgctcgtcaccttcgccgacgccggcgcggcggagtacgacgcgagcaccggctgcctgagggagcccaacgaggtagcgacgctgcacaactcgctgcttctggacgccgtcgaggagctccgggagaagcacccggatgtcgccatcatgcacaccgatttgttcagacacgtctcggagatggtccagaatcctgacaagtttgggtttcaaaaggatgttctcagcgtttgctgtggaggtcccggaaaataccactacaacaccaggataatctgcggcgatgaaggtgcgaccacctgtgtggatccatccaagagcttgtactgggacggcgtccacttaaccgaggcagcttaccactacatcgccgatgattggcttcatgccataaccttatctgcaagagctacctcctaa</cdnaseq>

Protein Sequence

<aaseq>MIMLWLPAAVSLLLSSSLHVAGDAGGGVASLSVRRYDAIFSFGD SLADTGNNPVVFDWYSIFDPVTRPPYGSTFFGRPTGRNCDGRLVLDFVAERLGLPLVP PFLAYNGSFRHGANFAVGAATALDSSFFHGAGDPPGASPFPLNTSLSVQLSWFDSLKP SLCSTTQECKDFFGRSLFFVGEFGINDYHSSFGRRSMQEIRSFVPDIIRTISMAVEKL IGDGATTVVVPGMIPSGCSPPVLVTFADAGAAEYDASTGCLREPNEVATLHNSLLLDA VEELREKHPDVAIMHTDLFRHVSEMVQNPDKFGFQKDVLSVCCGGPGKYHYNTRIICG DEGATTCVDPSKSLYWDGVHLTEAAYHYIADDWLHAITLSARATS</aaseq>

Gene Sequence

<dnaseqindica>3125..3339#963..1239#729..874#394..618#13..289#agaacacgaaagatgatcatgttgtggctgcccgccgccgtctcgctcctcctctcgtcgtcgctgcatgtcgccggtgacgccggcggcggcgtcgcctccctctccgtccggcgctacgacgccatcttcagcttcggcgactccttggccgacaccggcaacaaccccgtcgtcttcgactggtactccatcttcgaccccgtcacccgccctccctacggctccaccttcttcggccgccccaccggccgcaactgcgacggccgcctcgtcctcgacttcgtcggtccggtcatcttctcccgcgccgtcgattcatcgatgcgcggccaagcgtgaattaatttgctgtgatcatggtggattttgattttctctgtttgcttgcagccgaacgcctgggcctgccgttggtgccgccgttcttggcttacaacgggagcttccggcacggcgccaacttcgccgtcggcgccgccaccgcactcgactccagcttcttccacggcgccggcgatcccccgggcgccagcccgttccctctcaacaccagcctaagcgtgcagctgagctggttcgattcactcaagccctcactctgcagcacaactcaaggtggttaattaatcaatcacgatcagttgttgatccatctccaagataattaagctgaaatttaccaatcaagaaccactttgtgctcacgtaattgattagtgacgcagaatgcaaggatttcttcggcagatcgctcttcttcgtcggcgaattcggcatcaacgactaccactcctccttcgggaggaggagcatgcaagaaatcagatcgttcgtcccggacatcatccgtaccatctccatggccgtcgaggcaagaacaacacaccctttgaccgatcctaccgagaaatcaaacagttcatcaattatgcgtggattaatgaattgtgtggaagcagaagctgattggcgacggggcgaccacggtggtggttccgggcatgatcccgtcgggatgctcgccgccggtgctcgtcaccttcgccgacgccggcgcggcggagtacgacgcgagcaccggctgcctgagggagcccaacgaggtagcgacgctgcacaactcgctgcttctggacgccgtcgaggagctccgggagaagcacccggatgtcgccatcatgcacaccgatttgttcagacacgtctcggagatggtccagaatcctgacaagtttggtaagtacaattatttactaccccaatcattagaatgcgatgcacgccaatcgtttaataaatctgtttggacgtgtacatcggcttgatggatattttatataaagatcggacttaatccaatatataaaacattaataaatccacatcataaatgatactccctctgatttcgatcgaaccaaagtcatacataagatggaggaagtagtatgatatgtttgtatacttacaagtttattattatgtaaaatggaagtggtcaaactaaaagtctaacatattcaatattaacaaaagtgttcccttcacttttaaatacatgatgttgttggcatacgtaaatgtaatttattttgtggtgggtagcttgttttattgttaaatgtactttaagtatcacttattttttatatttgcactcaatgtatttttaaataagataaatagtcaaatatattctaaaaatcaacaacgatatcctatcttactataaagttatcctccactaactccttaagcttaacatgtaaggatgtcacatcatcatccactaacaagatgcatgccacatcatcatccactaacaatcatcacatttaaacatcatacaaacatgctatatctttatagtttttataatttaagagcttttcaaatacaaacatgttaaattatcatccaacataattcacataatatttcaatgtatatctttattatgttttatgatatcatatatacttatatagttcatcatcacttagttagtgcttaaatgattaatctatgatccatattatctttcttctttttttccctcaaattaagtcatatcatatcaattgtttttaggctttagatgattaatctacggttcaaactttctccctacttttcttcttccataaagtcacacctccttactttttacgtttgaatcaccattctacatactatttaaatttaaattattataaaccacattaatttacttaatctgatgttatctagatatcttacacgttatttttttttattgttatcatactaaattctcgcagcaatgcgcggggtttcacctagtatatttttaaatgaaggtagtattattataaaagaatgggatgctcgctaaccattaaccactcatcagtaccatgcgatgagcgcccatcatttaataaatttgcataataaatactcgtgacgtttcaactgagaatatatttaacaattttaactaatagtggttgtaattgatactccttttcttttattttcttagttatatagctgtgtattgtaacatgatcataattcatagtgttttcaagggtacttttaccggtttttgaggggagttttcttttttttagaaaaagagagggagtggttattttagaggaggaaggagaatgactgcgcttttgaaataattaagaaagatattggttaattgaaaaattgaacatcacataaaacaaaatggagggagtataattttctgcacttacaataatatgatatctttgtctactcgtaagtttatttacaaaatataagcggtcaacaaaaaaaatggtcttttaataaaccgtatcttataggacgtcaaaagaatttaagtcgaatattattttatccataaaaaatatgatacacatatacatgacattaggaatggaaatgggatctgctgtcatatactacatgtgcaattgaaccccaatatatatatagccacagcaaagtagaattcacatattagtgacctgtgcaattaagtctgacgatctacttccatggcattgatgggtcatggcctcatgggtgcaaccatagaattgaagtaatcggagtttgtatggtggttaatttgtagggtttcaaaaggatgttctcagcgtttgctgtggaggtcccggaaaataccactacaacaccaggataatctgcggcgatgaaggtgcgaccacctgtgtggatccatccaagagcttgtactgggacggcgtccacttaaccgaggcagcttaccactacatcgccgatgattggcttcatgccataaccttatctgcaagagctacctcctaaaattgatatggcacgaacgtcggatacacacatgtaatgctagttttttttttaaaaagaactacatgtaatgttagttgttggtcgattttccttcgtgaaggaacatcagccttgcagatgatccgagtaaaattgtggagaaaaaactcctctattcaattaaattggcggtctcatcgattcgttcaaaaaaaattatgaaaaaaactgctgaacggatggatatttgaataaaattcgttcttgttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0223200, RefSeq:Os01g0223200