Os01g0223900

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0223900| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001048983.1 GI:115435379 GeneID:432671...")
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Gene Name

Os01g0223900

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001048983.1 GI:115435379 GeneID:4326710

Length

2637 bp

Definition

Oryza sativa Japonica Group Os01g0223900, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6786074..6788710

Sequence Coding Region

6786116..6788557

Expression

GEO Profiles:Os01g0223900

Genome Context

<gbrowseImage1> name=NC_008394:6786074..6788710 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6786074..6788710 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtgctcgtttctctgcaagccatggctgccattaacggagagcgcgaagcccgctcgctcgccggcgccgtcttcccgcgcaagaacggtggtgcagcagctcgccgtcctcttactactgctcggcggcgtcggcggcggcggtggcgcgctgcttgccgcggccgcgtcgacgacggacaccatcctccccggcgagagcatcaccgggaaccagacgctcgtgtccaagaacggtgagttcgagctcgggttcttcaacccgggcgtcgggatccactacttcctcggcgtccgcctcaggaagctcgcggcgtacagccccacgttctggattggcgacagggtctacgtcgtcgacctgcctcgcgccgcgctggagctcttcggcgacagcctctacatcaaggaggacggtgccagcctctggtggtcgtcgccgtcgtcctcctcctcctcctcgggcggcggccgcggcggcggcgcggccgtcgccgtcctcctcgacaccggcgacctcgtggtgagggaccagaggaactcctccctggtgctgtggcggagcttcgactaccccggcgacgcgctgctgccgggcgggaggctggggctcgacgtcgccaccggggagaacgtgtcgctcacgttcgaggggttcacccacaacggcagcctccgggccgacgcgagcaggaggaacgggttcgtgctcaccaccgacggccgcgacacccgcggcgcgttcccggactggatggtgaccacccaagacaacggcggctcgctggtgctcaaccacccggacgccacgaactccaccgagttcctgcagctcaaagtcgggcaggtcagcctggtccggtggtcgggcgccgacgccggctgggtgcctcgctggacgttcccctccggctgcaagtccggcggcggcttcttctgcggcgacttcggcgtctgcacgacggcgaccggcggcgaatgccggtgcgtcgacgggttcgcgccgtcggacacgaaggagtgggggctcggttacttcgtcaccggctgctcgaggtctctcccactcagctgcgacgccaacggccagaccgagcacggcgactccttcgccattcttgacaatctccaaggcctcccttacaacgcgcaggatgagccagcgaccaccgatgaagattgcagggaagcttgcctgaacaaatgctactgcgttgcatactcaactgaaactggatgcaagctctggtattacgacctgtacaatctgagctcagctgataaacctccatacagcaagatctatgtccgattgggttccaagctcaagagcaagaggggattggccacaagatggatggtgctcttggttgttggatcagtagctgtagcttctgcaatgttggcagtgttgcttctatgcaggtacaggagagacctgtttggatccagtaagtttgtagtagaaggatctctggttgtctactcatatgcacagatcaagaaggcaacggagaatttctccgataagctcggcgaaggcggattcggaagcgttttcagaggtacattgcctggatcaaccactgttgttgctgtcaagaatctcaaagggctcggctacgcagagaaacagttcagagcagaagtgcagacggttggaatgatccggcacactaatcttgtccgtctcttgggattttgtgtcaaagggaacagaaagttgctggtctacgagtatatgccaaatggatccttggatgctcatatcttttcacaaaagtccagtcctttgagttggcaagttcgataccaaatcgcgatcggcatcgcaaggggtctagcatatctacacgaagagtgtgagcactgcatcatacactgcgacattaaacccgaaaacatactactcgacgaggaattccgccccaagatcgcggatttcggcatggcaaagcttcttggacgagaattcaacgcggcacttaccaccatccgaggtaccaggggctatctcgcgccagagtggctgtatgggcagccgattaccaagaaggcagacgtgtacagcttcggcatcgtgctgttcgagatgatctcagggataaggagtactgtcacgatgaaattcgggagccatcggtattaccccagctacgcggctgcgcaaatgcatgaaggagatgttctgtgcttgctggacagtaggctggaaggaaatgccaatgtggaggagctcgacatcacctgcagagtcgcctgctggtgcatccaggacagagagggtgacaggccatcgatggggcacgtcgttcgcatgttggaaggtgttgtggacacggagatgcccccaattccagcttcgtttcagaaccttgtggatggtgatgacagtgatatatacgaagaaaactggcgtttgaggacccaagattag</cdnaseq>

Protein Sequence

<aaseq>MACSFLCKPWLPLTESAKPARSPAPSSRARTVVQQLAVLLLLLG GVGGGGGALLAAAASTTDTILPGESITGNQTLVSKNGEFELGFFNPGVGIHYFLGVRL RKLAAYSPTFWIGDRVYVVDLPRAALELFGDSLYIKEDGASLWWSSPSSSSSSSGGGR GGGAAVAVLLDTGDLVVRDQRNSSLVLWRSFDYPGDALLPGGRLGLDVATGENVSLTF EGFTHNGSLRADASRRNGFVLTTDGRDTRGAFPDWMVTTQDNGGSLVLNHPDATNSTE FLQLKVGQVSLVRWSGADAGWVPRWTFPSGCKSGGGFFCGDFGVCTTATGGECRCVDG FAPSDTKEWGLGYFVTGCSRSLPLSCDANGQTEHGDSFAILDNLQGLPYNAQDEPATT DEDCREACLNKCYCVAYSTETGCKLWYYDLYNLSSADKPPYSKIYVRLGSKLKSKRGL ATRWMVLLVVGSVAVASAMLAVLLLCRYRRDLFGSSKFVVEGSLVVYSYAQIKKATEN FSDKLGEGGFGSVFRGTLPGSTTVVAVKNLKGLGYAEKQFRAEVQTVGMIRHTNLVRL LGFCVKGNRKLLVYEYMPNGSLDAHIFSQKSSPLSWQVRYQIAIGIARGLAYLHEECE HCIIHCDIKPENILLDEEFRPKIADFGMAKLLGREFNAALTTIRGTRGYLAPEWLYGQ PITKKADVYSFGIVLFEMISGIRSTVTMKFGSHRYYPSYAAAQMHEGDVLCLLDSRLE GNANVEELDITCRVACWCIQDREGDRPSMGHVVRMLEGVVDTEMPPIPASFQNLVDGD DSDIYEENWRLRTQD</aaseq>

Gene Sequence

<dnaseqindica>43..2484#gagttcagaggtgatgatcgcgacagcacttccgatcaatccatggcgtgctcgtttctctgcaagccatggctgccattaacggagagcgcgaagcccgctcgctcgccggcgccgtcttcccgcgcaagaacggtggtgcagcagctcgccgtcctcttactactgctcggcggcgtcggcggcggcggtggcgcgctgcttgccgcggccgcgtcgacgacggacaccatcctccccggcgagagcatcaccgggaaccagacgctcgtgtccaagaacggtgagttcgagctcgggttcttcaacccgggcgtcgggatccactacttcctcggcgtccgcctcaggaagctcgcggcgtacagccccacgttctggattggcgacagggtctacgtcgtcgacctgcctcgcgccgcgctggagctcttcggcgacagcctctacatcaaggaggacggtgccagcctctggtggtcgtcgccgtcgtcctcctcctcctcctcgggcggcggccgcggcggcggcgcggccgtcgccgtcctcctcgacaccggcgacctcgtggtgagggaccagaggaactcctccctggtgctgtggcggagcttcgactaccccggcgacgcgctgctgccgggcgggaggctggggctcgacgtcgccaccggggagaacgtgtcgctcacgttcgaggggttcacccacaacggcagcctccgggccgacgcgagcaggaggaacgggttcgtgctcaccaccgacggccgcgacacccgcggcgcgttcccggactggatggtgaccacccaagacaacggcggctcgctggtgctcaaccacccggacgccacgaactccaccgagttcctgcagctcaaagtcgggcaggtcagcctggtccggtggtcgggcgccgacgccggctgggtgcctcgctggacgttcccctccggctgcaagtccggcggcggcttcttctgcggcgacttcggcgtctgcacgacggcgaccggcggcgaatgccggtgcgtcgacgggttcgcgccgtcggacacgaaggagtgggggctcggttacttcgtcaccggctgctcgaggtctctcccactcagctgcgacgccaacggccagaccgagcacggcgactccttcgccattcttgacaatctccaaggcctcccttacaacgcgcaggatgagccagcgaccaccgatgaagattgcagggaagcttgcctgaacaaatgctactgcgttgcatactcaactgaaactggatgcaagctctggtattacgacctgtacaatctgagctcagctgataaacctccatacagcaagatctatgtccgattgggttccaagctcaagagcaagaggggattggccacaagatggatggtgctcttggttgttggatcagtagctgtagcttctgcaatgttggcagtgttgcttctatgcaggtacaggagagacctgtttggatccagtaagtttgtagtagaaggatctctggttgtctactcatatgcacagatcaagaaggcaacggagaatttctccgataagctcggcgaaggcggattcggaagcgttttcagaggtacattgcctggatcaaccactgttgttgctgtcaagaatctcaaagggctcggctacgcagagaaacagttcagagcagaagtgcagacggttggaatgatccggcacactaatcttgtccgtctcttgggattttgtgtcaaagggaacagaaagttgctggtctacgagtatatgccaaatggatccttggatgctcatatcttttcacaaaagtccagtcctttgagttggcaagttcgataccaaatcgcgatcggcatcgcaaggggtctagcatatctacacgaagagtgtgagcactgcatcatacactgcgacattaaacccgaaaacatactactcgacgaggaattccgccccaagatcgcggatttcggcatggcaaagcttcttggacgagaattcaacgcggcacttaccaccatccgaggtaccaggggctatctcgcgccagagtggctgtatgggcagccgattaccaagaaggcagacgtgtacagcttcggcatcgtgctgttcgagatgatctcagggataaggagtactgtcacgatgaaattcgggagccatcggtattaccccagctacgcggctgcgcaaatgcatgaaggagatgttctgtgcttgctggacagtaggctggaaggaaatgccaatgtggaggagctcgacatcacctgcagagtcgcctgctggtgcatccaggacagagagggtgacaggccatcgatggggcacgtcgttcgcatgttggaaggtgttgtggacacggagatgcccccaattccagcttcgtttcagaaccttgtggatggtgatgacagtgatatatacgaagaaaactggcgtttgaggacccaagattagtgccagtttcccttcctgttttcaaagggagaagtatattggtttcttgctggacctatttgatttcagcagattgatcagtcaatagaaattagacatgtatgaacttgtatgttgcagtacctgtaaatgtatagtgaaagttgctgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0223900, RefSeq:Os01g0223900

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0223900&oldid=25131"