Os01g0224000

From RiceWiki
Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0224000| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001048984.2 GI:297596354 GeneID:432671...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0224000

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001048984.2 GI:297596354 GeneID:4326711

Length

2689 bp

Definition

Oryza sativa Japonica Group Os01g0224000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6789638..6792326

Sequence Coding Region

6789883..6792300

Expression

GEO Profiles:Os01g0224000

Genome Context

<gbrowseImage1> name=NC_008394:6789638..6792326 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6789638..6792326 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgctgatggtgatggcgacggtgagctagtgcggcgcgttcggtcgccgtcttcccgtggaagaatggcgccgacgctggcgttcctcctcgtcctcctcctgctgctcgccggcggcggcggcggcggcgcgttcttggcggcggccgcgtcgacggacaccgttgtcccggggaaggggatggccgggaaccagacgctcgtctccaagaacgggcggttcgagctcgggttcttcaccccgggctccggcatccactacttcctcggcgtccggctgaggaacatggcggagtacagccccacgttctggatcggggacagggtcggcgtcatcgacctccccggcgtgtcgctcgaggtgttcggcgacaagctgtacatcaaggaggacggggtcagcctctggtggtccagcgtcgctgggaacggctcctcctcctcctcggacggcggcgccgtcgccgtcctcctcgacaccggcgacctggtggtgagggaccaagggaacccctccggcgtcctgtggcggagcttcgactaccccggcgactcgctgctccccggcggcaggctcgggctcgacgcggccaccgggacgaacgtctccctcacattcaaaggcttttcccacaatggcagcctccaggtcgacgcgagcaggaggaacgggttcgtgctcaccaccgatggcatcgacagccgcggcgccttcccggactggatggtgacctcccaagacaacggcagctcgctggtgctcaaccaccctgacgccccgaactccaccgagttcttgcagttcaatcttgggctgatcagcctgatgcggtggtcggattccaccgccggctgggtggctcgctggacgttcccctccgactgcaagtccggcgccttcttctgcggcgacttcggcgcctgcacggccggcggcggcggcggatgcgagtgcgtcgacgggttcacgccgtcgtacccggacgagtggcggctcggctacttcgtcaccggctgctcgaggtctctcccgctgagctgcgaggccaacggtcagaccgagcacgacgactccttcgccattcttgacaatctccgaggcctcccttacaatgctcaggatgaaccagtgaccactgatgaagattgcagagctgcttgcctgaacaaatgctactgtgttgcatactcgaatgaatctggatgcaagctgtggtaccacaacctgtacaatctgagctcagctgataaacctccatacagcaagatctatgtccgtttgggttccaagctcaagagcaacagggggttggccacaagatggattgtgctcttggttgttggatcattagctgtaacttcggtaatgttgggactggtgcttctatgcagatacaggagagacttgtttgcatccagtaagtttgaagtagaaggctctcttattgtctacacttatgcacagatcaggaaggctacggggaatttctctgataaacttggtgagggaggttttggaagtgttttcagggggacattgcctggatcaaccactgttgttgctgtgaagaatctgaaaggtgttgggcaagcagagaagcagttcagaacagaagtacagactgttggaatgattcgacacactaatcttgtccgtctcttgggattttgcgtcaacgggaatagaaggttgctggtttatgagtatatgtcaaatggatccttggatgctcacatcttttcagaaaaatctagtttgctgagttggcatgtccgataccaaattgcacttggtattgcaaggggtctagcctatctgcatgaagaatgtgaggactgcatcatacattgtgatattaaacctgaaaacatactacttgattatgaattttgccccaaaatctgtgattttggtatggcgaagcttcttggacgagaatttaactctgcattgaccaccgtccgagggacaatgggctatcttgcaccagagtggatatatgggcaacctattacaaaaaaggcagatgtttatagctttggcattgtgctttttgaaataatctcagggagaaggtctacggagacagtgaaatttgggagccatcgctattttcctacgtatgcagcggtacaaatgaatgaaggagatgttttgtgcttactagatagcaggctggaaggaaatgctaacgtgaaggagcttgacatcacctgtagagtggcctgttggtgcatccaggatgaagagaatgacagaccgtcgatggggcaagtcgttcgcatgttggaaggcgttgtcgatatggagatgccaccaattccagcttcatttcagaacctcatggagagtgaagacagtggtatatactctgaagaaagctggaatttcaggacccgagatcagttctag</cdnaseq>

Protein Sequence

<aaseq>MAADGDGDGELVRRVRSPSSRGRMAPTLAFLLVLLLLLAGGGGG GAFLAAAASTDTVVPGKGMAGNQTLVSKNGRFELGFFTPGSGIHYFLGVRLRNMAEYS PTFWIGDRVGVIDLPGVSLEVFGDKLYIKEDGVSLWWSSVAGNGSSSSSDGGAVAVLL DTGDLVVRDQGNPSGVLWRSFDYPGDSLLPGGRLGLDAATGTNVSLTFKGFSHNGSLQ VDASRRNGFVLTTDGIDSRGAFPDWMVTSQDNGSSLVLNHPDAPNSTEFLQFNLGLIS LMRWSDSTAGWVARWTFPSDCKSGAFFCGDFGACTAGGGGGCECVDGFTPSYPDEWRL GYFVTGCSRSLPLSCEANGQTEHDDSFAILDNLRGLPYNAQDEPVTTDEDCRAACLNK CYCVAYSNESGCKLWYHNLYNLSSADKPPYSKIYVRLGSKLKSNRGLATRWIVLLVVG SLAVTSVMLGLVLLCRYRRDLFASSKFEVEGSLIVYTYAQIRKATGNFSDKLGEGGFG SVFRGTLPGSTTVVAVKNLKGVGQAEKQFRTEVQTVGMIRHTNLVRLLGFCVNGNRRL LVYEYMSNGSLDAHIFSEKSSLLSWHVRYQIALGIARGLAYLHEECEDCIIHCDIKPE NILLDYEFCPKICDFGMAKLLGREFNSALTTVRGTMGYLAPEWIYGQPITKKADVYSF GIVLFEIISGRRSTETVKFGSHRYFPTYAAVQMNEGDVLCLLDSRLEGNANVKELDIT CRVACWCIQDEENDRPSMGQVVRMLEGVVDMEMPPIPASFQNLMESEDSGIYSEESWN FRTRDQF</aaseq>

Gene Sequence

<dnaseqindica>27..2444#ctctctctgcaactgcaagcaaagccatggccgctgatggtgatggcgacggtgagctagtgcggcgcgttcggtcgccgtcttcccgtggaagaatggcgccgacgctggcgttcctcctcgtcctcctcctgctgctcgccggcggcggcggcggcggcgcgttcttggcggcggccgcgtcgacggacaccgttgtcccggggaaggggatggccgggaaccagacgctcgtctccaagaacgggcggttcgagctcgggttcttcaccccgggctccggcatccactacttcctcggcgtccggctgaggaacatggcggagtacagccccacgttctggatcggggacagggtcggcgtcatcgacctccccggcgtgtcgctcgaggtgttcggcgacaagctgtacatcaaggaggacggggtcagcctctggtggtccagcgtcgctgggaacggctcctcctcctcctcggacggcggcgccgtcgccgtcctcctcgacaccggcgacctggtggtgagggaccaagggaacccctccggcgtcctgtggcggagcttcgactaccccggcgactcgctgctccccggcggcaggctcgggctcgacgcggccaccgggacgaacgtctccctcacattcaaaggcttttcccacaatggcagcctccaggtcgacgcgagcaggaggaacgggttcgtgctcaccaccgatggcatcgacagccgcggcgccttcccggactggatggtgacctcccaagacaacggcagctcgctggtgctcaaccaccctgacgccccgaactccaccgagttcttgcagttcaatcttgggctgatcagcctgatgcggtggtcggattccaccgccggctgggtggctcgctggacgttcccctccgactgcaagtccggcgccttcttctgcggcgacttcggcgcctgcacggccggcggcggcggcggatgcgagtgcgtcgacgggttcacgccgtcgtacccggacgagtggcggctcggctacttcgtcaccggctgctcgaggtctctcccgctgagctgcgaggccaacggtcagaccgagcacgacgactccttcgccattcttgacaatctccgaggcctcccttacaatgctcaggatgaaccagtgaccactgatgaagattgcagagctgcttgcctgaacaaatgctactgtgttgcatactcgaatgaatctggatgcaagctgtggtaccacaacctgtacaatctgagctcagctgataaacctccatacagcaagatctatgtccgtttgggttccaagctcaagagcaacagggggttggccacaagatggattgtgctcttggttgttggatcattagctgtaacttcggtaatgttgggactggtgcttctatgcagatacaggagagacttgtttgcatccagtaagtttgaagtagaaggctctcttattgtctacacttatgcacagatcaggaaggctacggggaatttctctgataaacttggtgagggaggttttggaagtgttttcagggggacattgcctggatcaaccactgttgttgctgtgaagaatctgaaaggtgttgggcaagcagagaagcagttcagaacagaagtacagactgttggaatgattcgacacactaatcttgtccgtctcttgggattttgcgtcaacgggaatagaaggttgctggtttatgagtatatgtcaaatggatccttggatgctcacatcttttcagaaaaatctagtttgctgagttggcatgtccgataccaaattgcacttggtattgcaaggggtctagcctatctgcatgaagaatgtgaggactgcatcatacattgtgatattaaacctgaaaacatactacttgattatgaattttgccccaaaatctgtgattttggtatggcgaagcttcttggacgagaatttaactctgcattgaccaccgtccgagggacaatgggctatcttgcaccagagtggatatatgggcaacctattacaaaaaaggcagatgtttatagctttggcattgtgctttttgaaataatctcagggagaaggtctacggagacagtgaaatttgggagccatcgctattttcctacgtatgcagcggtacaaatgaatgaaggagatgttttgtgcttactagatagcaggctggaaggaaatgctaacgtgaaggagcttgacatcacctgtagagtggcctgttggtgcatccaggatgaagagaatgacagaccgtcgatggggcaagtcgttcgcatgttggaaggcgttgtcgatatggagatgccaccaattccagcttcatttcagaacctcatggagagtgaagacagtggtatatactctgaagaaagctggaatttcaggacccgagatcagttctagcttcccctccagtttctcagaatgatactctcggtttctccgtggacctgcttggtgtgagcagactaatcggttagaatttaggcatgcacaaactagtttttcagcagtgaatttaggcaggtgtaaagtagtatgtcagtggaatgatcagtagagtcagtgcattaatcagtagaaactagacatgcacaaactgtatgttctagctgtaaatgcaataaaaaagttcaaaatttgctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0224000, RefSeq:Os01g0224000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0224000&oldid=25132"