Os01g0225400

From RiceWiki
Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0225400| Description = Ketopantoate hydroxymethyltransferase family protein| Version = NM_001048995.2 GI:297596363 GeneID:4326739| Length =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0225400

Description

Ketopantoate hydroxymethyltransferase family protein

Version

NM_001048995.2 GI:297596363 GeneID:4326739

Length

899 bp

Definition

Oryza sativa Japonica Group Os01g0225400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6908780..6909678

Sequence Coding Region

6908919..6909170,6909278..6909331,6909568..6909678

Expression

GEO Profiles:Os01g0225400

Genome Context

<gbrowseImage1> name=NC_008394:6908780..6909678 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6908780..6909678 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgcttctcggttgtgttggagtgtgtgccagctcctgtggcagctgctgcaacatcagcattgcaaatcccaaccattggaattggtgctggaccattctgcagtggacaggtcttagtttaccatgacttgttagggatgatgcaacatccacaccatgccaaggtcacaccgaaattctgcaaacaatttggaaatgtcggtcatgtcatcaacaaggctctatcggagtacaagcaggaagtggaaacccggagtttcccaggtcccagccatacgccgtacaagatagctgccgcggatgtggatggcttcgcgaatgcactgcagaagatgggcttggacgaggctgcaaatgctgcagctgccgcagctgaaaacgcagagaaagatggagaactacccgagaacaaatga</cdnaseq>

Protein Sequence

<aaseq>CFSVVLECVPAPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDL LGMMQHPHHAKVTPKFCKQFGNVGHVINKALSEYKQEVETRSFPGPSHTPYKIAAADV DGFANALQKMGLDEAANAAAAAAENAEKDGELPENK</aaseq>

Gene Sequence

<dnaseqindica>509..760#348..401#1..111#tgcttctcggttgtgttggagtgtgtgccagctcctgtggcagctgctgcaacatcagcattgcaaatcccaaccattggaattggtgctggaccattctgcagtggacaggttcagttattcagtatacttcacagttcacacttctacagatatatgttcattttcctcaacagtttagattaagccagttgtatctattctgattcttgcatcatttctgtcaatgcatgtgtaattttgtcctttagcttccttgaataaataacttcaataaaatctgctacgagaccttgtcgagtatacaaattttatgaagccctcatgccgaaatatttgtaatgcaggtcttagtttaccatgacttgttagggatgatgcaacatccacaccatgccaaggtaaatgacacttgacaccatcctttcaatgtcagtaagcagctttgctttgatgtgagttgtgccgagctgaacaatttgtataatcgcttactgctctactgcaggtcacaccgaaattctgcaaacaatttggaaatgtcggtcatgtcatcaacaaggctctatcggagtacaagcaggaagtggaaacccggagtttcccaggtcccagccatacgccgtacaagatagctgccgcggatgtggatggcttcgcgaatgcactgcagaagatgggcttggacgaggctgcaaatgctgcagctgccgcagctgaaaacgcagagaaagatggagaactacccgagaacaaatgatttttttttctgttggtggcttcgagcatcagagcctgccacaatgtcgccacatctctcaatgcaatcctgccaaggctgcaggggtaactgttgtcggaaacgcctgcacagtgtttgggtaatctttcctatgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0225400, RefSeq:Os01g0225400