Os01g0228800

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0228800| Description = Conserved hypothetical protein| Version = NM_001049016.1 GI:115435445 GeneID:4327191| Length = 4395 bp| Definition ...")
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Gene Name

Os01g0228800

Description

Conserved hypothetical protein

Version

NM_001049016.1 GI:115435445 GeneID:4327191

Length

4395 bp

Definition

Oryza sativa Japonica Group Os01g0228800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7103681..7108075

Sequence Coding Region

7103946..7104595,7105188..7105308,7105525..7106817

Expression

GEO Profiles:Os01g0228800

Genome Context

<gbrowseImage1> name=NC_008394:7103681..7108075 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7103681..7108075 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcaagacagtttcaggtcggtggtttgcagatccctttcaaagagtctttcctccaaaaccaaagagagcagctaccctgaaatagctcaatgtgctgtcccttgtgttgtcacattgcaacctacggtttgtcgaggctgccaaggccgggattggagcccatcacaaagcaacagggaggatatgtccatgatgttgcagaaagattacctgatggcatcctcgctctcgaggcgcttcgcggaggacctcctaagaggagccatggacctccaggattcgctcacgatgctcgagaagttccaaactgcgtcgcggagcatgagagtgtcaaacaagaagagaaggccagagggttgtgagagatcaccggacacaagtggattccgtggagccctgtcggaagcgtcaaacgccaagaagatggtgggtagaagcgccagcagtggattggatggggaattaacgaattctactgatgagctgaaaagagtgatcaaggatagcttttacaggaagaacatcttgtcggtatatcccaatgatgaacaggcttccatgagccagtcattacattacatgccaaacaagaattcgttatccaagcctaatgagcagaagaaggcagcaccaagatcattgccatcttgtgcaccagggcagtctgagaagtccaaatccccaagcttggtagcaaagctcatgggccttgatggattgcctacacacaatagcaataccttcaaaaaagacgagtcaatgaagacagtaagttcaccaagggcactttttgatattgagatgcctaaggtccagcaaaatgatgctcatatgagttctccttattcccgaaaaagtaatgtttctctgtatgattctactgtggttaatgagattggctcaatgaaaacaattaggagggaaaaaggcatagagcaacctcaaacccgagcagccaaggatatcaaggttgtatctcacacaagtcgaaagcaacaaataaaagagaccactgaaatgggcaggagaagtagtgacaaacaaagacctcattcgacttataggaacagagaagggaggaaggataccaagtctaaaacaggatcagcatctcggtctagtgctaatacagtgaaaaggcctgataagaaatcaatgattgcatcaagtagcagctcttcaacatgtcgcacaaggaagccggtcgcacgtaaagcacctagtaattcgagggagaaggcagtgtccagtagaagtcgcaagaactcaactattgatgacattgtggcatatgagctgcacagagagttcatacaagttgatggtccatccactgaacatagcgcaacacctagtgatgaaagctgccaaagtgttgttgattgggacacagagcctagcattgatggcattcgggaagatttgagtgaatcctatgaagcttcagtgactaccagctctgcggaaagaaccgattcagctaacggagatccttttcacccatcgacacacttagtatcaaaaaatgaagttgaaataaaagacgagatgagtctgcttctcctaagtgatcaaccattccttacccgggcagcagaactcattggcatcggcgaaccggggcatctgatcaaccgatataaaggtatccgcaaggcccagatgggtaaccatgagcttttcgtggacaccgcaacagagcagctggagcggaagcatcgtcagcgaaacagcttgtgttacacaggaatttggagccagaaatgcagaacagcaccatacttctcactggaggcattgctgacagatattcgcgatgcgactcgaaagctgagcatctataccgaagacgacgatggctgcactacaaaagacacactatacatgaaactggagaaggatctgagatgcacagatgcgtcgatcaacagcgtgtgggatatgggctgggaagattggattttcatggaggaaacacaatgcttcataagagatgttggggagagcattttatcagggcttatcgaagaagctgctctggacatgtgggtacattga</cdnaseq>

Protein Sequence

<aaseq>MHQDSFRSVVCRSLSKSLSSKTKESSYPEIAQCAVPCVVTLQPT VCRGCQGRDWSPSQSNREDMSMMLQKDYLMASSLSRRFAEDLLRGAMDLQDSLTMLEK FQTASRSMRVSNKKRRPEGCERSPDTSGFRGALSEASNAKKMVGRSASSGLDGELTNS TDELKRVIKDSFYRKNILSVYPNDEQASMSQSLHYMPNKNSLSKPNEQKKAAPRSLPS CAPGQSEKSKSPSLVAKLMGLDGLPTHNSNTFKKDESMKTVSSPRALFDIEMPKVQQN DAHMSSPYSRKSNVSLYDSTVVNEIGSMKTIRREKGIEQPQTRAAKDIKVVSHTSRKQ QIKETTEMGRRSSDKQRPHSTYRNREGRKDTKSKTGSASRSSANTVKRPDKKSMIASS SSSSTCRTRKPVARKAPSNSREKAVSSRSRKNSTIDDIVAYELHREFIQVDGPSTEHS ATPSDESCQSVVDWDTEPSIDGIREDLSESYEASVTTSSAERTDSANGDPFHPSTHLV SKNEVEIKDEMSLLLLSDQPFLTRAAELIGIGEPGHLINRYKGIRKAQMGNHELFVDT ATEQLERKHRQRNSLCYTGIWSQKCRTAPYFSLEALLTDIRDATRKLSIYTEDDDGCT TKDTLYMKLEKDLRCTDASINSVWDMGWEDWIFMEETQCFIRDVGESILSGLIEEAAL DMWVH</aaseq>

Gene Sequence

<dnaseqindica>3481..4130#2768..2888#1259..2551#tggcagcagtaggaggtcactgcactagcccacatgccgctgcagtagctagtcgtcgtagcagcagcagtatactactagtagtagccttcttggccttcttcttcttcttcttgcacagatcttgggggcgcaatcagccagttgcaggcttgcagcagacgaacctcggagagagaggcctgcgttcttgcgaaagaggagctagaggtgggtgccatttattcccgtcttcgttcttggcttttgtttttggttgtaaactgacaatttgggggttggggattgagttgataatcggagatagtcatatagatggtttctgaaaaaaagcttctgtgagttcatttgcttggccactctggtttttttgattgtttacttgggggaggtaacaacaagaagaatgcaggggacttcttgtttattggtcatcttgtttagctagttaatttgggggttttttttttggcgctctacagtaaaatttggaggattccatgtctttggggagataaaataaactgtccagtgttgatacatgattcattacactgttgtaataggcagtctgggatttttggtttaggatttgcatgtttgattttacagtatgggagtcatgtacagagttaatgagagcgaatgacctctaactacaaactactaccttccagcttccatcaccttgattcactttccccctttcccttttcacctttctataagagaaaagtgtagtgtactgcttgtgagctatcagttctttattcttgacatgatccatatgaaattcgagcactggtgaatcgagagaagaggccaggtaggtagctggtcaatgcatggatattccgtgggcagatagagaaccctcgtagtagctttctttcttgtaaccacttcttccactgcttctccttgacattcaatttctctgcattatttcttgcaaaagataaaccttggtatatgatatcctaattttctatatttccctctgtaagagtagctttcttgtgatttgcagcttcaggataaagcagacaccaattcctcaaggaaacaagttcttaaattgacacctccttcataaactattttataaagattcaaagataatgtaacctttcctccctcctcagtctgacctgtgggataatttgttcacttgaatttgtttatcatctgttgctattttctgaccatttcggtttgtcaatttgcctttcttatgttgctccagagaatagagaaaatgcatcaagacagtttcaggtcggtggtttgcagatccctttcaaagagtctttcctccaaaaccaaagagagcagctaccctgaaatagctcaatgtgctgtcccttgtgttgtcacattgcaacctacggtttgtcgaggctgccaaggccgggattggagcccatcacaaagcaacagggaggatatgtccatgatgttgcagaaagattacctgatggcatcctcgctctcgaggcgcttcgcggaggacctcctaagaggagccatggacctccaggattcgctcacgatgctcgagaagttccaaactgcgtcgcggagcatgagagtgtcaaacaagaagagaaggccagagggttgtgagagatcaccggacacaagtggattccgtggagccctgtcggaagcgtcaaacgccaagaagatggtgggtagaagcgccagcagtggattggatggggaattaacgaattctactgatgagctgaaaagagtgatcaaggatagcttttacaggaagaacatcttgtcggtatatcccaatgatgaacaggcttccatgagccagtcattacattacatgccaaacaagaattcgttatccaagcctaatgagcagaagaaggcagcaccaagatcattgccatcttgtgcaccagggcagtctgagaagtccaaatccccaagcttggtagcaaagctcatgggccttgatggattgcctacacacaatagcaataccttcaaaaaagacgagtcaatgaagacagtaagttcaccaagggcactttttgatattgagatgcctaaggtccagcaaaatgatgctcatatgagttctccttattcccgaaaaagtaatgtttctctgtatgattctactgtggttaatgagattggctcaatgaaaacaattaggagggaaaaaggcatagagcaacctcaaacccgagcagccaaggatatcaaggttgtatctcacacaagtcgaaagcaacaaataaaagagaccactgaaatgggcaggagaagtagtgacaaacaaagacctcattcgacttataggaacagagaagggaggaaggataccaagtctaaaacaggatcagcatctcggtctagtgctaatacagtgaaaaggcctgataagaaatcaatgattgcatcaagtagcagctcttcaacatgtcgcacaaggaagccggtcgcacgtaaagcacctagtaattcgagggagaaggcagtgtccagtagaagtcgcaagaactcaactattgatgacattgtggtatgcatcttctattatagcatagcctggaaatattttattcatctgaaatattaaactattttggaacattgtaccctcagatttaaaaacaacatttatcttatttttccctttagaagtttcagttaaatcattcagaccttgaattggaacagttcgttgaaataatttatttcgcttaaatcacgggatctttttttgctcctaacgtaggcatatgagctgcacagagagttcatacaagttgatggtccatccactgaacatagcgcaacacctagtgatgaaagctgccaaagtgttgttgattgggacacagagcctagcattgatggtaaggaacgctgaatttcttttcattcttctaaacatgttttcatttttatttgtcactaatacaatttgaagcctgtgaagtaagaaaatttcaaatattgaacttcaatcgaatgttgaaatttggaataaaccatttagtgaggaatttgctgcttatttgcaagtggaatgtgacagttttggaattcacatgcagcgggtgtgacagttttgtcccgccaagccagcgagggtggcgtggccaaataacgctgccacgccagtcgccagctagaccagcgtgaccaaaaaacgttgccacaccagctagaccggcgtgacagtattgttttgccacgctagtttagctggcgtagccaaaagattcagatcatgtaaataagttttgatagggtttatttttaaaattaaaaattaaaaaaaaatcattccgctttaactattgtagacattaattccacttctatttacaggtttgtatctaataacagtccaagatgattaatttcaccacttaaaaacctaaatgttctctcttgcaatgaaaataggtgtttccacactaaacagaaatcttttcatgacaggcattcgggaagatttgagtgaatcctatgaagcttcagtgactaccagctctgcggaaagaaccgattcagctaacggagatccttttcacccatcgacacacttagtatcaaaaaatgaagttgaaataaaagacgagatgagtctgcttctcctaagtgatcaaccattccttacccgggcagcagaactcattggcatcggcgaaccggggcatctgatcaaccgatataaaggtatccgcaaggcccagatgggtaaccatgagcttttcgtggacaccgcaacagagcagctggagcggaagcatcgtcagcgaaacagcttgtgttacacaggaatttggagccagaaatgcagaacagcaccatacttctcactggaggcattgctgacagatattcgcgatgcgactcgaaagctgagcatctataccgaagacgacgatggctgcactacaaaagacacactatacatgaaactggagaaggatctgagatgcacagatgcgtcgatcaacagcgtgtgggatatgggctgggaagattggattttcatggaggaaacacaatgcttcataagagatgttggggagagcattttatcagggcttatcgaagaagctgctctggacatgtgggtacattgatctgggaaaatgaagcctaggtggttcttgcgttcttggagaatttctagctttgttctccacttggctggcacttctcatgatttccagtttccagtttgtatctatcttgtgttacatttcacctgtgtaaaaaatgaaaaatgtgcaatgatttagagagttgcctaaagaagtgatggagttgtcttcaccaagaaacaattgtaatttgtgcacaaggtatgaaggcatgatgaatagacaaagagcaatgtttcgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0228800, RefSeq:Os01g0228800