Os01g0229300

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0229300| Description = Embryonic flower 1-like protein| Version = NM_001049020.1 GI:115435453 GeneID:4325878| Length = 6201 bp| Definition...")
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Gene Name

Os01g0229300

Description

Embryonic flower 1-like protein

Version

NM_001049020.1 GI:115435453 GeneID:4325878

Length

6201 bp

Definition

Oryza sativa Japonica Group Os01g0229300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7157165..7163365

Sequence Coding Region

7158152..7158336,7159416..7159846,7159933..7161041,7161352..7162800

Expression

GEO Profiles:Os01g0229300

Genome Context

<gbrowseImage1> name=NC_008394:7157165..7163365 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7157165..7163365 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagattgttgcagtagatcaggagggagctcgtgttgttgggacgaactgtatgcttgctcgtggtggaactggtgctgtagcgccagtgttggagctgacagcgacgcctcgtcaggatgcagccgctgaagctggtgtagacgaaccggcacaacaccaatgcgagcatttctccataagagggtatgttgctcttcttcagaagaaggatccaaaattctgctctctatctcggattttccatgaccagaaaaaatgtgatgaacacaaagctagttcaagcccattttctgtagcaaagtttcgacgatgggattgctcgaagtgcttggataagttgaaaacttcagataatggaacagcaccaagaactcttcccgcaaagcagaatggcacaagtgatggttgctccatcacatttgttcggagcacttttgtgcctgctagtgttggttcccaaaaagtgtctcctagcacacaatcatctcaagggaagaatgctgatagatcaactcttccaaagagtgtgcaagaaggcaatgactccaaatgcaatgcgccttctggcaagaatggagctgctgaggccaatactgattcaccaatgaaagatttgcaagggccagcccaaaattatgatgtggcagcaaatgtctctgaggacaacacttctgttgatgttggggctttacctgaagttccccagattacatggcacatagaagtaaatggtgcagatcaacctccatccactccaaaactttctgaagtggtcctcaaaagaaatgaagatgaaaatggaaaaactgaagagactcttgttgctgagcagtgcaatttgaccaaagatcctaacccaatgtctggaaaggaacgtgatcaggttgctgagcagtgcaatttgaccaaagatccgaaaccagtgtctgggcagaaatgtgagcagatctgcaatgagccatgtgaagaagttgttctcaaaagaagctccaaatctaagaggaagacggataagaagttgatgaagaagcagcagcacagcaagaaacgcactgcccaggctgatgtttcagatgcaaagctttgtcggagaaagccaaaaaaggtgcggcttctatcagaaattataaatgctaaccaggttgaggattctagaagtgacgaagttcatcgtgaaaatgccgctgatccctgtgaggatgatagaagtaccatcccggtcccgatggaagtaagcatggatattcctgttagcaaccatacagtgggagaagatgggttaaaatcaagtaagaacaagacaaaacgcaaatactctgatgttgtagatgatggatcatcacttatgaactggctgaatggaaaaaagaaaagaactggaagtgtgcatcacacagttgctcatccagctgggaatttgagcaacaaaaaagtgacacccactgcgagtactcagcatgatgatgagaatgatactgaaaatggtcttgacacaaatatgcataagacagatgtctgtcagcatgtatcagaaatctccacacagaggtgctcatcaaaggggaaaacagcgggtttgagtaaggggaaaacacattcagctgctagtaccaaatatggtggtgaaagcaccagaaatggtcagaacatacatgtactcagcgcagaagatcaatgccagatggaaaccgaaaactctgttctgagtcactcggcaaaggtttctccagctgagcatgatatccaaattatgtctgaccttcatgagcagagtctacccaagaagaaaaagaagcaaaaacttgaagtgactcgtgaaaaacagaccatgatagatgacatccccatggatattgttgaactgctagctaaaaaccagcatgagaggcagcttatgactgagactgattgttctgacatcaaccgtattcaatccaagacaactgctgatgatgattgtgtaatagtagctgccaaggatggttcagattatgcatcaagtgtgtttgacactaattcccaacagaagtccttggcatcccaaagtacacagaaggagttacagggtcatttggcattgaccacacaagagtctccacatcctcagaactttcagtctactcaggaacagcagacacatttgcggatggaagaaatggtcactattgctgcaagctcaccactattttcacatcatgatgatcagtatattgctgaagcaccaactgaacattggggccgtaaggacgcaaagaagctaacgtgggagcaatttaaggccactacaagaaattctccagcagcaacatgtggtgctcaatttagacctggtatccaagcagttgacttgacttctactcatgtcatgggatcttccagcaattatgcatctcgccaaccagtaattgcgccactggaccgctatgctgaaagagcggttaaccaggtccatgcaagaaattttccaagcacaatagcaaccatggaagcgagtaagttatgtgatcggagaaatgctggacaagtagtcttgtatcctaaagaatccatgcctgcgacgcatcttctgagaatgatggatccatcaacattagcaagcttccccaactatggaacttctagcaggaaccagatggagtctcaacttcataattctcagtatgcacataatcagtacaaaggatcaaccagcacatcatatggcagtaacctgaatggaaagattccattgacattcgaagacttatcacggcatcagctgcatgatctgcacagacctttacgcccacatcctagagttggtgtgcttggctccttgctgcagaaggaaattgcaaactggtcggagaactgtggcacacaatctggttataagttaggagtgtcaacaggaataacatcgcatcagatgaacagaaaggaacattttgaagccctgaattctggaatgttttcagcaaaatggaatgcattgcagttgggttctgttagctccagtgcagattttttatcagcgaggaacagcatagctcaatcttggaccagaggcaagggtaaaatggttcatcccttggatcggtttgtgagacaggatatctgtataactaacaagaacccagctgattttactacaatcagtaacgataacgagtatatggattaccgctga</cdnaseq>

Protein Sequence

<aaseq>MEIVAVDQEGARVVGTNCMLARGGTGAVAPVLELTATPRQDAAA EAGVDEPAQHQCEHFSIRGYVALLQKKDPKFCSLSRIFHDQKKCDEHKASSSPFSVAK FRRWDCSKCLDKLKTSDNGTAPRTLPAKQNGTSDGCSITFVRSTFVPASVGSQKVSPS TQSSQGKNADRSTLPKSVQEGNDSKCNAPSGKNGAAEANTDSPMKDLQGPAQNYDVAA NVSEDNTSVDVGALPEVPQITWHIEVNGADQPPSTPKLSEVVLKRNEDENGKTEETLV AEQCNLTKDPNPMSGKERDQVAEQCNLTKDPKPVSGQKCEQICNEPCEEVVLKRSSKS KRKTDKKLMKKQQHSKKRTAQADVSDAKLCRRKPKKVRLLSEIINANQVEDSRSDEVH RENAADPCEDDRSTIPVPMEVSMDIPVSNHTVGEDGLKSSKNKTKRKYSDVVDDGSSL MNWLNGKKKRTGSVHHTVAHPAGNLSNKKVTPTASTQHDDENDTENGLDTNMHKTDVC QHVSEISTQRCSSKGKTAGLSKGKTHSAASTKYGGESTRNGQNIHVLSAEDQCQMETE NSVLSHSAKVSPAEHDIQIMSDLHEQSLPKKKKKQKLEVTREKQTMIDDIPMDIVELL AKNQHERQLMTETDCSDINRIQSKTTADDDCVIVAAKDGSDYASSVFDTNSQQKSLAS QSTQKELQGHLALTTQESPHPQNFQSTQEQQTHLRMEEMVTIAASSPLFSHHDDQYIA EAPTEHWGRKDAKKLTWEQFKATTRNSPAATCGAQFRPGIQAVDLTSTHVMGSSSNYA SRQPVIAPLDRYAERAVNQVHARNFPSTIATMEASKLCDRRNAGQVVLYPKESMPATH LLRMMDPSTLASFPNYGTSSRNQMESQLHNSQYAHNQYKGSTSTSYGSNLNGKIPLTF EDLSRHQLHDLHRPLRPHPRVGVLGSLLQKEIANWSENCGTQSGYKLGVSTGITSHQM NRKEHFEALNSGMFSAKWNALQLGSVSSSADFLSARNSIAQSWTRGKGKMVHPLDRFV RQDICITNKNPADFTTISNDNEYMDYR</aaseq>

Gene Sequence

<dnaseqindica>988..1172#2252..2682#2769..3877#4188..5636#cgcggctgtcggagcaaacgcaaaccccccaggtaatcaacgaacttttcctccgccgcaagaacagctcccgcggggggtttggttttgaccgatttcttcccccctccccccaaatcgacccatccaatttcgcctcgatttacttccgatttccccacttttttttcttcctttcgggttggggggttgcggttttgggggaggagaggggttcagctcatccgaagccccacgttaggtccgccccctttccagctgtgcccctctctcgggcctcgagctcctcgcctccatgggaaccaaagcccttatatttcatgtcgcggaagaaaaaaaaatcccgtcttttgcggggatcctcgcggctacgtacgagccctagttaccgcgcggattttagttacggcggtttatgcggcccctccctctaggttttagatctacccatctctctctctctctctctctctctctctgtgcatgcatgtgtctatcttagctatacctgtattatttggaaggttaattatggttgtgtatatgtggcgcggtaattaattagtttaattcgcaccccctctctctttgtttatctaggttttgggggaatttatttcttgctataattttgcccgctcgaatttctggtgctcttatattccatgagctgattgaagtggatatatattgtgcgtgcgtgcgtgctattgctacatcggcttgacttcttcttgcctactacttcattaatttgtttcttctggtttctgtttcaggttgttctagcgtgtgcagcggctagctgattgattgtcttctgtgatatatccagagctcgtgttttgtggtttgtggtttgtggtttgtgcttggattgttgatgtgctaattcgcggcgttacaagatcactgctggattgatattgagttgtgcctcggctgtgctagctgtgtgttgattctctcctcgtcgtggtgatcgatatggagattgttgcagtagatcaggagggagctcgtgttgttgggacgaactgtatgcttgctcgtggtggaactggtgctgtagcgccagtgttggagctgacagcgacgcctcgtcaggatgcagccgctgaagctggtgtagacgaaccggcacaacaccaatgcgagcatttctccataaggtaatcattttctgtatttccaattccagtatcgcgttgtggatgaataatgaatcggcatgtcatgccatattgcactgtttgatggaagagtatgattgatcgtggtttttgcacagtttgctgttgggacttatatggtcatctgttttgtacgatcgtatacactgggtcgacatgcttatgactttggttcgatttaggaagtcaatacatccactactagctctatatctagccatgtgaactcatttatgccatagcacagctagcaggctagcagcaaaaaatatatataatatttgcatatatgttggtgtttcatgtatctttatactctacgtacatccattaatatcttcaatgtatgaatctgagcacatgattgtgagtgctacacatatgcatgtctgtatgtgtgttcattaggtgtttgatcatatttgtttgtgttggggtgcgcatgcatttattcaggccatgctgtaggctgtagctagatatttgtgtttgtatattatttctgttgaacaagctgattactaatgaaattaacctttttggggtacactcatatattgggccctacatttttgtaatcatttttcctttgtgctgaggttcagcataaaacttttttatcataagcatgtttacatcctaggagattcttagaactgatggtttcttcatatttgcattatgtttgatttgatagtccattattattttaagccttttcaattgtttagagattctagagatgatatatatcaaccatagacttgtcacgttttggtttaatactttctagaactaattagattattatttttgtagtttatcctgtcatgctatttgtattatctttgaattcaaactgcaatacttagattatcttgaaggtcctctttttctggactgtacaagctatgtatgaaatgcctacctcccagcatcctttagattatgtagggccttttctgagtttatcagttgtatattgactgaagcacgcaatgtgctatatatatgtgccatgcatctttataatgataatcttatttttcttgtaccagagggtatgttgctcttcttcagaagaaggatccaaaattctgctctctatctcggattttccatgaccagaaaaaatgtgatgaacacaaagctagttcaagcccattttctgtagcaaagtttcgacgatgggattgctcgaagtgcttggataagttgaaaacttcagataatggaacagcaccaagaactcttcccgcaaagcagaatggcacaagtgatggttgctccatcacatttgttcggagcacttttgtgcctgctagtgttggttcccaaaaagtgtctcctagcacacaatcatctcaagggaagaatgctgatagatcaactcttccaaagagtgtgcaagaaggcaatgactccaaatgcaatgcgccttctggcaagaatggagctgctgaggccaatactgattcaccaatgaaaggtatggtagatgtagagcctttcaaattcctaagtaggattttatttaaggtatagaataaactaatgtttgtgtgattttctcagatttgcaagggccagcccaaaattatgatgtggcagcaaatgtctctgaggacaacacttctgttgatgttggggctttacctgaagttccccagattacatggcacatagaagtaaatggtgcagatcaacctccatccactccaaaactttctgaagtggtcctcaaaagaaatgaagatgaaaatggaaaaactgaagagactcttgttgctgagcagtgcaatttgaccaaagatcctaacccaatgtctggaaaggaacgtgatcaggttgctgagcagtgcaatttgaccaaagatccgaaaccagtgtctgggcagaaatgtgagcagatctgcaatgagccatgtgaagaagttgttctcaaaagaagctccaaatctaagaggaagacggataagaagttgatgaagaagcagcagcacagcaagaaacgcactgcccaggctgatgtttcagatgcaaagctttgtcggagaaagccaaaaaaggtgcggcttctatcagaaattataaatgctaaccaggttgaggattctagaagtgacgaagttcatcgtgaaaatgccgctgatccctgtgaggatgatagaagtaccatcccggtcccgatggaagtaagcatggatattcctgttagcaaccatacagtgggagaagatgggttaaaatcaagtaagaacaagacaaaacgcaaatactctgatgttgtagatgatggatcatcacttatgaactggctgaatggaaaaaagaaaagaactggaagtgtgcatcacacagttgctcatccagctgggaatttgagcaacaaaaaagtgacacccactgcgagtactcagcatgatgatgagaatgatactgaaaatggtcttgacacaaatatgcataagacagatgtctgtcagcatgtatcagaaatctccacacagaggtgctcatcaaaggggaaaacagcgggtttgagtaaggggaaaacacattcagctgctagtaccaaatatggtggtgaaagcaccagaaatggtcagaacatacatgtactcagcgcagaagatcaatgccagatggaaaccgaaaactctgttctgagtcactcggcaaaggtacgaattttgtgaatcatgaggaatttttgctttttaaattgactgaatcaacatttatctgtatgaaggaataatattggtgcataacaatgttaagaaatatgcatacaatgtttatttatatgctttccactgttcttctttacttatgttttgatactctttttgtgtgtgcgtgcatgtgtgcatgtgtgtgtgtgtgtgtgtgtgcgcgcgtgtgtgtgcacgtgcgtggcgcaatattcttttttagactcatattatagtgattgtaatggactgacattttcctcatttctcatctcaggtttctccagctgagcatgatatccaaattatgtctgaccttcatgagcagagtctacccaagaagaaaaagaagcaaaaacttgaagtgactcgtgaaaaacagaccatgatagatgacatccccatggatattgttgaactgctagctaaaaaccagcatgagaggcagcttatgactgagactgattgttctgacatcaaccgtattcaatccaagacaactgctgatgatgattgtgtaatagtagctgccaaggatggttcagattatgcatcaagtgtgtttgacactaattcccaacagaagtccttggcatcccaaagtacacagaaggagttacagggtcatttggcattgaccacacaagagtctccacatcctcagaactttcagtctactcaggaacagcagacacatttgcggatggaagaaatggtcactattgctgcaagctcaccactattttcacatcatgatgatcagtatattgctgaagcaccaactgaacattggggccgtaaggacgcaaagaagctaacgtgggagcaatttaaggccactacaagaaattctccagcagcaacatgtggtgctcaatttagacctggtatccaagcagttgacttgacttctactcatgtcatgggatcttccagcaattatgcatctcgccaaccagtaattgcgccactggaccgctatgctgaaagagcggttaaccaggtccatgcaagaaattttccaagcacaatagcaaccatggaagcgagtaagttatgtgatcggagaaatgctggacaagtagtcttgtatcctaaagaatccatgcctgcgacgcatcttctgagaatgatggatccatcaacattagcaagcttccccaactatggaacttctagcaggaaccagatggagtctcaacttcataattctcagtatgcacataatcagtacaaaggatcaaccagcacatcatatggcagtaacctgaatggaaagattccattgacattcgaagacttatcacggcatcagctgcatgatctgcacagacctttacgcccacatcctagagttggtgtgcttggctccttgctgcagaaggaaattgcaaactggtcggagaactgtggcacacaatctggttataagttaggagtgtcaacaggaataacatcgcatcagatgaacagaaaggaacattttgaagccctgaattctggaatgttttcagcaaaatggaatgcattgcagttgggttctgttagctccagtgcagattttttatcagcgaggaacagcatagctcaatcttggaccagaggcaagggtaaaatggttcatcccttggatcggtttgtgagacaggatatctgtataactaacaagaacccagctgattttactacaatcagtaacgataacgagtatatggattaccgctgaagcagaaagtggtgtgcataattcctgaacatttacaatcatacatttcatctttatggcgccaaatagtcatactgtaagaggagggctttgctggatctgctgtaaggtaagttgaactttttcttcttgcaagtttatcagtttaagaaaaaagaatgattacttatgttagcaaggatggttcttgcaggcttcttgtaagttgtggatgccccattttctggatgggaacctgccagacagtgaacaagggctttgcaaggtgcagcatccggtttttgttttgccagtccaagaaacgtcctcctgttactttgtagttgtactcatactagtgcgcttgtttgtacaaggagaaatgtgtaaccttgttgaaaaaatgtctcccccattttgtaattaccataaggaggtttatagtgttgtgagctgtgtgtgactgacggcgagaaatggttttgtcggtgttaaggttgaaacgactagctctcgttatcaatgtgttgtaaacttctagattgatgtgttaccttactcttgaagtcaacaccggagaatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0229300, RefSeq:Os01g0229300