Os01g0229700
| Gene Name |
Os01g0229700 |
|---|---|
| Description |
U box domain containing protein |
| Version |
NM_001049024.1 GI:115435461 GeneID:4325882 |
| Length |
6609 bp |
| Definition |
Oryza sativa Japonica Group Os01g0229700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:7176335..7182943 |
| Sequence Coding Region |
7176335..7176352,7176482..7176736,7177332..7177595,7177671..7177790,7177890..7178021 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:7176335..7182943 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:7176335..7182943 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggggccgacgccgacgtactcgtcggtggtggcgcacacagcggcgttcctcgcggagctcatcgccgacccgctcctccggcgacacctgctctccgccgccgcggcggcgggcggcgtggggcggaagcagcggcagcacccggcggcgacgctgcaggcgctgtcgctcgtgtcggacgcgctcgacaccgccgcgtccgcgccgccgtcgctgtcctccctccgcgccgccgagcggctgctgctgtcgctccccgtcgcgacccctttgtcgtgcctcctcctcgcgctcgcgtccgcctcgcgccgccgcggcggggcggcggcggcggcggcggccgcggtgctggacctcttcgcgctcgacccggcgctcgcgcggcacgagctcgcgccggcggccttcgaggcgctcttcgcgccgcgcctcctccccgtcatgcgccacttcgccgcgcgccgcgcgtccaccgccgccgccgcggcggaggcggcgtcccatcgcggcgaggacgggtccgtggagaccgccgcgatgtcggcgatgagggttctctccctgatgagcggcgcccaggcgcaggagatgagggacctggagcgcgagtacgagaaggtgctcgacgcgaactgcatagcgtacgcgctctacctaaagaagatccttgaaaccggcgacgcggcgaaggagacgtactccccgccgccaccgcctccagagctcgtattcggcgtcggagacgacgaccaggacggcgacgtcgacgacgagaccacggcggagaccgacgagaccgtcagctcgcagaacgacgtacggtacaacccgatctgggcggacgccgacgaggcggccgacctgtacccgcggcagggcagcggcaaggggtggagggagctgatgcggccgccgagcctgtacccgcagcgcgtgccgccgcacctcatagtgcagcagcagcagtcgtcgccgtcgccgaccggcagaggaagcccggtggcgaggctgcgcgccgggcactcgccggcgacgccttcttccgacgtcagcatggaggactccccctcctcctccgagctcctcgccggcagagaggaaaagcacacggcctcgccgctgtcacggcctgcaggcagagcgcgtccacgcggcgaggaagacgacgacgacgacgtcgccgccatgctctctccggagcacgcgagttctgtgatgggcggcgacggcggcggcgacgtggcgcggcggccggtggtggcgacgcccaaggacttcgtgtgcccgatcacgagccaggtgttcgacgaccccgtcacgctcgagaccgggcagacgtacgagcgccgcgccatccaggagtggctcgaccgcggcaacgccacctgccccatcacgcgccaccgcctccacggcgcccacctccccagcaccaactacgtcctcaagcgcctcatcgccgcctggcgcgaccagaaccccgccgcctcctcctccgcgcccacgccgccgccgccggcgacgacgacgatggatagccccgccgccgcggccccgttcaagatcagctcgccgtcgccggacgccaccgtgagccaggccagcgcgccgtcgccgaccagcgtcatcgcgcaggcgtccctcgacagcgcagtcggcgagctccgcgccgcggtgtcctgcctctgcacgtcggaggagctcgccgactcggagaggtcggtgctccggatcgagcggctatggcgcgaggccgccggtgccgagcacgtcgtcctcgccgcgctcgccaagcccgccgtcgtcaacggcttcgtggagatcctcttcaactccgtgagcgcgcaggtgctccaggtggccgtcttcctcctcgccgagctcgcctcccgcgacgacgccgtcgtgcagacgctgacgagggtggactccgacgtggactgcctcgtcgcgctcttcaagaagggcctcgtcgaggccgtctcgctcatccacctcctctccccctcgccggagcagcttgtcgagatggacatggccgacgcgctggtcgccaccatccggcgaggcggcggcgacgacgacggcggcgcggtggtcaagatgtgcgtcaagccgaaggccgcgtcggtgatcctcctgagtcagatcctcgtcgaaggcggccgggacagctcgtcgccggcggtggccaagtccgccctggtctccgagaggttcatcaggagcgtggcggcgagcttggaagccgagcaggtggaggagagggtcgccgccgtgaggatcctactgcggtgcgtcgccgaggacggccattgccggagcagcatcgtcgagaactcggccctcgccgccgtcctcgacgcgttccacgtcgtcggcgacgccgacaagttcgacatcgtgcggctcctctccgaactgctcaagctcaaacggcgatcagctgctgatcgtcttcttcggacgatcaaggaggcgagctccttcagcatgatgcacacgcttctcgtgtacctgcaatccacgacaccggagcagagccctgtcgttgcagggctacttcttcagctagatctcctagtggagccgaggaagatcagcatgtacagggaggaagcagtggacagcctcatccagtgcctcaagaactcggattacccgagaagccagctgctcgccgccgagactatcatgaatctctccggcaagttctcctcgtcgggccggccactctcacgctcatcgctgcttaagcttgccagggtgaaagagaggcaccggccgtcgcacgatctcagcatttctcgcggcgccggcgaggacgaaatggaggaagagaaggcggcggcggagtgggagaggaaggcggcgtacgcgctggtcagccatgagttcgggctggtgttcgaggcgctgtcggggtgcctcgcggcggccaagaacggcgagctgttcacggcgagcctcgtgtcggcggcatggctggtccgcatgctccccctcctccccgacaccggcgtgctcggcgccgccagggtgtgcctgctccggcagctcgtgctcgtcctccggtcaggcaagcacggcagcgacagggccctcgccatggtggccctcaggagcttcatgaacgatcgcgaggggatgcacgagatcacgacgtacatcaaggacgtgctcaggacgctcagggagctgaagaaatcgtccggcctcgcgttcgagatgctcaagctgctgtcagatggacaagaatccagcattgatatgtggaatcacaaggagctcaatcacgcagactgcagctcgaatggtgaggtcacatcgatcgcctacttcaagggctacatcttctccggccactctgatggaacactaaaggtctgggagggaagtgagaatatccttcgcctagtccatgaatcccaagaacacacgaaagcaatcaccagcttagcagtgctacactcagaggagaaactgttcagtggatcactggatagaactatcagagtgtggcagctccgagacgccctccggtgcgtcgaggtccacgacgccaaggacccggttcagagcctcgccgtcgccgccgccatggcctgcttcgcgccgcagggctccggcgtcaaggtgctaagctggaacaatggtggcggcgccaaggtcctgaacgcgagcaaggtggtgagatccatggcgctggtgcacgggaagctcttctgcggctgcaacgacggcggcgtgcaggagatcgacctggcgagcgggacgatcggcgtgatccagcaagggagcaagaggatcatcggcaaggccagcccgatctactctctgcatcttcacggcgacctcctctacaccggcagcacctcgctcgacggcgcatcagtcaagatatggagcagctcgaactacagcctggtcgggacgataccgtcgtcggtggaggtgaggtcgctggtggtgagctcggacctggtgtacctcggctccaggaatggcgtcgtggagatctggtcgagggagaagctgaccaggatcggcgctctccaggccggcggcggcggcggcagcggccgggtccagtgcatggccgtcgacgccgacggcgatgtcatcgtcgtcgggacatcggacggcagaattcaggcttggggattgacttga</cdnaseq> |
| Protein Sequence |
<aaseq>MAGPTPTYSSVVAHTAAFLAELIADPLLRRHLLSAAAAAGGVGR KQRQHPAATLQALSLVSDALDTAASAPPSLSSLRAAERLLLSLPVATPLSCLLLALAS ASRRRGGAAAAAAAAVLDLFALDPALARHELAPAAFEALFAPRLLPVMRHFAARRAST AAAAAEAASHRGEDGSVETAAMSAMRVLSLMSGAQAQEMRDLEREYEKVLDANCIAYA LYLKKILETGDAAKETYSPPPPPPELVFGVGDDDQDGDVDDETTAETDETVSSQNDVR YNPIWADADEAADLYPRQGSGKGWRELMRPPSLYPQRVPPHLIVQQQQSSPSPTGRGS PVARLRAGHSPATPSSDVSMEDSPSSSELLAGREEKHTASPLSRPAGRARPRGEEDDD DDVAAMLSPEHASSVMGGDGGGDVARRPVVATPKDFVCPITSQVFDDPVTLETGQTYE RRAIQEWLDRGNATCPITRHRLHGAHLPSTNYVLKRLIAAWRDQNPAASSSAPTPPPP ATTTMDSPAAAAPFKISSPSPDATVSQASAPSPTSVIAQASLDSAVGELRAAVSCLCT SEELADSERSVLRIERLWREAAGAEHVVLAALAKPAVVNGFVEILFNSVSAQVLQVAV FLLAELASRDDAVVQTLTRVDSDVDCLVALFKKGLVEAVSLIHLLSPSPEQLVEMDMA DALVATIRRGGGDDDGGAVVKMCVKPKAASVILLSQILVEGGRDSSSPAVAKSALVSE RFIRSVAASLEAEQVEERVAAVRILLRCVAEDGHCRSSIVENSALAAVLDAFHVVGDA DKFDIVRLLSELLKLKRRSAADRLLRTIKEASSFSMMHTLLVYLQSTTPEQSPVVAGL LLQLDLLVEPRKISMYREEAVDSLIQCLKNSDYPRSQLLAAETIMNLSGKFSSSGRPL SRSSLLKLARVKERHRPSHDLSISRGAGEDEMEEEKAAAEWERKAAYALVSHEFGLVF EALSGCLAAAKNGELFTASLVSAAWLVRMLPLLPDTGVLGAARVCLLRQLVLVLRSGK HGSDRALAMVALRSFMNDREGMHEITTYIKDVLRTLRELKKSSGLAFEMLKLLSDGQE SSIDMWNHKELNHADCSSNGEVTSIAYFKGYIFSGHSDGTLKVWEGSENILRLVHESQ EHTKAITSLAVLHSEEKLFSGSLDRTIRVWQLRDALRCVEVHDAKDPVQSLAVAAAMA CFAPQGSGVKVLSWNNGGGAKVLNASKVVRSMALVHGKLFCGCNDGGVQEIDLASGTI GVIQQGSKRIIGKASPIYSLHLHGDLLYTGSTSLDGASVKIWSSSNYSLVGTIPSSVE VRSLVVSSDLVYLGSRNGVVEIWSREKLTRIGALQAGGGGGSGRVQCMAVDADGDVIV VGTSDGRIQAWGLT</aaseq> |
| Gene Sequence |
<dnaseqindica>6592..6609#6208..6462#5349..5612#5154..5273#4923..5054#4712..4828#4505..4629#4044..4353#3414..3662#3177..3321#1609..2838#1401..1510#927..1196#1..834#atggcggggccgacgccgacgtactcgtcggtggtggcgcacacagcggcgttcctcgcggagctcatcgccgacccgctcctccggcgacacctgctctccgccgccgcggcggcgggcggcgtggggcggaagcagcggcagcacccggcggcgacgctgcaggcgctgtcgctcgtgtcggacgcgctcgacaccgccgcgtccgcgccgccgtcgctgtcctccctccgcgccgccgagcggctgctgctgtcgctccccgtcgcgacccctttgtcgtgcctcctcctcgcgctcgcgtccgcctcgcgccgccgcggcggggcggcggcggcggcggcggccgcggtgctggacctcttcgcgctcgacccggcgctcgcgcggcacgagctcgcgccggcggccttcgaggcgctcttcgcgccgcgcctcctccccgtcatgcgccacttcgccgcgcgccgcgcgtccaccgccgccgccgcggcggaggcggcgtcccatcgcggcgaggacgggtccgtggagaccgccgcgatgtcggcgatgagggttctctccctgatgagcggcgcccaggcgcaggagatgagggacctggagcgcgagtacgagaaggtgctcgacgcgaactgcatagcgtacgcgctctacctaaagaagatccttgaaaccggcgacgcggcgaaggagacgtactccccgccgccaccgcctccagagctcgtattcggcgtcggagacgacgaccaggacggcgacgtcgacgacgagaccacggcggagaccgacgagaccgtcagctcgcagaacgacgtacggtacaacgtaatgctacgaacacaaacctatcccatcagcgtgctcggctcgacggtgtcgacaccatggtgacgtcatgttccggtgatcttttgcagccgatctgggcggacgccgacgaggcggccgacctgtacccgcggcagggcagcggcaaggggtggagggagctgatgcggccgccgagcctgtacccgcagcgcgtgccgccgcacctcatagtgcagcagcagcagtcgtcgccgtcgccgaccggcagaggaagcccggtggcgaggctgcgcgccgggcactcgccggcgacgccttcttccgacgtcagcatggaggactccccctcctcctccgagctcctcgccggcagagaggtcagtgctctgaattagtcttggtgcaactcgtttaatatgtaatctaggacgctaagaaagctaagattagcatcatatctcactccatttgttaattagagaagatgcaggcgatgttttcataaacaaatagagttgttttaaaatacaaagttgaacagatcatagctgaggtttcaatgttgctgtctcgtctcctaggaaaagcacacggcctcgccgctgtcacggcctgcaggcagagcgcgtccacgcggcgaggaagacgacgacgacgacgtcgccgccatgctctctccggagcacgcgaggtaagctagctggcgtcctcgcgctcgcctccaaagcaacaccgttcccgatgtgatgatggcgacgccgcggcggcggcggattattcttaatgcagttctgtgatgggcggcgacggcggcggcgacgtggcgcggcggccggtggtggcgacgcccaaggacttcgtgtgcccgatcacgagccaggtgttcgacgaccccgtcacgctcgagaccgggcagacgtacgagcgccgcgccatccaggagtggctcgaccgcggcaacgccacctgccccatcacgcgccaccgcctccacggcgcccacctccccagcaccaactacgtcctcaagcgcctcatcgccgcctggcgcgaccagaaccccgccgcctcctcctccgcgcccacgccgccgccgccggcgacgacgacgatggatagccccgccgccgcggccccgttcaagatcagctcgccgtcgccggacgccaccgtgagccaggccagcgcgccgtcgccgaccagcgtcatcgcgcaggcgtccctcgacagcgcagtcggcgagctccgcgccgcggtgtcctgcctctgcacgtcggaggagctcgccgactcggagaggtcggtgctccggatcgagcggctatggcgcgaggccgccggtgccgagcacgtcgtcctcgccgcgctcgccaagcccgccgtcgtcaacggcttcgtggagatcctcttcaactccgtgagcgcgcaggtgctccaggtggccgtcttcctcctcgccgagctcgcctcccgcgacgacgccgtcgtgcagacgctgacgagggtggactccgacgtggactgcctcgtcgcgctcttcaagaagggcctcgtcgaggccgtctcgctcatccacctcctctccccctcgccggagcagcttgtcgagatggacatggccgacgcgctggtcgccaccatccggcgaggcggcggcgacgacgacggcggcgcggtggtcaagatgtgcgtcaagccgaaggccgcgtcggtgatcctcctgagtcagatcctcgtcgaaggcggccgggacagctcgtcgccggcggtggccaagtccgccctggtctccgagaggttcatcaggagcgtggcggcgagcttggaagccgagcaggtggaggagagggtcgccgccgtgaggatcctactgcggtgcgtcgccgaggacggccattgccggagcagcatcgtcgagaactcggccctcgccgccgtcctcgacgcgttccacgtcgtcggcgacgccgacaagttcgacatcgtgcggctcctctccgaactgctcaagctcaaacggtaaccccaaagctcctccattttacggtccttaaaaaaaaaatctcgagtaccctactacttagaggcagggtttacaaaaccgtacgatcatcacacaattatcatgtgtgataacattctcagtttttaaatcacggtaaacctcgcggtaaccgtacagttacctcgataaccgccttttctgtggagtggtggtaaccacattcaaaacggtttgatgaacaccacctagaggtagtaaactttacattcaaaaatatatggtatcttcagatatcctcttaagaatgacaaaattatccacatctaaaacaaaatctcaacttatttttcaggcgatcagctgctgatcgtcttcttcggacgatcaaggaggcgagctccttcagcatgatgcacacgcttctcgtgtacctgcaatccacgacaccggagcagagccctgtcgttgcagggctacttcttcagctagatctcctagtaaaaacaactttttctcgcaacatttcttcagatttgtcaaaaaaaatctcatgtttgatggcgagatcaatgcgcaaatggtttgtcaggtggagccgaggaagatcagcatgtacagggaggaagcagtggacagcctcatccagtgcctcaagaactcggattacccgagaagccagctgctcgccgccgagactatcatgaatctctccggcaagttctcctcgtcgggccggccactctcacgctcatcgctgcttaagcttgccagggtgaaagagaggcaccggccgtcgcacgatctcagcatttctcgcggcgccggcgaggacgaaatggtagtattgggaaactattttggtcactaaaggggaatgtctcctcagttcgcttaaaaaccatcttatggttatgaaaaattctttaaaaaatttgaaaacactcatgcaacatgtctataaaattttaggtccaaactcaactcacacgtcgagatataaaaaaaaatacaaattcagtgtgaataatagtatattgtttacatgtgaatttgtctcttttttttcacgatgagcaggtcgaatttgaacttaatttttggtgaactgatagatatcaccgtactttacattgccaattttcagaagttttctctataaaaaaacctgctggatttcatacatcgagttcacttgcgatgtttttttttttttttgtaggaggaagagaaggcggcggcggagtgggagaggaaggcggcgtacgcgctggtcagccatgagttcgggctggtgttcgaggcgctgtcggggtgcctcgcggcggccaagaacggcgagctgttcacggcgagcctcgtgtcggcggcatggctggtccgcatgctccccctcctccccgacaccggcgtgctcggcgccgccagggtgtgcctgctccggcagctcgtgctcgtcctccggtcaggcaagcacggcagcgacagggccctcgccatggtggccctcaggagcttcatgaacgatcgcggttggtcacaccgtccattaccaatcttgccacaagaatttcagaagagagagagagagagagagagagagaactctgaattttttgttattttttggttcagaaagaaagaatctctgaacatttttatcctaacattgtgaaatttcagaggggatgcacgagatcacgacgtacatcaaggacgtgctcaggacgctcagggagctgaagaaatcgtccggcctcgcgttcgagatgctcaagctgctgtcagatggacaagaatccagcattgtaattgcatttttctcagctgttcttgcagcgaatctgaaattccggtttttactgaacatttctgttctttttgttccaggatatgtggaatcacaaggagctcaatcacgcagactgcagctcgaatggtgaggtcacatcgatcgcctacttcaagggctacatcttctccggccactctgatggaacactaaaggtttaattctctctttcaaaattccgaaatttttttcctgagatcataacattgtagtttcagttttagaaatctgtggaatttaaatgttcaggtctgggagggaagtgagaatatccttcgcctagtccatgaatcccaagaacacacgaaagcaatcaccagcttagcagtgctacactcagaggagaaactgttcagtggatcactggatagaactatcagagtatgtctaaattttcttggcaaaatcatgaaacaaaaaagatcgcacaaaatttcagaaatttaacatgttcatctctgctgaacacctgatcaccaggtgtggcagctccgagacgccctccggtgcgtcgaggtccacgacgccaaggacccggttcagagcctcgccgtcgccgccgccatggcctgcttcgcgccgcagggctccggcgtcaaggtgatcgatcgccgatcacatcatccggcgaggcgcttccatggatggccacctaacttggtctgtgttttgcaggtgctaagctggaacaatggtggcggcgccaaggtcctgaacgcgagcaaggtggtgagatccatggcgctggtgcacgggaagctcttctgcggctgcaacgacggcggcgtgcaggagatcgacctggcgagcgggacgatcggcgtgatccagcaagggagcaagaggatcatcggcaaggccagcccgatctactctctgcatcttcacggcgacctcctctacaccggcagcacctcgctcgacggcgcatcagtcaaggtaccaataaaaaagcaaaaatgaaaaactcggaaagcttgataaagttttgacagtttgaaacatgccaaagttcgaactcaaatcatataactctcaactgaaaatgtgtacttcatacaaaacagtcgactctatcatacaactttcaactctggaaacatttatgtgaagagtaattttaccatcctagaggtactatgttttcttctgtaaaatttgatacatctagatactaattatttcaaggtaccaaaatttttagtgtaaaatttaggtacctcaaggtactttttcaagaactttaaaattcctcttatctgaaagtacgtgctgagaacacaactgcgctaaatatagcaatttcgacttgaaactctccgaaaaaaaatgtcattcctatagaagaccaaaactatgaaatatgtcgaggctccgtttgaaacacagcaaagtttgacgaaatttcaatcagaactgaactgtaccctgtgaaattcatgcacacagtcgatgtattagtgtggtttctggtctaggcatgtggtgatgatgaaataggatgtgaattttgttctcttttttctgggtgcagatatggagcagctcgaactacagcctggtcgggacgataccgtcgtcggtggaggtgaggtcgctggtggtgagctcggacctggtgtacctcggctccaggaatggcgtcgtggagatctggtcgagggagaagctgaccaggatcggcgctctccaggccggcggcggcggcggcagcggccgggtccagtgcatggccgtcgacgccgacggcgatgtcatcgtcgtcgggacatcggacggcagaattcaggtttggaaaagaaaatgcatttttttttcttcttctgtttcttggttaaggaattgtagagagcagagctggttgagaatgatgagatttgtttgtggtactcacattgggcttgtcttggttttgcaggcttggggattgacttga</dnaseqindica> 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| External Link(s) |
