Os01g0231800

From RiceWiki
Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0231800| Description = Appr>p cyclic nucleotide phosphodiesterase domain containing protein| Version = NM_001049033.1 GI:115435479 GeneID:43...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0231800

Description

Appr>p cyclic nucleotide phosphodiesterase domain containing protein

Version

NM_001049033.1 GI:115435479 GeneID:4325893

Length

3941 bp

Definition

Oryza sativa Japonica Group Os01g0231800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7281031..7284971

Sequence Coding Region

7281444..7281552,7282469..7282584,7282663..7282728,7283137..7283227,7283514..7283581
,7284305..7284342,7284428..7284617

Expression

GEO Profiles:Os01g0231800

Genome Context

<gbrowseImage1> name=NC_008394:7281031..7284971 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7281031..7284971 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctagcttcactcacttcatctcgcttccgttgggtatccacccacaacttgttgataagctgaatgaattcaagaggtcaatcctgacttctaatgaatataaagctgcaggtttccgcatcgacgagtcaatatttgctattcccgaatcacttcacctaacggttcttatgttggagctaaagggtgagaacattgctaaggcttccagtgtgctccagtcagtatcggacaaactaatggaagccttgaaaaacagacctatctccatacagcttagaggtctggcatgcatgaaaggctcaccagataaggcctgggtagtatatgctcctgtgctggaagttggtgaacagggacgcctacaacaagtttgcgacattataattgatgcctttaccagctcaaacctagcacctacaagtgatgagaagcgagaactgaagttgcacgctaccgtgatgaatgcaaggttcaggaagggctactgtccggatgcttcatttgatgctcggaagatattcgaaaaatacgcggaacatgaatggggcgaatatctcattcccgagattcatctttgtcagacacgcaggtttgatgaaagtggacactactactgctgctcttcgcttcccttgcccgggaatatgcaagcggagcgagcctcggaataa</cdnaseq>

Protein Sequence

<aaseq>MSSFTHFISLPLGIHPQLVDKLNEFKRSILTSNEYKAAGFRIDE SIFAIPESLHLTVLMLELKGENIAKASSVLQSVSDKLMEALKNRPISIQLRGLACMKG SPDKAWVVYAPVLEVGEQGRLQQVCDIIIDAFTSSNLAPTSDEKRELKLHATVMNARF RKGYCPDASFDARKIFEKYAEHEWGEYLIPEIHLCQTRRFDESGHYYCCSSLPLPGNM QAERASE</aaseq>

Gene Sequence

<dnaseqindica>414..522#1439..1554#1633..1698#2107..2197#2484..2551#3275..3312#3398..3587#gcaaccagtaaaaatccaatcttttcctcctccgtaggtgctcccccccctctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacacacgcacgcacgcacgcacagaccaatttctgattcattgtcgtcttgctaggtttagcctggcagctgtttgatccagagtttgtcagttgggagctagtggtggtgggatttttctttttttttttgtttttatggattttgttgggaaaagattatgtttggggttacatgttataagctgattgaatcaactatgttatcatgttaaaaatgctagttatgtcagctaatcatgattatcattctggaccgatgaactcattctttgtttcaggctgttgacagtccaatgtctagcttcactcacttcatctcgcttccgttgggtatccacccacaacttgttgataagctgaatgaattcaagaggtcaatcctgacttctaatgaatataaaggtaaggatagggacctaagtgaagttctatacttctatagttctatggatgaaatgtactattaacacaagcaattagaaaggcctagtgtttcaatagaatgcaagttcaagcataggagtctgtcagagtaaaagaggataataagggcttctgccctggtctaaaatctttgctgattttgcaagtgctttatgttccattttggatcccccccccccccccccggatttctggcaactctagaaagtccacttttggaacttcctagtgttgtgtctgtgtcaataattgcatttttatataagtactccacagcccacacatgtgtaggttgtttgatgagggaacacacgaccgttttaggctaaatagaaataatagtaaagaagtttatatgcatatggatttttgtaaataccctccaactccaattgcgtgaacaaagcataacagagaaatttgaagatggccatgttctcatttctttcagtacaaatcaactaactagggtatgtttatgaagaaagcaagatgcgcagctttagtttaagttgtcaattcgacagttttgtatctgaagttctgttcttattcgtaacataccacactgttgattttggaaatgatagattctactgaattgctgatgtgagataactgcaccagtagcttgctatttaataatgaaaataataaggtgagctagtggaaattattgaagtttggtgggtcaggaaaaaagaaaagaaactcttgtttgcagaacaaatcttgtatctgtatttcggtttctacatttttgttgtatacctgtggcatcttggcagtactaaatgcattgcttgttataccatttccacattacaaattctacactcttcagcattgaactaagtttttttatcacttgcagctgcaggtttccgcatcgacgagtcaatatttgctattcccgaatcacttcacctaacggttcttatgttggagctaaagggtgagaacattgctaaggcttccagtgtgctccaggtatttttcattttaggattattatgttattgcctgagacgacagtaaggaacttaatgcgttacctggtggatgcagtcagtatcggacaaactaatggaagccttgaaaaacagacctatctccatacagcttagaggtctggtaagttgccattcttgaacagttttggctgtaagctcatttgggcgtatacatttggaagaacaaatatagatattcgaggcagagaacaaaggatttgttcctgaacactttgctcaccatagtttgttctgagaaacgtccagtggtcttctgactagctccacaagatggtgggctagccaacctgggttcgaagcctcaccccttctaattatttgatattaggtcatttcctaatattcgtgtttttttttctcaccatagtctgtaatctcctttgataaagatgctattgctgtgaagcacattttaattaatactagtacctattcataaaaggtatatgcaccttttatcccactttttccaatgattcaaagttccaacgagaatatttcattccaggcatgcatgaaaggctcaccagataaggcctgggtagtatatgctcctgtgctggaagttggtgaacagggacgcctacaacaagtttgcggtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaactcatgttttcaatacaatcttaattacaaagtcgcacctgtacagtttgagatgtcttactgatggaacatgttttttaggtggtagaggccctcataaatcatgtattcaacatgtgagccatcgcttaacatacagcccacatgaaaagcttgcatttattgcacttgtagttgataaattccaatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagacattataattgatgcctttaccagctcaaacctagcacctacaagtgatgagaagcgagaactgaaggttagtaaatactgcctccaaccaaaaatgtatgacgttggttagtatatttttaactaaccaacatcatacaaaaagaaacggatggagtatatatatatatatatatatatatatatatatatatatatatatatatataagcatttctctctttcgtttccatgacatcaacatgtactccctccgtttctaaatatttgacgccgttgatttttttaaatatgtttgatcgttcatcttattcaaaaaaattaagtaattattaattctttttctatcatttgattccttgttaaatatacttatatgtatacatatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttagaaacagaaggaatagtttttctctgaagctaatagttgttctgaaagctgtattgtctaccaaaatcatattgaaatggcagataacatcttattgtcaataaaactgtagtctagttcgactattggatgagtctagaatgcacattttgcacaatattgttatgttatattttatttccaaaaaaactttgttactaacttaagtacttccattattgttcttgattttccttttgtggttgtttggcgaaatattaagcattttactgaaacagcaacatttgacgctaaaattgccatcctcttctcaaactgcagttgcacgctaccgtgatgaatgcaaggttcaggaaggggtaacacagtaaatcttctctctgcatctttataattcatcgtctatgtaccacgagcttaccttgactaccttgttctctgcagctactgtccggatgcttcatttgatgctcggaagatattcgaaaaatacgcggaacatgaatggggcgaatatctcattcccgagattcatctttgtcagacacgcaggtttgatgaaagtggacactactactgctgctcttcgcttcccttgcccgggaatatgcaagcggagcgagcctcggaataaccatttcatcccccaaggatgaaactgcggtttactattactgaaccaataatgtgccattgttggtgtggcattcttgagtgagtgagttcatataggtcttttcttttgatagtggaataagcagccatgcataatcctgtgtggcaactcttcggttttttttccttcttaatatgaagcaggagctacctgcactcctttatgaggtttagtacctcaaaaataatcctgtatggtgttgtaaacctgttgttggtctggaccttgtacaatcacactactgcaagtttatttctctgttgtttttactaatatatcttcagtttgaactcatcaatcatcttagctccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0231800, RefSeq:Os01g0231800