Os01g0234850

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0234850| Description = The start codon is not identified.| Version = NM_001185318.1 GI:297719770 GeneID:9266535| Length = 3495 bp| Definit...")
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Gene Name

Os01g0234850

Description

The start codon is not identified.

Version

NM_001185318.1 GI:297719770 GeneID:9266535

Length

3495 bp

Definition

Oryza sativa Japonica Group Os01g0234850, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7442682..7446176

Sequence Coding Region

7442887..7443264,7443777..7445089,7446048..7446126

Expression

GEO Profiles:Os01g0234850

Genome Context

<gbrowseImage1> name=NC_008394:7442682..7446176 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7442682..7446176 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttattctccatcaagaggttgaaggctaaactactcttagttcaatgtttaactaaacatatccatacccatcactttggcattgcagtgagcccaagcaacaacgatgctttggacctagctgttgcacaattagatggtgatcaatcttcatatcatcatacaccagaggtcttcttactctaccttgcagttcccggtgttcctctagccaaaatgcaagtacttgagtctgattcggttgccgcagtgaagcttcggatccaaaacagcaaaggatttgtggcgagaaaccaaaggttggttttcgaaggcagagagctctctcgcaatgatagccatatccgtgactatggggtgaggtatggaagtgtgcttcatctcgtgatccgactatcagatccacgacgaaccgctgtgaggactgtttatggaaggaagtttaaattccaagtggaccaacgtcgaaatgctagatatatgaagcaagagatttcaagaaatgttgaaagtcccaatggtattggagagagcatgactttggtcaatggtgaaaagcttgatgaaagcacattaatctccaccatttgtgagaccaacacttctgataccgattttcttgcaaacaagtcagaaaattttaatggaaatgaaatagaagaatcttttgagcaattatccatttcttctgacattggaaacaatttacaatttgatgatgccaaggagaaatatcccctgattgaaccagttcttgtcaacccaagtgttacccttactccaaaaattacgggtatgatcgaagctacacttgctgggctagaaatggagcacacacctgtgatgtcctcagagggcactgggggagtctacttcatgctagattcatcaggccaagagtatgttgctgttttcaagccaataaatgaagagccaatggcaaaggacaatcctaatggctaccctttgtccagtgatggggaaggattaaagagaggaacaagagtcggtgaaggtgcattcagggaggttgcagcatacattcttgaccatcctattagtggttatcgcgtgagcgatgaactagggtttgctggtgttcctccgacagttcttgttcgatgtttgaatggttatgttgatcagactaagtatgattgcgcggagaaagaaccgaaaattgggtccttgcaaatgtttgtgaagaattctgggagttgtgaggagtttggtcctagggctttccctgtgcaagaggtgcacaagattgctgttttggatatgaggctagctaacacggatcgccatggcggcaacatactgattcgtaaggatgagaatgggcagattgagctgataccaattgatcatgggtattgtctgcctgaaagctttgaagactgcacatttgattggctttactggccccaagcacgccagcctttcaatgttgaaaccctggactacataaagtcacttgacgaggaagaggatatcaagttgctcaagctcaatggttgtgaaccatcatctaagtgtgttcgtgtttttcgtctaagcaccatgatgttgaagaagggtgctgtgagaggtctaactccatatgagatcggtaacatgttgtgtagggagaacattacaaccaaatcaaagattgaagagattgttgaagaggcagagcatgttgttcttcctgggataggtgaaaaggcattcatggaagccatctcaggtatcatggatcgctatctcaatgaactcttcaaatga</cdnaseq>

Protein Sequence

<aaseq>LFSIKRLKAKLLLVQCLTKHIHTHHFGIAVSPSNNDALDLAVAQ LDGDQSSYHHTPEVFLLYLAVPGVPLAKMQVLESDSVAAVKLRIQNSKGFVARNQRLV FEGRELSRNDSHIRDYGVRYGSVLHLVIRLSDPRRTAVRTVYGRKFKFQVDQRRNARY MKQEISRNVESPNGIGESMTLVNGEKLDESTLISTICETNTSDTDFLANKSENFNGNE IEESFEQLSISSDIGNNLQFDDAKEKYPLIEPVLVNPSVTLTPKITGMIEATLAGLEM EHTPVMSSEGTGGVYFMLDSSGQEYVAVFKPINEEPMAKDNPNGYPLSSDGEGLKRGT RVGEGAFREVAAYILDHPISGYRVSDELGFAGVPPTVLVRCLNGYVDQTKYDCAEKEP KIGSLQMFVKNSGSCEEFGPRAFPVQEVHKIAVLDMRLANTDRHGGNILIRKDENGQI ELIPIDHGYCLPESFEDCTFDWLYWPQARQPFNVETLDYIKSLDEEEDIKLLKLNGCE PSSKCVRVFRLSTMMLKKGAVRGLTPYEIGNMLCRENITTKSKIEEIVEEAEHVVLPG IGEKAFMEAISGIMDRYLNELFK</aaseq>

Gene Sequence

<dnaseqindica>2913..3290#1088..2400#51..129#attgccctctctcagctcccaaaaatctcactcatgtttgattgctttagttattctccatcaagaggttgaaggctaaactactcttagttcaatgtttaactaaacatatccatacccatcactttggtaagtatcatttatgtgccacactatatatgtatatgcacgtcatttattttattggccacttttctagaaatcttaacccccttttcttacaaattcatgtgttgatgggtatattctgtggatttttattattatttggcatttattatggaggatggattcgaaggtaacatgtagagtaaaatacattgttggtccttaaagttgttgtgtgatgtcatactagtccctaaactttgaaactttgaagatggagtttgagaggaggggggggggagagagagagagagagagagagagagagagagagagagagagatggtaaccacaccagtatccgaaggagtatttggtattttaataagattaggatgtgtacttttttctcaaagttaagggatcaacatggcaccatgcaacaagtttagggagcacttctagtgtattttaatctttacttaaatgtgggaaaattatgtcttttaagtacactgtaggtcttgtgggagctacttttatggatgtgcctttttgtgtggcaacactatgttcaatttatttaggatattgtgcttatgtagtgtgattaaaatgatcaaatcaaaattgtgattgatgtcctaacacatactcctttgtcccaaaaaaaccccccaatcctagggatgtatctggacaacgtgtatgtctagatatatatctaggattggatttttttttttggacggatggagtactactttaattaatttcacaataactatatttggaattcgaaatgcaaagttcctttatctatgttcttacaactatttctcttcatgtacttgatttctggagatggcttccaagatattgtaattaaaaacacatccctcacagcttccatagacgctactaaagtttgtggtgcatatcaaagaaactattgttgacaagagcatggcatcaacaggcattgcagtgagcccaagcaacaacgatgctttggacctagctgttgcacaattagatggtgatcaatcttcatatcatcatacaccagaggtcttcttactctaccttgcagttcccggtgttcctctagccaaaatgcaagtacttgagtctgattcggttgccgcagtgaagcttcggatccaaaacagcaaaggatttgtggcgagaaaccaaaggttggttttcgaaggcagagagctctctcgcaatgatagccatatccgtgactatggggtgaggtatggaagtgtgcttcatctcgtgatccgactatcagatccacgacgaaccgctgtgaggactgtttatggaaggaagtttaaattccaagtggaccaacgtcgaaatgctagatatatgaagcaagagatttcaagaaatgttgaaagtcccaatggtattggagagagcatgactttggtcaatggtgaaaagcttgatgaaagcacattaatctccaccatttgtgagaccaacacttctgataccgattttcttgcaaacaagtcagaaaattttaatggaaatgaaatagaagaatcttttgagcaattatccatttcttctgacattggaaacaatttacaatttgatgatgccaaggagaaatatcccctgattgaaccagttcttgtcaacccaagtgttacccttactccaaaaattacgggtatgatcgaagctacacttgctgggctagaaatggagcacacacctgtgatgtcctcagagggcactgggggagtctacttcatgctagattcatcaggccaagagtatgttgctgttttcaagccaataaatgaagagccaatggcaaaggacaatcctaatggctaccctttgtccagtgatggggaaggattaaagagaggaacaagagtcggtgaaggtgcattcagggaggttgcagcatacattcttgaccatcctattagtggttatcgcgtgagcgatgaactagggtttgctggtgttcctccgacagttcttgttcgatgtttgaatggttatgttgatcagactaagtatgattgcgcggagaaagaaccgaaaattgggtccttgcaaatgtttgtgaagaattctgggagttgtgaggagtttggtcctagggctttccctgtgcaagaggtgcacaagattgctgttttggatatgaggctagctaacacggatcgccatggcggcaacatactgattcgtaaggatgagaatgggcagattgagctgataccaattgatcatgggtattgtctgcctgaaagcgtaagtattttgttttgctttgaactgcattttttgtactgaaaattgaaatctatgatcacccatagtcactaatcgccataaagagttgctcactccatgtcaaaaatataagctgtataagtttcttacactgtcttcagtgcaaaactttgacctttaattccttgtatagtattaatatcaataactataaaattgacataacgtgaatgtactttcaaattcaaatcttatgatgccacatgcttgacgctaaacatatgtaccgctagttcaattattagtcaatgtttgcaaatgttggcttcctaaaattgcgggaggcttatatttcaggatagagggagtaattttcacgaccacacactatgtacacattttaatataatatccattgctaaattttttgtcctaatttggttactagcaatgattgttttctcatgttgtaaacaatgtttgaactattttagttttagtaattgatttgacttctaaacaatttatagtttgaagactgcacatttgattggctttactggccccaagcacgccagcctttcaatgttgaaaccctggactacataaagtcacttgacgaggaagaggatatcaagttgctcaagctcaatggttgtgaaccatcatctaagtgtgttcgtgtttttcgtctaagcaccatgatgttgaagaagggtgctgtgagaggtctaactccatatgagatcggtaacatgttgtgtagggagaacattacaaccaaatcaaagattgaagagattgttgaagaggcagagcatgttgttcttcctgggataggtgaaaaggcattcatggaagccatctcaggtatcatggatcgctatctcaatgaactcttcaaatgaaatgctcctcaagatgactgtgaattatggtttcgagtgtgtgtgataagtgaatttgtaagtaatgtaagtctcttttgtgtcaagatatcgcctccatgaataataaggaaggatcattggtccttcttacatttctcgatgtaaattgtaaatgaatataagtgaagaatgttgtaaattaatggattgtgtatatctcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0234850, RefSeq:Os01g0234850