Os10g0475000

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0475000| Description = Conserved hypothetical protein| Version = NM_001189277.1 GI:297727684 GeneID:9268983| Length = 3928 bp| Definition ...")
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Gene Name

Os10g0475000

Description

Conserved hypothetical protein

Version

NM_001189277.1 GI:297727684 GeneID:9268983

Length

3928 bp

Definition

Oryza sativa Japonica Group Os10g0475000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18141880..18145807

Sequence Coding Region

18143220..18143921

Expression

GEO Profiles:Os10g0475000

Genome Context

<gbrowseImage1> name=NC_008403:18141880..18145807 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18141880..18145807 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtaactagggtcgggtttgtaagggcattcacagtccgcgtgcgcggcattcggccaacccgtggcaaacccaagattccttgccaacttggcttgcagcgtgaccaaaagagcttcgtagccaaaattggacacacgaacctcatcagaaaagctgccatcgacgcggggaagaacgacgcggccgcactgtgcgggtcgtggcctcacgcttcgtggccccgtgcgacgctggagagagctcctcgtcggagagggaacctcgttgctcgtcgttctcctctccgccgcgggcctaccatggagctgtcgtcgagccgccgccaccttccccattgccgcctcggcagtccagatccgacgagccatgggctggatctggagagctcggtggagagagaggccggaggcggggaggggacgccggagggacaggccggaggcggggaggggacgccggagggggaagagccgacgccgcgcatgtcctcaatccggagctcgtcgtcgattcggagccggcgccgtcggtgctcgggacgcgccgccgcccggcgccgttggcactcgagcggcccctacacccaccgccgttgccgcgcgagccgccccgccgtcgccgtgcgggccgccccgcggccgtcgtcgcgcgggccgcttcgccgccgtcgtcgcgtgggccaccccgctgccgcctga</cdnaseq>

Protein Sequence

<aaseq>MVTRVGFVRAFTVRVRGIRPTRGKPKIPCQLGLQRDQKSFVAKI GHTNLIRKAAIDAGKNDAAALCGSWPHASWPRATLERAPRRRGNLVARRSPLRRGPTM ELSSSRRHLPHCRLGSPDPTSHGLDLESSVEREAGGGEGTPEGQAGGGEGTPEGEEPT PRMSSIRSSSSIRSRRRRCSGRAAARRRWHSSGPYTHRRCRASRPAVAVRAAPRPSSR GPLRRRRRVGHPAAA</aaseq>

Gene Sequence

<dnaseqindica>1887..2588#gtacgtacgtctcctcttcctcctcctcctcctcctctcgaccgactcacgaatcagaatcaccatgcagcagcacggcatcacataccccgtgcttttcaaatttcaaccacataaaaatctgacaaatctaaaattctgtaagaaatcgatcaattatcgtcaaaatttagcagagatcgaatttccatacaagtatacaacagtcctacaccgaagcacgcaggtgcaccatgttaacaaacaacagcagggtttttaatttcgaaattggattttttggcaaggggggactggaattactgaaatttcggaaatatcagtaatttcgttttttttgccaaaattatttgaaattttgactattttgaatgaatttgaataaaatttgatcaaattcacaaaaagttgcaaaaaaccaaaaatttcggacgagatttgagcatgctggtggggggtgaaatcaccaaaatttcaaaccctgaacaacagtacaaacaccagccagtcactcgcagcagctgcaccgtagacttcttgttcttggagctacctaggaaccggtttagagaattttttatttataattcgtctgttttcagcatatgcgtattctgcatttgttcaaattcagatactcgtatcagcctaaatctccgtttgaatccaattaagatgtatacaatcgagtaacgtcccctccaattaagatacatattttcttcgggctctagaaaatttacattccacggtcccaacctggatggattggattacattccagtgggcactggcaacatgactggtgaggctgtaaaaacagcactgaatggctgtttggtcctactgcgtactgctacttggtcgtgtgtatatatggtgcaaaaaatgccgtacttactgcctattcagaggattagatggttggaattaatatgacagctcagtcactgagaatggacctgcatcagcaggagtgaagaaaacatcctcatgcgccaagaattcacacatgacacaactctcacacaaatttagtaagagatatctctcttggtccggttcaaaccttaggctgaatttgaaagtttggttgaaattggtgcaatgcgatagaaaagttgtgtgtgtgaaaggtttgatgtgatgaaaagctggaagtttgaaaaaaaaattggaactaaacaaggccttattgagatagttagcatataaaaaatgagaaaaccattagcacataattaattaattttaattgttacaaacttaaaatatagttttatttaatattttaaagcaacttatatgtactagtgaaaaccaaaataaaatcaatattttaattagaaaccatctgctgtttgttgccactgcagggctaaggtgcgaaatttgtttgattttctaccactaaaactcacactcgttccatgcttatctgttaatagaagagattttccagctgtactctatcatctgactctcacagcctcacaggcgacgatcactgggttgtctgcaaactaattaagcctctgttgtcgccaaaaactgattaaggaggcgtttcttgtcatcttgtgtatagtataggacagtggttggggatttgtgaatcgactgaacatttgggtggttagactttcagacaatcgcaaattcacgggtaggacatggctgtctttctgtcaatcacccgcgtccaggttttgagctgcttttgcttcaaaaatgtgcgaaatcaaagtcgatcttgtcgtggtggtgactaggttcattaggaaaacctgaaacgtcttctgcttttgtgaaagcacctctgcccccccagttcaatcaactcaaacagggtactactggtactagtgatgtgatcttctaacgtgatggtaactagggtcgggtttgtaagggcattcacagtccgcgtgcgcggcattcggccaacccgtggcaaacccaagattccttgccaacttggcttgcagcgtgaccaaaagagcttcgtagccaaaattggacacacgaacctcatcagaaaagctgccatcgacgcggggaagaacgacgcggccgcactgtgcgggtcgtggcctcacgcttcgtggccccgtgcgacgctggagagagctcctcgtcggagagggaacctcgttgctcgtcgttctcctctccgccgcgggcctaccatggagctgtcgtcgagccgccgccaccttccccattgccgcctcggcagtccagatccgacgagccatgggctggatctggagagctcggtggagagagaggccggaggcggggaggggacgccggagggacaggccggaggcggggaggggacgccggagggggaagagccgacgccgcgcatgtcctcaatccggagctcgtcgtcgattcggagccggcgccgtcggtgctcgggacgcgccgccgcccggcgccgttggcactcgagcggcccctacacccaccgccgttgccgcgcgagccgccccgccgtcgccgtgcgggccgccccgcggccgtcgtcgcgcgggccgcttcgccgccgtcgtcgcgtgggccaccccgctgccgcctgacgccgctcggtcccggtcggtctcagaagagatgagattgtgagaagtcgagaagtgagaggaaggagagagaaaggcagttgaaaagtgagagaagaacactggtgggacccacaataaagtaggatgtgctgtggagcaagtggctagtatgcttctttggtgtgtttgggtctacgtggcaaggggaggcgcgacaaatttgtgtggcgcaccgtgaatgtcctaaggactctttttgaaacgcatgattatgaaaatacaagaatgagaaaatcagaggaatatgatgtcatgctacaacgaatcttataaatcctaccgaaaatacattcataggattttacaaaaaagtattgtttgctagcaccattgaaaaatcaatggaactttggtggtgtcttttcttctgaacatgaaagattaagttttttttacataaaacgatatgatattaacgtatgattgattaagttttaattattacaaactttaaaaaatagattaatatgatattttagagcagctttcatataaaaagttttcgtacgaaatgcaccatttagcagtttgaaaaatgtgccacgaaaatcttaatgttaatccaactcttgacggaaaaaagaacgggccctttatgtcacaaggatgagggacctgatgttagttttcctctaaaattcctatgagcaattccgaatttcaaaggattttagcgaagcaaatttgtatattccaaaggaccatctaggaaaacaagttcaatggatttgaatcacccaaaatttctttacttttcctttgttccaacttccaacggagcccttatcttattgtttgagatgaagataataatacagagcaattttaagttttgaagatgattcttttgaaaattatattttgtgaatatttttagtttttatcattaacaatcataaaaggagagttaagtaatgatagtggcaaaaactctgaaattgatcaaatataaaattctgaaattcaaaatcagctcctgattatagtccgtagcattgccaaacatggttgaaagtgcaagcatggtaatttgtgtgattaaacaaatttacacactacgttagtactctctccatttcacattataagtcgtcttgtaggagtactaactactccctccgtcccaaaatataagaacttaaagaccataagggatattaggaacttaaagaccggaaatgtcccatccggttctagattcttatattttgagacggagagaataatatcttataatgtgaaacagagaaaatacttcttccttaatgaaacaactgtgcaaactctaaattaataac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0475000, RefSeq:Os10g0475000