Os01g0239100

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0239100| Description = Heat shock protein DnaJ family protein| Version = NM_001049078.1 GI:115435569 GeneID:4326364| Length = 4618 bp| Def...")
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Gene Name

Os01g0239100

Description

Heat shock protein DnaJ family protein

Version

NM_001049078.1 GI:115435569 GeneID:4326364

Length

4618 bp

Definition

Oryza sativa Japonica Group Os01g0239100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7711614..7716231

Sequence Coding Region

7711614..7711781,7712721..7713163,7715793..7716231

Expression

GEO Profiles:Os01g0239100

Genome Context

<gbrowseImage1> name=NC_008394:7711614..7716231 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7711614..7716231 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtcgactactacaaggtcctcggcgtcgaccgcggcgccggggacgacgacctcaagaaggcctaccacaagctcgccatgcggtggcaccccgacaagaaccccaccaacaacaagaaggaggccgaggccaagttcaagcagatctccgaggcctacgaggtccttagtgatccccagaaacgcacaatctatgatcaggtaggggaagaagggctcaaggggcagccgccccctggtgcgggaggtcctggagcatctcccttctaccctggtggtgcccattccaactcttttcacttcaacccaaggagtgcagacgacatttttgccgagttctttggattccgtggtcctttctctagcatgggtggcatgccaagtgtaagtggaggcatgagaggggacccaaggttcccagggtttggcaatgaatatttctcttcacgctttggtggtgagggttccaccagtatgcatcagccgtcacaccaactagcgaaacctccgcccattgagaaccggcttccagtcagccttgcagatctgtacaagggtgtaacaaaaaagatgaagatctcaagagagattatagacttcaacgggagagtttcacagcaggaggaaattttgcagatagaagtaaagccaggttggaagagggggacaaagatcacttttgaagagaaggggaatcaagctccaaacatgaaacctgctgatattgttttcataattgaggagaagccccatgacattttcaccagggagggaaatgatcttgttataacggagaaaatatctttggtggaagcgcttactgggtatactgcacgtatcattacacttgatgcgcgaagtctgtcagtgcccattaattcagtcatccatcctgactatgtggaggtggtccctggagaaggcatgcctaatccaaaagggcccaataagaagggagatctgaagattaaattcaacatcaggttcccttccaggttgacatctgatcaaaaagcagggttcaaaaggctcttgggttcttga</cdnaseq>

Protein Sequence

<aaseq>MGVDYYKVLGVDRGAGDDDLKKAYHKLAMRWHPDKNPTNNKKEA EAKFKQISEAYEVLSDPQKRTIYDQVGEEGLKGQPPPGAGGPGASPFYPGGAHSNSFH FNPRSADDIFAEFFGFRGPFSSMGGMPSVSGGMRGDPRFPGFGNEYFSSRFGGEGSTS MHQPSHQLAKPPPIENRLPVSLADLYKGVTKKMKISREIIDFNGRVSQQEEILQIEVK PGWKRGTKITFEEKGNQAPNMKPADIVFIIEEKPHDIFTREGNDLVITEKISLVEALT GYTARIITLDARSLSVPINSVIHPDYVEVVPGEGMPNPKGPNKKGDLKIKFNIRFPSR LTSDQKAGFKRLLGS</aaseq>

Gene Sequence

<dnaseqindica>1..168#1108..1550#4180..4618#atgggggtcgactactacaaggtcctcggcgtcgaccgcggcgccggggacgacgacctcaagaaggcctaccacaagctcgccatgcggtggcaccccgacaagaaccccaccaacaacaagaaggaggccgaggccaagttcaagcagatctccgaggcctacgaggttgccctcacaccccccgcatctccccctcctcatattcctgcgaagattagtttttcgtggttcattgtagcggctcgatccgttatctcggcggtttgaagaatgatgttctttctttgcggaagaagtaatcaaggccattggaaacctacatcatcatcaatcttacaaagatcatattttgattcctccaggcaaatctagggtattaatatatctgacacgatcatacctcgtattggttgttacccttagtccgtatggaggggaagaatttctttgtcatgttattcgtgttggaatcgttctagcttcaatgtttactgcgatttagcgggcgctctaaagtttttcttatgtctaaataaggaatagaggcgaaccgaccttatttggcgcgctaaatttttcgatgagtaaatagcgaatactatatcccttttacaatacttagattatggccttgttcggccatcatttttgtagatgtggctaccgccagtagccacgtgtgcggggccgcagccagaaccactaggcgaagcggcagctgcatccgcaaaaatcgcagccaagcagagcctatggtgctaagggcatgtcatatactcatatcataatttatgttatacattctgaatgattctttatccacgttcgaaggtattggtatgaggctaatgctaggtacacaattatttcaagtaaagtaaaaaagatctgctgatccaaaatgtaacccagccattcggtatctttcattttccagaatacacattgttgagttgcgattctcattccatggttggtattttcttttagtgcaatataacagcttagtttatttcaatccagtccttgcagtgattgaaaattatccgtccgttgttgatattttttgatctgttattaatgctatttttttttaccttttaggtccttagtgatccccagaaacgcacaatctatgatcaggtaggggaagaagggctcaaggggcagccgccccctggtgcgggaggtcctggagcatctcccttctaccctggtggtgcccattccaactcttttcacttcaacccaaggagtgcagacgacatttttgccgagttctttggattccgtggtcctttctctagcatgggtggcatgccaagtgtaagtggaggcatgagaggggacccaaggttcccagggtttggcaatgaatatttctcttcacgctttggtggtgagggttccaccagtatgcatcagccgtcacaccaactagcgaaacctccgcccattgagaaccggcttccagtcagccttgcagatctgtacaagggtgtaacaaaaaagatgaagatctcaagagagattatagacttcaacgggtaagcctccattacttttcgatgactttaaaacttagtactaaacaacttgcctatacaattttgttttgtatggtcaaacttcttccagagtgaactggtagcactataagtttcgtaggagcaagattgtttactcatgtttgccaatcacgtattcattatttcattgttgttgcaatggattacttcgttgctattgagctactataaatggctacattaactttcatagataagaatcacctactaatcaatatatccttattttgggaaaaatgaaagcttatcgttcctggaaaatatcctgcttctatcgtgcataatggtgtgttttccttggtttaacacttgatgtgacaatcaagtagtttagattttggagcttaatactgtttgctgatcatattgtagtttgtaagccttggagcattgccatgatatttgtggtaacatgtcagagatttgaagctgtatcgggcattctatcacattgacatcattttacattttttttaaaatgaagaaggaaatttactaggcagttctctgttgggaacatgatctccttatatatggagaattgtccaggtttcatcatataatttctattgtactagaacttgtatagaaaatgcaacaacagcatgcagtgttcaagtttactgatatgtgaggctcatgatagcacatcacatcctgacccctaaacgaccttgatattgtcctctcccagtctcccttttaatacgtcttcctttcttgattcgccttccttgatcttatctgcgttcgccaagtattgttgattacttggtagctcacatctgcaagctggctcgattagacatttgcatagggtgacaagaacctgcaacccgaaaatgtataagttgatggcttgcaaacagggatctcatgttcaacagttctaagctattgcactttaggtttggattttggaagcattgaggatttgaggcctcatttgcaacaactccaaattcctggcacatacgcgtgtttggaattttggaatcaatggccaaattcctggcacatacacgtgcaagggaatggatttggatccatccaaacaaggtcgaaagggtcatattagtgtacgaaactttgaggcattcctatgaaagcacttaatccaaacaaggtcgaaagggtcatattagtgtacgaaacactgaggcattcctatgaaagcacttaaggccctgtttctttcagcttgggattattataatctagattattgagtcagattactataagctagattgttataatctgtagtagaataagcggttagttgtttctttcctagattattaaagcctagattattgggtttgcaagtctaaagagggagtggggtggcatggtgggtaatttttcacccaataatctggaaaaagctcacctaaatgagcttatcagattataataagctgggctccagattataataagctacttcaataagttatttgtttctttcagcttactcccaataatctggattataataatcccaagttgaaagatacagggcctaagttgaacatcctagttgcctcttctgccacacctttaagaggtctacttgcattcctattttttttggtaccatcacaaaaaatctcagagttgaaaaataccattgtatatatcattgacatgtgccacatacgatggtattttccaattcgtgtatctccatgatggtattttttaaattttctcattattctagtgtcaagtatagtggttcttcgtcctataaaattagcttttatgtcattgagatgggaatgatccatgatcattaaggaacaaaaacacaaccagttttaccatgcgatgtttgtgcataaacctgtaaatagcaatgacacatcatttgtgacatatactgttgtaactacacagactgcagttccgtatttccttttttagtacacctttatcatctttaccttcttaacactttctagtgatgtccaaatagtctggccattgctaataagtaaatttattaaacaattatatcagagcgcaaagcaccaagttggcaacctctagattcatgctagcgtaaaggctgtcctattttgtgtagccaatcaatgtaactcatatttttgctaagcattgttgacgtgatgttttactggatacagagacatgaacaaattagtgacattaaaaggaattgttacttgagatttacgtgcgaaaaaaattttagttgtcttcttatggctgtgacgtggctttgaaaaggtgtttctgacatattgggttatcctgtaattagtttataaatttgtgaagtgtaataattccttttagctctgctttccaaagcacagaagtgcagcaaaactaagcatttaaaactacattcccttttgattttctgctacatgattagctgatattgtttccccctgttgtttacgacacatgttttcaattttcagggggtgatattcctacttttcattttattcttcagtgaaactgattttacataacatctttgacttctttatgggtaccttatgttaattatttgtacttgtctgcatgctaatttcactatttgtaacaggagagtttcacagcaggaggaaattttgcagatagaagtaaagccaggttggaagagggggacaaagatcacttttgaagagaaggggaatcaagctccaaacatgaaacctgctgatattgttttcataattgaggagaagccccatgacattttcaccagggagggaaatgatcttgttataacggagaaaatatctttggtggaagcgcttactgggtatactgcacgtatcattacacttgatgcgcgaagtctgtcagtgcccattaattcagtcatccatcctgactatgtggaggtggtccctggagaaggcatgcctaatccaaaagggcccaataagaagggagatctgaagattaaattcaacatcaggttcccttccaggttgacatctgatcaaaaagcagggttcaaaaggctcttgggttcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0239100, RefSeq:Os01g0239100