Os01g0240700

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0240700| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001049083.2 GI:297596417 GeneID:4326371| ...")
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Gene Name

Os01g0240700

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001049083.2 GI:297596417 GeneID:4326371

Length

4312 bp

Definition

Oryza sativa Japonica Group Os01g0240700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7775025..7779336

Sequence Coding Region

7775025..7776168,7779218..7779336

Expression

GEO Profiles:Os01g0240700

Genome Context

<gbrowseImage1> name=NC_008394:7775025..7779336 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7775025..7779336 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctccgtcgtgggtgatcctgagctgcgagccgcgggtgtgcggcggcggcgacgaccccgtcctgccgcagggagccgacgtcgccctctccctcgccgcgccgccgcgcgtcgcggtgctctcggtgtcccggcgcgtctcgccggccgaggtggacccctgcgccaggtgcaagtcccccttcgtcctcgcgctcgacccctccgcggggctcgtcctcctcgtcgcgccgccgccaccgtcccccgacgactccggcgacctgcggtcctggaccgaccgcgacggcaacgagcgcacgttccgcgtcagcctcatcccgcgcccgctctacttcgtctgcgacgtcgccgccgccaccgcctcccacgtccccgacccggagcgcctcatcttcaacaacgacctcggtgtcatcgccgcgccaggaggaggccgggggaactacatggtcgtcgagctccagaccatcgtcggcgatgacgaggccaccctgctctgcttctcgtccgtgaccggcgagtgggaggagaaggacgtcggcaacccactgccgagctggatctggaccttctatgacatcatctgtcacgacggcaagctctggtgggtggacaccgcggcgggcctcctcttgtgcgatccgttcgccgatgagccggacatgaagtacgttccactggaggacaaggaggacgacctccaatctgaagacgaagacgatgacgatggctgcggctactgcgccgagagagtgctcgccaccggccgcatcgtgcagctgatcgacggcaagttcaggtgtgtggaggtgagctctccaagccacggcgccgctcccgaggtctccatgcgcacgctggttaatccagagaccgcggagtgggcgcctgagtacacggtgagcttcgccgacatctgggccagcgagagctacaaggcgaccgagctgccggagaaggcccctcaactcaggaacgcgttcgtccaccccatgaacccggacgtgctgtacttcttcctgaagaagcatatcttgggcgtcgacgtgcgcgcgaggaaggtcgtggagtacgaggcccgcgactcttctgaaagcgttcttccatggaaactcccacccgcgctctccgcagtttcattgagaagatggaaaagggagagagtggcggagcgggaggtggtcggcaaccaggggcggtacggcaatggattagaatcatcgacggtgtgcaaggtttctgatgtccagtga</cdnaseq>

Protein Sequence

<aaseq>MAPPSWVILSCEPRVCGGGDDPVLPQGADVALSLAAPPRVAVLS VSRRVSPAEVDPCARCKSPFVLALDPSAGLVLLVAPPPPSPDDSGDLRSWTDRDGNER TFRVSLIPRPLYFVCDVAAATASHVPDPERLIFNNDLGVIAAPGGGRGNYMVVELQTI VGDDEATLLCFSSVTGEWEEKDVGNPLPSWIWTFYDIICHDGKLWWVDTAAGLLLCDP FADEPDMKYVPLEDKEDDLQSEDEDDDDGCGYCAERVLATGRIVQLIDGKFRCVEVSS PSHGAAPEVSMRTLVNPETAEWAPEYTVSFADIWASESYKATELPEKAPQLRNAFVHP MNPDVLYFFLKKHILGVDVRARKVVEYEARDSSESVLPWKLPPALSAVSLRRWKRERV AEREVVGNQGRYGNGLESSTVCKVSDVQ</aaseq>

Gene Sequence

<dnaseqindica>1..1144#4194..4312#atggcgcctccgtcgtgggtgatcctgagctgcgagccgcgggtgtgcggcggcggcgacgaccccgtcctgccgcagggagccgacgtcgccctctccctcgccgcgccgccgcgcgtcgcggtgctctcggtgtcccggcgcgtctcgccggccgaggtggacccctgcgccaggtgcaagtcccccttcgtcctcgcgctcgacccctccgcggggctcgtcctcctcgtcgcgccgccgccaccgtcccccgacgactccggcgacctgcggtcctggaccgaccgcgacggcaacgagcgcacgttccgcgtcagcctcatcccgcgcccgctctacttcgtctgcgacgtcgccgccgccaccgcctcccacgtccccgacccggagcgcctcatcttcaacaacgacctcggtgtcatcgccgcgccaggaggaggccgggggaactacatggtcgtcgagctccagaccatcgtcggcgatgacgaggccaccctgctctgcttctcgtccgtgaccggcgagtgggaggagaaggacgtcggcaacccactgccgagctggatctggaccttctatgacatcatctgtcacgacggcaagctctggtgggtggacaccgcggcgggcctcctcttgtgcgatccgttcgccgatgagccggacatgaagtacgttccactggaggacaaggaggacgacctccaatctgaagacgaagacgatgacgatggctgcggctactgcgccgagagagtgctcgccaccggccgcatcgtgcagctgatcgacggcaagttcaggtgtgtggaggtgagctctccaagccacggcgccgctcccgaggtctccatgcgcacgctggttaatccagagaccgcggagtgggcgcctgagtacacggtgagcttcgccgacatctgggccagcgagagctacaaggcgaccgagctgccggagaaggcccctcaactcaggaacgcgttcgtccaccccatgaacccggacgtgctgtacttcttcctgaagaagcatatcttgggcgtcgacgtgcgcgcgaggaaggtcgtggagtacgaggcccgcgactcttctgaaagcgttcttccatggaaactcccacccgcgctctccgcaggtaatgcgattccgcaagcttcacattttcctgtcaatgttctggtttgcagtacggatccaattgctcgtgtcagtgttgagcagctacagattatatcatcaattatatctgcttttgcgttcaatgtcatggcttgatcggttaattcgtgtgtttgatgtgtcatgttgattggtgtgtcgtgtgtatgtggcatgtgtgtaatgcctatgtttttcatgataactatgcagttgtgaattctcagcggaacggcgttcatttgagttgcttgcttggctgtttggttcctagagttcgatagatttggacaaattttggtctagaatgtatagtgaccatcttctatatatcttgacttttggatttggcatttttgacacttatgtgcacatctcttgcgcaagcagagctacaaaattttttttggatgtttacctgttttgacttttgcatttgccatttttgtttacctgttttgctgttttatgtccatatattccccaggaaagtttgagaaagtactagtacttgataagttttgttttactatacatttctagtttggtaagttctcacaaatacttgataagttttgttttaccatagaatctttgtgaaatgaaaatcgccagcaggtgatctatgacagttttaccccttagttaagttctacttcattttctccaatgcataacaacaggctagctagtttttaccaaatcgattacatattgttcagaattttgactaacttatgtttccatttccattatgttcaaaaacttatgtttccattgattgaaggtctgtcccaggaaggtgctgccaatggtgtgaatgatggagtgccatctgcatcgccgacttcgctgccgtctgatcccaaaggagcctagagtgggtccttgtgactgatagcccgttggcatttggaatgttcttcgcctccctcttgagaatggctgcagtgtttgcttattcctgtccgtgatgtcttaatttaagttttttgtgaggggcgatgaattgctttacttgtgtgaacggtattactgttgaaggcaaactgttttgacccttatgttaatttaactctgcagttttactatgccctcatgttatgctcctcttgattatggtttgtggtactgcatgctcaaaattggcaacttgtgtatgtgtctaacaaatttctgcttgcgtgaatatcacgggaaaaagccaatttatgcgctccgccatggacactccaagaaaagctctgaaattttgtttgtaacatcgagttttttttaaaatcttttacacaacgcatgcatttgtttcaaaaaattttggacatgaactaagagcacccgcaatggtaaagtaaggtgctctctataaaacatttatatctcagcaatagactagattaatagtaaaccacctcaatagtatgtctacatgggtatctatagctatctcatccattgcctcgtttttctctatagactatctctaagttagtagatagctttactctttctcttcatttaatctcttccaagtagaaaaatatgctgacatggatctcttgtagagagcctatagataaccattgcgggtgccataagtcattgttatcgttgacatgatcgagatatttttccactttaccaagtcattatagtatcttgttaatactccctccgtcatgaaccaatctcgtacctacgaggttggtttattttgagactgagaaagtatatcttaaataatatcttaaggattaaactatgctaaaattttgtttgtgttggttacctgtgacaatatgaagataaagattttatcttggtttccactagcacgcttatcaaactattaaacgatgtgttttatgtgaatactttctatatgaaagttgttttaaaatatcaaatatatccattttcaagtttgtaataagtgacctatataatccgatgaagttatacgactagcgtacgactgaaacggcgacggcgtaaagtgatgctgtagattggacctacgccacaagcccataacactctcatatcatatacataggcccatgtacaagtccaaaccaccatatcatgtcaacatggtcacacgctgcttctgccggagctttaggtcaatctgaaatgctgaatccactaactgtcaacttgatctcaacattctagtattattttcagtgtagtagatgttaccaatatcagttcatataactaggtaaagcaagttctttttttactcttttatatactataaccaccaagatcagttcatataactagcttaccaattatcgattgtgcttatgtcaaacaattaagctatgcacaattaactgagggccataagcattccaatagcatgtgaaaacccacttatactctcacagccgtaacatacaaacaaattatctggacagacttgtacaatgtaatgatgaatagaagaaactaagaaaagaattgaaaattagcacatgaagaagatccattaaaagctcatgtaagacggtgatttccacgcacacgaggaatctgttggtagtattgttgctgattccagggacccggccagacatcgtaattagccacggttgtgactaggcttttggaaggcccaatgagattgagattcggatcacaacctaataggtcagctcgcggatgtcacatatgccgtcgccgtggttgtacgagagtcggacgctcgtggtcgtatgtaaagcattttccttgtagtaattaaaagtcaattaattatacgctgatagatttcttattttacgtgcatgtatttaatgtgaatcttataatattcgaacgcaacctttgtatctcatttgctatctttcacttgcaggtgggcccagcagtcatcacccggtcaaagctccaggtccattttgcgtagctggcaaggcacatcctctccagtcgccagccatttaaatggcctaatcccctgtggcctctgcttcgaaagcaaaatggacaacacacaatttcattacgtgtagtttcattgagaagatggaaaagggagagagtggcggagcgggaggtggtcggcaaccaggggcggtacggcaatggattagaatcatcgacggtgtgcaaggtttctgatgtccagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0240700, RefSeq:Os01g0240700