Os10g0476100

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0476100| Description = Protein kinase-like domain containing protein| Version = NM_001071380.2 GI:297610655 GeneID:4348888| Length = 4555 b...")
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Gene Name

Os10g0476100

Description

Protein kinase-like domain containing protein

Version

NM_001071380.2 GI:297610655 GeneID:4348888

Length

4555 bp

Definition

Oryza sativa Japonica Group Os10g0476100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18188623..18193177

Sequence Coding Region

18188623..18188668,18189818..18190010,18190311..18190485,18190568..18190651,18190738..18190979
,18191060..18191285,18191423..18191502,18191585..18191669,18191842..18191973
,18192104..18192217,18192300..18192347,18192590..18192674,18192899..18192952
,18193056..18193177

Expression

GEO Profiles:Os10g0476100

Genome Context

<gbrowseImage1> name=NC_008403:18188623..18193177 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18188623..18193177 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcttctccggcgatgccatccgcggccgcgagggggtcagcgaggagttggttcaccaagctccaaaccagagagaaatccattgggaagaagaaagaattgcctcccaatggcaaggaagggaccgacgaggcgccatcgagcgctaccaagcagagggttgctgcggcgaagcagtacattgagaagcattacaaggaacagatgaaaaatttgcaggacaggaaagaaagaaggtgtagtctagaaaagaaactagcagatgctaacgtctccgaggaggagcagcacaacatagttaagcaatttgagaagaaagagacagagtatatgcgtatgcagaggcacaaaatgagtgttgatgattttgatcttttgacaatgatagggaaaggagcatttggtgaggttagagtctgcagagagaagaacacaggaaatgtttatgcgatgaagaaacttaggaagtcagaaatgcttcgtcgtggtcaggttgagcatgtcaaagctgaaagaaatcttcttgctgaagtggatcaccattgcattgttaagctatactgttcattccaagacagtgaatatctgtacctcataatggaatacctccctggaggcgacatgatgacattgctaatgaggaaagatacattgactgaggatgaggccaggttctatgttggtgaaacagttcttgcaatagaagcaatccacaggcacaactacatccacagagatatcaagcctgataatcttttattagatagacatggtcacttaagactgtcagattttggattatgcaaaccactagattattccaacttcccagacctgaatgagaaggatgttacgtctacaaaaccacagtcaacaaatggtgatgggagacagcaatctatgcccaaacgcacgcagcaagaacagctggagcactggcaaaagaacagaagaactttggcatactccactgtcggtacaccggactacattgctccagaagttcttctaaaaaagggttatggaatggagtgtgattggtggtcacttggagcaatcatgtatgaaatgctagtgggctatcccccattctattctgatgagcctatgacaacttgcagaaagatagtgaattggcgaacacatttgaaatttcctgaagaagcaaggctaatgacagatgcaaaagatcttataagcaaactcttatgcaatgttgaccaacgtcttggcacaaaaggggccgaggaaataaaggagcactcctggtttagtggagtagaatgggacaaattatatgaaatagaagcagcatatcaacctcaagtcactgatgagttagatactcagaattttgagaagtttgaagagtcttcagacaatattcaatgttcagcaaaggcgggaccttggagaaagatgctgtcttcaaaggatttgaattttgtgggctacacgtacaagaacttcgaacttgtgaatgatcctgaagtacttggaatggctgagttgaagaagaaggagaaggctaagagaccaagcgccaaatccctctttgattcttcacccgacgcagaggagcaaccagcaccagcaccagcaccagctgaaaacgacgaaggaagtaccaggagtacagagcctgacatgccaagaagcctgagcgcaccgtcgacatag</cdnaseq>

Protein Sequence

<aaseq>MAASPAMPSAAARGSARSWFTKLQTREKSIGKKKELPPNGKEGT DEAPSSATKQRVAAAKQYIEKHYKEQMKNLQDRKERRCSLEKKLADANVSEEEQHNIV KQFEKKETEYMRMQRHKMSVDDFDLLTMIGKGAFGEVRVCREKNTGNVYAMKKLRKSE MLRRGQVEHVKAERNLLAEVDHHCIVKLYCSFQDSEYLYLIMEYLPGGDMMTLLMRKD TLTEDEARFYVGETVLAIEAIHRHNYIHRDIKPDNLLLDRHGHLRLSDFGLCKPLDYS NFPDLNEKDVTSTKPQSTNGDGRQQSMPKRTQQEQLEHWQKNRRTLAYSTVGTPDYIA PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMTTCRKIVNWRTHLKFPEEAR LMTDAKDLISKLLCNVDQRLGTKGAEEIKEHSWFSGVEWDKLYEIEAAYQPQVTDELD TQNFEKFEESSDNIQCSAKAGPWRKMLSSKDLNFVGYTYKNFELVNDPEVLGMAELKK KEKAKRPSAKSLFDSSPDAEEQPAPAPAPAENDEGSTRSTEPDMPRSLSAPST</aaseq>

Gene Sequence

<dnaseqindica>1..46#1196..1388#1689..1863#1946..2029#2116..2357#2438..2663#2801..2880#2963..3047#3220..3351#3482..3595#3678..3725#3968..4052#4277..4330#4434..4555#atggcggcttctccggcgatgccatccgcggccgcgagggggtcaggtatactcggtttctctgaaacttgctcgcaatctcgcattgctgcagttttgctgggctgaaaggcaatgctgttcctgtccaatttctagctgcagttttattttggtgttattgctgaattttgataaacttaggcatatcgaacattttttatttttaattttaaaaatactagccaaatgtccgtgcgtagcaacggattattgaaaatagcaaaattagctattaggtctttgttgaacaaatatatttttgattggttgaaacacaagctttcatcttaaaaaaaatgacatgcttcgactcccccatatcctaatatcatggtccacatgtcaattatggtggtggtcaacactattatcttttaatagtagtatagaaacattttcaaaaaataaagtttagaaggatttgtttttaaaattaaaaattaaaaattaaaaaggttcaaaaaaataaaaaaaaactttttttggttcatgagctgcaattctgcaccgagttcctgaccaatctgtagtgcagaggcctagtgcatgtttctgcgacaccatcctgcagttaaattgatgagtataaaaatactccatatatagctcattgtaacaggttgagcataaaaaaaatgcaatggcctctgcagtgtctgcacatgtgctgcaccatgattgaatagtggcaacaaacttgggtgtatgttggttaacaatcaaggttcactactccgagaagcctggttgcgtgcctaacagcagaggccagaaatgcaatacatttccattatcgaaaagatggctccgagaagcatttcattagctgaaagatagacctgtccagattgatttacaaggggagtgaccgctgcaaatgcatgcgtggagatggtgttctcctcttctcaagtagccactcattttagggtacatttttagcctatgtctatttgtagcatcctcctcttctcttccaccaccttttcttgtctacctaaaaacacttcaaccaaaattctcttgactgtttcaggagagaagaaaattttggatatagtttgtaaatagaactgtagacatcattgtataagggttatacattttttgaagcaattgagttttctcctctccttggtggcaatggattcagcgaggagttggttcaccaagctccaaaccagagagaaatccattgggaagaagaaagaattgcctcccaatggcaaggaagggaccgacgaggcgccatcgagcgctaccaagcagagggttgctgcggcgaagcagtacattgagaagcattacaaggaacagatgaaaaatttgcaggacaggaaagaaaggtatggaggatcagcagcattttccagcttcctgtttttatctgttaaaatcatgttccaagcatttgatccgattgtagtgttgcacttttgtttcacacaacctcaagattgcctatgagaaaagccaaattgaccacaactaataatatgatcagtttcctcctgcaagaataagggatgatgtattcttaggacagtttattcatctaaattatgtagctttttctaactaatgcttacgatctttctcatgctattgttgatcctgttttaaccatgtaaatttggtttttacagaaggtgtagtctagaaaagaaactagcagatgctaacgtctccgaggaggagcagcacaacatagttaagcaatttgagaagaaagagacagagtatatgcgtatgcagaggcacaaaatgagtgttgatgattttgatcttttgacaatgatagggaaaggagcatttggtgaggtaaactaaactattcatgcaaacatggaaaaatctcttttgtgatccacttttctagttgctgcaatattttttcctctaggttagagtctgcagagagaagaacacaggaaatgtttatgcgatgaagaaacttaggaagtcagaaatgcttcgtcgtggtcaggtatgcctaaatcctttcaataattttgagtgcatatttacatcaattgtttgttctctgagttctatgtttttcatttcacaaaggttgagcatgtcaaagctgaaagaaatcttcttgctgaagtggatcaccattgcattgttaagctatactgttcattccaagacagtgaatatctgtacctcataatggaatacctccctggaggcgacatgatgacattgctaatgaggaaagatacattgactgaggatgaggccaggttctatgttggtgaaacagttcttgcaatagaagcaatccacaggcacaactacatccacaggtgtgtatatttgtagcttcatatcagcttcttcttaccgctgttgagatgttctgatgaacttagcacatgattttcagagatatcaagcctgataatcttttattagatagacatggtcacttaagactgtcagattttggattatgcaaaccactagattattccaacttcccagacctgaatgagaaggatgttacgtctacaaaaccacagtcaacaaatggtgatgggagacagcaatctatgcccaaacgcacgcagcaagaacagctggagcactggcaaaagaacagaagaactttggttagtagctagcaaatgtgccaacaatcattagaaacttcttcagaattcacctgttattccttgtgtcattatctatttctcaatgcattcagaattttcgtttccatgttttgactggcagttaatgatttcaggcatactccactgtcggtacaccggactacattgctccagaagttcttctaaaaaagggttatggaatggagtgtgattggtaagcatcgtttacataaatatctcgtgccatggacctcttgagtttgcagtaaagaaattgaataatttcaactatctaggtggtcacttggagcaatcatgtatgaaatgctagtgggctatcccccattctattctgatgagcctatgacaacttgcagaaaggtgatatatatttttcagacttgcagctatgaatatataatttcttgaccctcatttccactaattccacatttcagtagtctgtaaacaccttttccattatttaagaaaaaataaatcgtgtttgttcctgacattttttttaatttattgtgcccatatgggcacacagatagtgaattggcgaacacatttgaaatttcctgaagaagcaaggctaatgacagatgcaaaagatcttataagcaaactcttatgcaatgttgaccaacgtcttggcacaaaaggggccgaggaaataaaggttgttgtgtgttctttaatatagtgttttacattccttaaagcaattttttgcttccttgtccaaggaaatattagatatgctaatgaatttcgttaatagtattttgcatgtatatgtttggttttaggagcactcctggtttagtggagtagaatgggacaaattatatgaaatagaagcagcatatcaacctcaagtcactgatgagttagatactcagaattttgagaagtttgaagaggttaggggtcgtttcttttggcctaaaggaattcagtttcaataagttggtataaatgttattcctatggtgtgttttgcagtcttcagacaatattcaatgttcagcaaaggcgggaccttggagaaaggtaactctgtttttagatagtacatgttctcaagaattttttcccaaaagaaaaaaaaatgctctattgctaaagtaccaaaagtgaagataatctggaagcaaactcattttctaaccagttttgcaaaaccatacacaattgatcaattattagtcattagctttggaaaatacagtatatgcaaagaatttccaccttttagaagaaacatgatgacttacccattgtgtcttttgcagatgctgtcttcaaaggatttgaattttgtgggctacacgtacaagaacttcgaacttgtgaatgatcctgaagtacttggaatgggtactctactccccatcttctcaataagtaaccatgtttctttctcgagaatatcatagtaccagtgcaaacctaatgacatagagcatgtctcttccagaactgcattatgtttcttccatcctatttggagctataattctatacaaggccaactatttgaggcacatgattgagttgcaatatatgttctagtctttaatactcttttactttctacacagctgagttgaagaagaaggagaaggctaagagaccaagcgccaaatccctctttggtattccctcaagagccttggcagtgttgtgttcttcttcaattagaaggcacatttgatttgatatcttctcctcttttttttctttctgttgatgccatagattcttcacccgacgcagaggagcaaccagcaccagcaccagcaccagctgaaaacgacgaaggaagtaccaggagtacagagcctgacatgccaagaagcctgagcgcaccgtcgacatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0476100, RefSeq:Os10g0476100