Os01g0244000

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0244000| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001049104.2 GI:297596428 GeneID:4326752| ...")
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Gene Name

Os01g0244000

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001049104.2 GI:297596428 GeneID:4326752

Length

2673 bp

Definition

Oryza sativa Japonica Group Os01g0244000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7943263..7945935

Sequence Coding Region

7943263..7943303,7944621..7945935

Expression

GEO Profiles:Os01g0244000

Genome Context

<gbrowseImage1> name=NC_008394:7943263..7945935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7943263..7945935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcaaactacaaaggctgctgctgctgcgcctctgcaccacctccacctccacgcctccacacggtatcaccacttccgccgccgttgccgccgccgcagccgccgcggcatacgcgtacgcggaaccgctaggcctcacccgcgcgcccttctcctcctccgcctcgtcgccagccgagacgatggcgtccgcgtcgccgccgccgtcgacgtgggtgatcctgggcagcatcccgcgcgtctgcggcgccgacgagaagggggccgggggcgggatccctgcgggcgccgatctctccctcgcgctcaaggcgcccccgcgcgtctcgctgctcaccatcccttcgcggatcttcccgagcgccaccacgtccgacaacttccccagcgtcatggccgccgacccctccggcctcctcctcctccacgccgaccagggccgcgccaagggccccaccgtcatcgaccgccccggccgtcaggagttcatgtggcgccagttcgtcccgggctacttcgtcctcgacgccgccacggccaccgcggtcgctctccccgacccggagctcgtcatgcacatgggccacatgggactcctcgcctcccccgacggcggcggccgctacgtggtcgccgagctccagcccatcctccacgccgaccacgccacgctcctctgcttctcctccgacgtcggcgagtgggtcgagaaggaggtcgcctacccgttccctccccggcagttggcccccaacggcgccgtctcgcactccgggaggctctggttcgtcgacctctcctggtgcctcatcacctgcgaccccttcgcccccgcgccggcgctgcgcttcgtccctctcccgccgggcaaggagctgaggtgcagggaagcttggggagtgctcgacaagtaccgctgcgtgagggtgagcgccggcaagctgcggttcgtggacatgtacaaggcgaccgctccccatcagcgcggtcctcacaagatcagcgtgtggacgctggccgatccggactccgaggagtggacactggagcacgaggcgagcttcgccgagatctgggccgacgacagctacaaggcgaccgggctgccagacaagatccccgtgctcgcgctcatccaccccgagaacccggacgtggtctacttcttcctggaggagcacctcttcggcgtcgacgtgcgcgcgcgcaaggttgtggggtctgaggtctacgagctggtcgcgccgccgagcgaggtcctcgctactcgcttcgtccgcgcttgggagctgccaccggcgctctcctcagtagtcctcatggcttgtaggttttcagctgctttctgctaa</cdnaseq>

Protein Sequence

<aaseq>MFKLQRLLLLRLCTTSTSTPPHGITTSAAVAAAAAAAAYAYAEP LGLTRAPFSSSASSPAETMASASPPPSTWVILGSIPRVCGADEKGAGGGIPAGADLSL ALKAPPRVSLLTIPSRIFPSATTSDNFPSVMAADPSGLLLLHADQGRAKGPTVIDRPG RQEFMWRQFVPGYFVLDAATATAVALPDPELVMHMGHMGLLASPDGGGRYVVAELQPI LHADHATLLCFSSDVGEWVEKEVAYPFPPRQLAPNGAVSHSGRLWFVDLSWCLITCDP FAPAPALRFVPLPPGKELRCREAWGVLDKYRCVRVSAGKLRFVDMYKATAPHQRGPHK ISVWTLADPDSEEWTLEHEASFAEIWADDSYKATGLPDKIPVLALIHPENPDVVYFFL EEHLFGVDVRARKVVGSEVYELVAPPSEVLATRFVRAWELPPALSSVVLMACRFSAAF C</aaseq>

Gene Sequence

<dnaseqindica>2633..2673#1..1315#atgttcaaactacaaaggctgctgctgctgcgcctctgcaccacctccacctccacgcctccacacggtatcaccacttccgccgccgttgccgccgccgcagccgccgcggcatacgcgtacgcggaaccgctaggcctcacccgcgcgcccttctcctcctccgcctcgtcgccagccgagacgatggcgtccgcgtcgccgccgccgtcgacgtgggtgatcctgggcagcatcccgcgcgtctgcggcgccgacgagaagggggccgggggcgggatccctgcgggcgccgatctctccctcgcgctcaaggcgcccccgcgcgtctcgctgctcaccatcccttcgcggatcttcccgagcgccaccacgtccgacaacttccccagcgtcatggccgccgacccctccggcctcctcctcctccacgccgaccagggccgcgccaagggccccaccgtcatcgaccgccccggccgtcaggagttcatgtggcgccagttcgtcccgggctacttcgtcctcgacgccgccacggccaccgcggtcgctctccccgacccggagctcgtcatgcacatgggccacatgggactcctcgcctcccccgacggcggcggccgctacgtggtcgccgagctccagcccatcctccacgccgaccacgccacgctcctctgcttctcctccgacgtcggcgagtgggtcgagaaggaggtcgcctacccgttccctccccggcagttggcccccaacggcgccgtctcgcactccgggaggctctggttcgtcgacctctcctggtgcctcatcacctgcgaccccttcgcccccgcgccggcgctgcgcttcgtccctctcccgccgggcaaggagctgaggtgcagggaagcttggggagtgctcgacaagtaccgctgcgtgagggtgagcgccggcaagctgcggttcgtggacatgtacaaggcgaccgctccccatcagcgcggtcctcacaagatcagcgtgtggacgctggccgatccggactccgaggagtggacactggagcacgaggcgagcttcgccgagatctgggccgacgacagctacaaggcgaccgggctgccagacaagatccccgtgctcgcgctcatccaccccgagaacccggacgtggtctacttcttcctggaggagcacctcttcggcgtcgacgtgcgcgcgcgcaaggttgtggggtctgaggtctacgagctggtcgcgccgccgagcgaggtcctcgctactcgcttcgtccgcgcttgggagctgccaccggcgctctcctcaggtaatgaccacggtcaccacgcatcctggcatctgaggtgcatatttctggatgaattacaatcccatttgtgtacttgacaacaatgtgttgatttattgcttatgcaccttgatcacttcattgatatcttgttcattcattcttttaaagttatcatcgctctcatatggcttttgtgcattgtaaatttgtgatgtattttgctgtagcacatcattccattcagatgtagtatctgcataagcctgttgcataaatgtggggtcatgtgttattccatccagatggagtatgattttgcacagtgtccgaaaatcatacccgttcttacattctgttttctagaagtgatacttcttaatgttgatgcttctgtttctgtcaatagtattgttatcttgattatacagaaaatgacatctgaactcgatagccactgctattttcttgtttggtctctacaaccatctctcacgccatgtatttcgtcacacactttgtggcctgtgccatccaaatagtaactgtagatgtgttttcattttatattgtttgatcagttacaaagtctagataaatttgtctgagtgcccatcagtattactaatatcttgtgccaaattttctttgatccaggttcgaactgagtactgaccatatgatgttttgtgaaggtctggtatggtaaactctgcatcgatggctggttttttgacaatggtgggggtcctagtgtgctcagtaacttatgctgttttttgttcatcagttggtgaaatgttaggtagaatttggaatatcttgcaatgccttttatatctattagttgtatccttactttcatggatgaagaactgtaatccaaatgtacgcttggaattgtaatgccatgactctttcagtaattcctgcagcttgtcatccatacagattatttgatgcagtactgttacgcttggaattgtaatgctatgtgaggttattaacttattaccatctcatgtatgctaagctatattacttggctaatttgtgtctttggatggaacaatattgtctcttgagttacttcaagcgatgcgctttcagagtttcagtgccctaaaggctaaagctgcaatgctgttacgctctcttgagtgtggttctattgctttcgtgcgtttggtgatccatgctatagcttacactgctctatgaacttcaccctattttctcagctaaacttgcttatgagacgcttgcttctggttgtcatgtgtatacattaatactgattcaattttcatttgcttttcgaagtccatttttcagtagtcctcatggcttgtaggttttcagctgctttctgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0244000, RefSeq:Os01g0244000