Os01g0246700

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0246700| Description = Similar to WRKY transcription factor 1| Version = NM_001049112.1 GI:115435637 GeneID:4326760| Length = 2311 bp| Def...")
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Gene Name

Os01g0246700

Description

Similar to WRKY transcription factor 1

Version

NM_001049112.1 GI:115435637 GeneID:4326760

Length

2311 bp

Definition

Oryza sativa Japonica Group Os01g0246700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8083352..8085662

Sequence Coding Region

8083352..8083738,8083950..8084129,8084241..8084570,8084659..8084772,8084922..8085371
,8085381..8085662

Expression

GEO Profiles:Os01g0246700

Genome Context

<gbrowseImage1> name=NC_008394:8083352..8085662 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8083352..8085662 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgacgacagcggcggtggcggcggcagggcacgcaggtccgtcgaggtggacttcttctccgacgagaagaagaacatgaagaagagccgtgtctcgggcggcgtcgccgccgaggcggacgacgccaagggacccgccgccgccggcctcgccatcaagaaggaggacctcaccattaacgttagccgccgccgccttcttcgctcgtcgatcgccagacacctgtttaactcacggcgatctaacgcgtgtgctcgtccgtgttcgttgcagcttcttcccgccgggaacaacgcgaggagcgaccggtcgatggtggtcgacgacgacgcggcgtcgcggccggatcacgaggagaagagccggagcagcaacgagctcgcggcgatgcaggcggagctgggccgcatgaacgaggagaaccagcggctccgggggatgctgacccaggtgaccaccagctaccaggcgctgcagatgcatctcgtcgcgctcatgcagcaaaggcctcaaatgatgcagcctccgacccagccggagccacctccgcctcaccaggatggcaaggccgagggcgcggtcgtgccgaggcaattcctcgatctgggcccgtcctccggcgccggcggcgaggcggcggaggagccgtccaactcgtcgacggaggccggcagcccgcgtcggtcgtcgtctaccggcaacaaggaccaagaacgtggtgacagcccggacgcgccgtcgacggcggcggcgtggttgccgggacgcgccatggcgccgcagatgggcgccgccggcgcggcgggcaagagccatgatcagcaagcccaggatgccaacatgaggaaggcccgcgtctccgttcgcgcgcgatccgaagcgccaatcatcgccgatgggtgccaatggaggaagtacggtcagaagatggcgaagggaaacccttgtccacgcgcgtactaccgctgcaccatggccaccggctgcccggtgcggaagcaggtgcaacggtgcgcggaggaccggtccatcctgatcaccacgtacgagggcacgcacaaccacccgctgccgccggccgcgatggcgatggcgtccaccacgtcggcggcggcgtcgatgcttctgtcggggtccatgccgagcgccgacggcgccgcggggctcatgagctccaacttcctggcgcgcaccgtgctgccgtgctcgtccagcatggccaccatctcggcgtcggccccgttcccgacggtcacgctcgacctcacccacgcgccgccgggcgcgccgaacgccgtgccgctcaacgccgcgcggccgggcgcgccggcgccgcagttccaggtgccgctgccaggcggagggatggcgccggcgttcgccgtgccgccgcaggtgctgtacaaccagtccaagttctccggcctgcagatgtcctccgattcagccgaggccgccgccgccgccgcgcagttcgcgcaaccgaggccgccgatcgggcagctgcctggccctctctccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcgctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagcaacgcgaacaacaccaacaccaacaccacgagcaacaccaacaacacaagcagcaacaacacgacgagcaacaacaccaacagcgagacgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MEADDSGGGGGRARRSVEVDFFSDEKKNMKKSRVSGGVAAEADD AKGPAAAGLAIKKEDLTINVSRRRLLRSSIARHLFNSRRSNACARPCSLQLLPAGNNA RSDRSMVVDDDAASRPDHEEKSRSSNELAAMQAELGRMNEENQRLRGMLTQVTTSYQA LQMHLVALMQQRPQMMQPPTQPEPPPPHQDGKAEGAVVPRQFLDLGPSSGAGGEAAEE PSNSSTEAGSPRRSSSTGNKDQERGDSPDAPSTAAAWLPGRAMAPQMGAAGAAGKSHD QQAQDANMRKARVSVRARSEAPIIADGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPV RKQVQRCAEDRSILITTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMPSADGAAGL MSSNFLARTVLPCSSSMATISASAPFPTVTLDLTHAPPGAPNAVPLNAARPGAPAPQF QVPLPGGGMAPAFAVPPQVLYNQSKFSGLQMSSDSAEAAAAAAQFAQPRPPIGQLPGP LSDTVSAAAAAITADPNFTVALAAAITSIIGGQHAAAAGNSNANNTNTNTTSNTNNTS SNNTTSNNTNSETQ</aaseq>

Gene Sequence

<dnaseqindica>1..387#599..778#890..1219#1308..1421#1571..2020#2030..2311#atggaggccgacgacagcggcggtggcggcggcagggcacgcaggtccgtcgaggtggacttcttctccgacgagaagaagaacatgaagaagagccgtgtctcgggcggcgtcgccgccgaggcggacgacgccaagggacccgccgccgccggcctcgccatcaagaaggaggacctcaccattaacgttagccgccgccgccttcttcgctcgtcgatcgccagacacctgtttaactcacggcgatctaacgcgtgtgctcgtccgtgttcgttgcagcttcttcccgccgggaacaacgcgaggagcgaccggtcgatggtggtcgacgacgacgcggcgtcgcggccggatcacgaggagaagagccggagcagcaacgaggtaggtagctagcccggcagggccggttgatcgatacatacagcttagctaactaaaattcatcgtcatcgcgatctcgattattcgacggggttgaccctgaccgtgctagctcagcggcgagcatggtggatctgacccgagctgaccccgaccggtggtcatggatggatcgctcgatatttacgctctctcgtgtgatgttttgcagctcgcggcgatgcaggcggagctgggccgcatgaacgaggagaaccagcggctccgggggatgctgacccaggtgaccaccagctaccaggcgctgcagatgcatctcgtcgcgctcatgcagcaaaggcctcaaatgatgcagcctccgacccagccggagccacctccgcctcaccaggtaaaataattagtgtaaaaccaccctatattaccacagttattagtagtagtattacacagctacctggagtggaaataaccgggtttcccactttggtgtgtgtttcaggatggcaaggccgagggcgcggtcgtgccgaggcaattcctcgatctgggcccgtcctccggcgccggcggcgaggcggcggaggagccgtccaactcgtcgacggaggccggcagcccgcgtcggtcgtcgtctaccggcaacaaggaccaagaacgtggtgacagcccggacgcgccgtcgacggcggcggcgtggttgccgggacgcgccatggcgccgcagatgggcgccgccggcgcggcgggcaagagccatgatcagcaagcccaggatgccaacatgaggaaggcccgcgtctccgttcgcgcgcgatccgaagcgccaatcgtaagaccccaccactagcaaccacatcgatcacaggcattttctcatcgagacgtgctgaattccaaatcgttttggttccgtgcagatcgccgatgggtgccaatggaggaagtacggtcagaagatggcgaagggaaacccttgtccacgcgcgtactaccgctgcaccatggccaccggctgcccggtgcggaagcaggtaatgaccggacacgacgactcactgagatacgggtcaaaactcagaagtagagagtacgaagggctgggagtagcagtgctaccgtgtaggcaaggggtgttgtttgattggtctaactttgtgaacgtgacggaattgaccaacaggtgcaacggtgcgcggaggaccggtccatcctgatcaccacgtacgagggcacgcacaaccacccgctgccgccggccgcgatggcgatggcgtccaccacgtcggcggcggcgtcgatgcttctgtcggggtccatgccgagcgccgacggcgccgcggggctcatgagctccaacttcctggcgcgcaccgtgctgccgtgctcgtccagcatggccaccatctcggcgtcggccccgttcccgacggtcacgctcgacctcacccacgcgccgccgggcgcgccgaacgccgtgccgctcaacgccgcgcggccgggcgcgccggcgccgcagttccaggtgccgctgccaggcggagggatggcgccggcgttcgccgtgccgccgcaggtgctgtacaaccagtccaagttctccggcctgcagatgtcctccgattcagccgaggccgccgccgccgccgccgccgccgcgcagttcgcgcaaccgaggccgccgatcgggcagctgcctggccctctctccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcgctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagcaacgcgaacaacaccaacaccaacaccacgagcaacaccaacaacacaagcagcaacaacacgacgagcaacaacaccaacagcgagacgcagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0246700, RefSeq:Os01g0246700