Os01g0248600

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0248600| Description = GINS complex, Psf2 component family protein| Version = NM_001049120.1 GI:115435653 GeneID:4327215| Length = 4079 bp|...")
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Gene Name

Os01g0248600

Description

GINS complex, Psf2 component family protein

Version

NM_001049120.1 GI:115435653 GeneID:4327215

Length

4079 bp

Definition

Oryza sativa Japonica Group Os01g0248600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8177994..8182072

Sequence Coding Region

8178298..8178318,8178580..8178732,8179103..8179195,8179291..8179321,8179414..8179513
,8180006..8180120,8180485..8180559,8180663..8180710

Expression

GEO Profiles:Os01g0248600

Genome Context

<gbrowseImage1> name=NC_008394:8177994..8182072 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8177994..8182072 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgggcagtctgaccctcatctttctatcttctcaccctcagaggtggagttcgtggcggaggatgagattgtcgagatcgtccctaacattcgcatggaggccctcaacatgatatgcggggattttgggcccttcttcccgcaaattgcaagcaaagtgcctctttggctcgcggttgcactcaagaagcgtggcaaatgtaccatacgcacacctgactggatgactgttgaccgcttgacgcaggtattagatgcagaaagagagtcacccaaagaatttcagccattgccgttccactatattgaaatatctaagcttctctttgatcatgctcgtgatgacatctcagatgcatacctggtaagatctttgattgaggacatccgagatgtcagattccataaggttgagactggtctggagacaatatctggccgtactcatgctgtaaagctaaaaaatctctctgcaatggaagtgaatatcgtgcgtcctttcatggtgagaactttacaagcattctataagcatgatagcccacagatgattcagcaggcagataacacaggtagcagaccaacaccagttacagaccgtggtccaagaagagatctaaggcgcaggtaa</cdnaseq>

Protein Sequence

<aaseq>MAGQSDPHLSIFSPSEVEFVAEDEIVEIVPNIRMEALNMICGDF GPFFPQIASKVPLWLAVALKKRGKCTIRTPDWMTVDRLTQVLDAERESPKEFQPLPFH YIEISKLLFDHARDDISDAYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSA MEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSRPTPVTDRGPRRDLRRR</aaseq>

Gene Sequence

<dnaseqindica>3755..3775#3341..3493#2878..2970#2752..2782#2560..2659#1953..2067#1514..1588#1363..1410#gggttggagtcgccgctgttcctcccctcgcctcgcagcctccgcctctcctcgtctttccggctcaatctgcggagagggtggaggcgcgcgcgggccactgccaccgtgaggcagccgcactcgggcaccgggacctcgggaaccctagccggctggccccggtttattgcctgccccttctggctgctagcggccgggctgcttgacgatttgtgggtttccctttcccatttgctcaggtgagatgaaatggtgaactagaactatgatggtgaaatgagtctatgtttctttgaagtattttccattgccaatttgtgatttctgatttatgaatcagtgaatgcgctgcggagtcgctgtttgtaggatttgtaaaacacgaagatgaatgggggtattacatcgctttgtaggattttgtatttgaactatatctatataatattgtaatatttgcacattttgaacttgcttgttataaattagtcgatcattgatgttatgagatattattgttatttaactaaatttgtacctgtatatgagatttgctgtattcgaaaaattttggtatgtgattgaacttgtgaagtaggactaaccaacgaaaatttcttggctacgcaaccgaggactaccaacgtaaaattcatggctacgccactgcccctgctgcctgacgccgtcgacaatgacaggatggtcgtacaccatcgtcccccatcacggatgacgacaggaccgtgcactgctccggccccatcaggggtacagccaccctcagtggcggcggcaggattggctccttggttcctcctggtgtcaccatctgaagccagacctaaggaacatactaatcccatgtctttcccatctacttgtatccttattatggcgcccaaagttctattaattggactggtgatggctgtcatggagataatgcaagttaagaattataccctagcccaggggcaagacattctcaaaatttgtccgatttctccacacgaaatgtgtactgatcttctgagtttctcaattagatctcctgttataatagtgtagtagatcaggtaagaacaccttatgctgacaaaacatgtggaaagaacacttttgaatccatatcagttgttcagttcataacttcagatatttctacgtttaggaattatcttgacaagtttgacagggtagcatttgcatcactctttgaagaatgtatgctataaaagtttgacatcacagacgccaataggaattgaacaaacactgattcactttctttttcttaaagtttacagacactaaatcatcaaatagaggaagcaatttagtgccacggtggtcaagatggctgggcagtctgaccctcatctttctatcttctcaccctcagaggtaatcaagcctaaatcaatcctttcctcattgaatcatttcaagagcagggtctggattcatgggttccaagttcattttgttggcctatgtgctattgcaggtggagttcgtggcggaggatgagattgtcgagatcgtccctaacattcgcatggaggccctcaacatgatatgcgtgagttgccagtcccttcactggcatctattttcattcatttctatttttgaatactctcactgtccactcgttttacctcacatttatttttgggttgctgcgcttatctttcctatgtactttatgaatgattaattacattatactcaaaattcacatgttttgctgtgattgatcctcgtttcactggccagttataaattccttttgctgtttcattgactattggttgcttttgctcagctcattttccagatgaggttttctgttttctgtcccacatgaggttttctgctgtttgaagtctcaatacgtcaaatttggtcaacgcaacactcatactcaccaattcatcatatagggggattttgggcccttcttcccgcaaattgcaagcaaagtgcctctttggctcgcggttgcactcaagaagcgtggcaaatgtaccatacgcacacctgactggatgactgttggtaagttcctgcttgcttatctgagctgcttaatctcatgttttatcatagccaacatgtttatagtatttgctggtataataaattaataaatcataaagaaaggaggttctgtgcctaatcttattaccagttactaagtagtaatgcattcaacctacatgacagattgcgtaactattactccctccgtcccataatataagggattttggtgggatgtgacacatcctaggatagtcttaggatgcatcacatccttccaaaatcccttatattatgggacagaaggagtatatttttctccctgaaatttcttgtctgtgcactcttatagcatttaatgtcacaatctaatagaataatactgtttatatttgacatgcttacatgtgtcttagattctgactgcctgattgcatatttgtctgtgctacttctttacattttcatggtacgcggtctgttcactctttaactatttattgctagaccgcttgacgcaggtattagatgcagaaagagagtcacccaaagaatttcagccattgccgttccactatattgaaatatctaagcttctctttgatcagtaagtattcatatttcatagaaactcttgtagtaattctataataagaatctgcaaaacttatttctctctctctatatatatgtgtcaagtgctcgtgatgacatctcagatgcatacctggtgagttacagaaaccttcggaagaaatttccactgactaattggctctgatattatttggaaacaaaattttgcttacttctagctgcatgtaggtaagatctttgattgaggacatccgagatgtcagattccataaggttgagactggtctggagacaatatctggccgtactcatgctgtaaaggtatattctctccacactatagctactttatctgccgcttgtcctggctgctcagattgtgttgaagctattccatgtgttatacctttcttctatctactgtttgtagcatttatttttttaatcaattttttttgtagtgtatgtaaactataaaacttaacctttctcataagcatcactaacaaattaaacataaaactcgtctatttgtgatgtcacacgattgtgattgtaaaatgtaaactgtgtatgcttccatattcttactcaatatttaccatcagacttcttaaattatgacccattatgatcttttttccctgcttacctcatgcacatatatatatatatatttgcatttatacagctaaaaaatctctctgcaatggaagtgaatatcgtgcgtcctttcatggtgagaactttacaagcattctataagcatgatagcccacagatgattcagcaggcagataacacaggtagcagaccaacaccagttacagaccgtggtccaagagtaagccttcattttttccacatatgatttgttctcgtttcctagaaagagttgttttttcaatcaaaattcgctctaagatgatatatgcaaatagtttcgtaccaacggtgcataataactttctactacatagaattcaatcacaaaaaagatgcttctcatttgtttcttgaaatcaagcttctaataacatgttattcatttctgcggtgatattatcaataaacattcctaaattcccatcatttttttttgcagagagatctaaggcgcaggtaacaagcaggatgtgtatctatcccttgaaaattttactgtgtgtagattgcagtaaatgaaggtacttgtgatctgtatctcactagctagaagccaactgcgtttccccaatttgttgtgtgtgtaccaaaattttataggactaataacatttgacatggttttgtttttgaagaagcgaagatagtaagatacatcaattatctgtcacaaaagggagattcctcatgtattctggatggatgtaacttatgtgatgtatttttactatttctggcataacctaaatttcctgactttattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0248600, RefSeq:Os01g0248600