Os01g0249100

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0249100| Description = Similar to Expansin Os-EXPA3| Version = NM_001049123.1 GI:115435659 GeneID:4327218| Length = 863 bp| Definition = O...")
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Gene Name

Os01g0249100

Description

Similar to Expansin Os-EXPA3

Version

NM_001049123.1 GI:115435659 GeneID:4327218

Length

863 bp

Definition

Oryza sativa Japonica Group Os01g0249100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8200902..8201764

Sequence Coding Region

8200902..8201533,8201632..8201764

Expression

GEO Profiles:Os01g0249100

Genome Context

<gbrowseImage1> name=NC_008394:8200902..8201764 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8200902..8201764 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagaagctgttggtcgtcttgttcctaagcctgtgctgcgcgtctcggctccgcggcgaggcggcgcagcagtggacgtcggccaccgccacgttctacggcggcagcgacgcgtccggcaccatgggtggatcgtgcgggtacggcaacatgtacagcgccgggtacgggacgaacacgacggcgctgagctcggcgctgtacggcgacggcgcgtcgtgcggcgcgtgctacctcgtcacctgcgacgcctcggcgacgcggtggtgcaagaacggcacgtcggtgaccgtgacggcgaccaactactgcccgcccaactacagcgagtccggcgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagccggcgtgggaggcgatcgccgtgtacagctccggcatcgtccccgtcaggtacgcgcggacgccgtgcaggcgcgtcggcggcatccggttcggcatcgccgggcacgactactacgagctggtgctcgtcaccaacgtcgccggcagcggcgccgtggcggcggcgtgggtgaagggctccgggacggagtggctgtcgatgagccggaactggggggagaactggcagagcaacgcgtacctcaccggccaggcgctgtcgttcagggtgcaggccgacgacggcggcgtcgtcacggcgtacgacgtcgctccggcgaactggcagttcgggtccacctaccagtccgacgtcaacttctcctactag</cdnaseq>

Protein Sequence

<aaseq>MEKKLLVVLFLSLCCASRLRGEAAQQWTSATATFYGGSDASGTM GGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTA TNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGI RFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQAL SFRVQADDGGVVTAYDVAPANWQFGSTYQSDVNFSY</aaseq>

Gene Sequence

<dnaseqindica>232..863#1..133#atggagaagaagctgttggtcgtcttgttcctaagcctgtgctgcgcgtctcggctccgcggcgaggcggcgcagcagtggacgtcggccaccgccacgttctacggcggcagcgacgcgtccggcaccatgggtaacctggacgaacaccttaactgcgtgacagctttgatcaccatccggccaatgcggcagtgcagcacgcatcgcttagctgctttgatcatgcaggtggatcgtgcgggtacggcaacatgtacagcgccgggtacgggacgaacacgacggcgctgagctcggcgctgtacggcgacggcgcgtcgtgcggcgcgtgctacctcgtcacctgcgacgcctcggcgacgcggtggtgcaagaacggcacgtcggtgaccgtgacggcgaccaactactgcccgcccaactacagcgagtccggcgacgccggcgggtggtgcaacccgccgcggcgccacttcgacatgtcgcagccggcgtgggaggcgatcgccgtgtacagctccggcatcgtccccgtcaggtacgcgcggacgccgtgcaggcgcgtcggcggcatccggttcggcatcgccgggcacgactactacgagctggtgctcgtcaccaacgtcgccggcagcggcgccgtggcggcggcgtgggtgaagggctccgggacggagtggctgtcgatgagccggaactggggggagaactggcagagcaacgcgtacctcaccggccaggcgctgtcgttcagggtgcaggccgacgacggcggcgtcgtcacggcgtacgacgtcgctccggcgaactggcagttcgggtccacctaccagtccgacgtcaacttctcctactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0249100, RefSeq:Os01g0249100