Os01g0249200

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0249200| Description = Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn])| Version = NM_001049124.1 GI:115435661 Gene...")
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Gene Name

Os01g0249200

Description

Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn])

Version

NM_001049124.1 GI:115435661 GeneID:4327219

Length

3138 bp

Definition

Oryza sativa Japonica Group Os01g0249200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8202812..8205949

Sequence Coding Region

8203067..8203611,8205711..8205849

Expression

GEO Profiles:Os01g0249200

Genome Context

<gbrowseImage1> name=NC_008394:8202812..8205949 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8202812..8205949 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggggctgcagggtcgtcgtggtcctctctgctcctcgcagcggtggcggtggcgctcgccgtcgccgcagcgccgtcgctcgccggcgacccggactacctccaggacatctgcgtcgccgacctcaactccgaggtgaaggtgaacgggttcccgtgcaaggcgaacgcgacggcggacgacttcttctccggcgtgctcgccagccccggcgccgccgccaacaccaccaccggcgccgtggtcaccggcgccaacgtcgagaaggtcccgggcctcaacaccctgggcgtctccctcgcccgcatcgactacgcccccggcggcctcaacccgccgcacacccacccgcgcgccaccgaggtcgtcttcgtcctctacggcgagctcgacgtcggcttcgtcaccaccgccaacaagctcctctcccgcaccatctcccagggcgacgtcttcgtcttcccccgcggcctcgtccacttccagaggaacaccggcgacaagcccgccgccgtcgtctccgccttcaacagccagctccccggcacgcagtccatcgccgccacgctcttcgccgcctcgccggcggtgcccgacgccgtcctcgccaaggccttccagatcgacgacgaggaggtggacaagatcaaggccaagtttgcccccaagaagacctag</cdnaseq>

Protein Sequence

<aaseq>MAGAAGSSWSSLLLAAVAVALAVAAAPSLAGDPDYLQDICVADL NSEVKVNGFPCKANATADDFFSGVLASPGAAANTTTGAVVTGANVEKVPGLNTLGVSL ARIDYAPGGLNPPHTHPRATEVVFVLYGELDVGFVTTANKLLSRTISQGDVFVFPRGL VHFQRNTGDKPAAVVSAFNSQLPGTQSIAATLFAASPAVPDAVLAKAFQIDDEEVDKI KAKFAPKKT</aaseq>

Gene Sequence

<dnaseqindica>2339..2883#101..239#gctcaacgacaagtggtcaacacacatcaatcaattaaccatcggcgagcagaagaagagcagaggctcagctagcaggcgagagagatcagcgagcaggatggctggggctgcagggtcgtcgtggtcctctctgctcctcgcagcggtggcggtggcgctcgccgtcgccgcagcgccgtcgctcgccggcgacccggactacctccaggacatctgcgtcgccgacctcaactccggttcgtacatatgatctgtccatgttcttggcaagatcttaatttggtgtgtgtgtgtggaactgtggatcgattggaagcaggatttcccaaaccgccggggccagggttaccgtgccctggcggtaagcacggttactgccgtgaaaaatcgtacaaaatttatcaaaaatttaaattattttttaaatttatttaaatttaaggaggttaccgcagtatttgtattaccgtaccacgcggtaagaacggtaaccatagtaaacgcgtggttaccgacggtaatgtaaagcctggtaggaagatcaccgatcgactgctgcttagcctgcttatgcatggtctttgcttaactggagctgcctgacgatggttcagattaaggctagagatatgctacattttttttttgggagagatatgctacattgctactcagcgtttaattactttctttttttgtgaaaaaaataaattttctatgaaaaaagagagtcaggatcttttttaagaaaataaagagaatcgaagctcgccaaagtcgccatcgatgggtagaatgtctgtagcagcttcggtttcgcattgagtgtggtacgaatatacagcgtgctagtactacgattttgtcatgtcttgcgtaggctagactccacgcgcgttacgtagttattgctgaatccaacgccaactcatttccatggacggatggtgtactatatattgcatttccatttcatactcattttcttcttaaattaaaaatgcaattatcccctatatatgcgtcttcttgcctctccttgtagatcctgcaaacaatttgtcgattggatacaattaagattgatgtagtccatccagaaactagtttattagagttctttcaaaagaaaaaggaatactagctagttattagagcatattaggagtagccatcagtccatccataatctgccaatttattgttagtgcatctgctaaaggcgtcaatggaccctgcctactgaacggaaccgtacagaccatgtgcccaaactgctgccttgtaatttttggccctgtttagatgggactaaaacttttaagtccctatcacatcggatgtttgaaaattaattataaatattaaacgtagactattaataaaacccatccataatcttggactaatttgcgagacgaatctaatgagcctaattaatccatgattagcctatgtgatgttacagtaaacattctctaattatagattaattaggcttaaaaaatttgtctcgtgaattagcttttatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaagacagggactaaagttaagtccctggatgtaaaaaccaccttactctcgtggtaactctcttcccaatacgtctacgtttgtaccatgtgtttcaaaacaaaacaaaacgaagccttgctaattcttacccctttttctcacattgacaaaactaaaaatgacaatcaattaaacaagccctaatatataaccgcaaccacttaatattaggattagcggttttattgagttagtatgaatcaataaatcgtaaagtgaacataaccggttatgtttctttcaatgatggtttcggagatgctcatataggataggttgtatgcatgtgtgcgtgcacgttcatagaggataagcatacgcgcattgtgagcatggtttacaaccgctaggtacgataaatgtaaaaccacgataaccccattaaacccaaataaatttaaaaataatttaaatttttgataaatttattatggtttgccatggttatcgcggttaccgcttggtaaccacatttactgcgggggcggtaaccccaccccagacggtaaggaaaccttatagttgtgagtgcttacatttgtgttgtgttgaaaaaaaaattgtgcgaattgacaaattgctcggtaaatcggcccagttcaaaagaaaaaactcaaaccaaaaaatccaaatctcagtaaaattcttttgaccaacaagttttaccggtttttctttgtaacgtaacgggattatcatcaataacagaggtgaaggtgaacgggttcccgtgcaaggcgaacgcgacggcggacgacttcttctccggcgtgctcgccagccccggcgccgccgccaacaccaccaccggcgccgtggtcaccggcgccaacgtcgagaaggtcccgggcctcaacaccctgggcgtctccctcgcccgcatcgactacgcccccggcggcctcaacccgccgcacacccacccgcgcgccaccgaggtcgtcttcgtcctctacggcgagctcgacgtcggcttcgtcaccaccgccaacaagctcctctcccgcaccatctcccagggcgacgtcttcgtcttcccccgcggcctcgtccacttccagaggaacaccggcgacaagcccgccgccgtcgtctccgccttcaacagccagctccccggcacgcagtccatcgccgccacgctcttcgccgcctcgccggcggtgcccgacgccgtcctcgccaaggccttccagatcgacgacgaggaggtggacaagatcaaggccaagtttgcccccaagaagacctagacgatataagattataaggcgacgtatacattggagagatttgaggtttcaaacttatcttaaaatttgaattgatttgtctgtgatttgatgattaactatatgtacttgtcgatgatataatgccatcttgatgacacttatttgtgtaagagcgacatgcaaaatgtagtagtaatagagaagtttcttgtaataagttgctggggagaacgatgatgatttgttaatgattagtacaatcattttggctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0249200, RefSeq:Os01g0249200