Os01g0249300

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0249300| Description = Lg106-like family protein| Version = NM_001049125.1 GI:115435663 GeneID:4327220| Length = 2612 bp| Definition = Ory...")
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Gene Name

Os01g0249300

Description

Lg106-like family protein

Version

NM_001049125.1 GI:115435663 GeneID:4327220

Length

2612 bp

Definition

Oryza sativa Japonica Group Os01g0249300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8211460..8214071

Sequence Coding Region

8211732..8211772,8211866..8211926,8212069..8212131,8212234..8212281,8212363..8212425
,8212566..8212670

Expression

GEO Profiles:Os01g0249300

Genome Context

<gbrowseImage1> name=NC_008394:8211460..8214071 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8211460..8214071 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccctatggaccaaactgaagataactccatgccctcagctcaagaacaggaattagcaatcaagaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaaggatcatgaacgggcctattttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagcagcgttccaggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgctgaggatatgaacatcaactga</cdnaseq>

Protein Sequence

<aaseq>MSDMKDTNAAGPETVGNPDPMDQTEDNSMPSAQEQELAIKKKFG GLMPKKPPLISKDHERAYFDSADWALGKSGQQGAAKPKGPLEALRPKLQPTRQQQQRS RRLINTSSENEDGDGAGAEDMNIN</aaseq>

Gene Sequence

<dnaseqindica>2300..2340#2146..2206#1941..2003#1791..1838#1647..1709#1402..1506#gtcaactcctctcctctcctcgcgagttcgcgcaccgcctccgccgatctccatctccgccgccgtcctgctgcttccgccgcatcacatcccggtgagcatccctatccgtcacgctcacgcgcatcctctctcttagcgcgtaaaagaagaagaaatctcccgtctcgttctcgttactgtctcctccgctcctctccttgcgccgctgccaagacgaacaggggggagggccgggcggcgatctccatctggcgagcagagcagagcagcggaggtgaggggatcctggtgagcatccgcgattcatctctctctctctctcctccaccccaccgggactggaatttgcttgcgttcgtgaaccctactagcttctcttctagatctggaagaagctcttctcctcctccttaacttgatagccttaaacctctcttaattcaagtaataacagtttgtttgttcacccaaaagtttcccaagttggatccgcccctgtccagcaccccaccgtcgagtccgagcgactaatagtgtttttcggtgatcgactgatttttataggctgtccgtagtggagcccgggcagccacccgacctgcccgggagctgtctccgcccttgttcttagtgtaattccctggcattcagattcagggccagtctagtgatattttgtcttcgatatttgtggagcaggtagagtagtcagcatacccctttctcgttgcttcttattagttggctatggatgaagatgtaaacatttaaggcctggtttagttcccaactttttcttcaaacttccaacttttccatcacatcaaaactttcctacacacacaaacttccaacttttccgtcagatcgttccaatttcaatcaaacttccaattttggcgtgaactaaacacacccttaacttgttctatagggcacaaaggatacaggggtgattaaattactctgtaatttccatatctagcattagtgtaagtacagttggcattttggcccaagacctattaacagcttttgagattcagcaatgccaagtgccaactaaaggaagctatcaaattgactatcctaatggatcaactaatactcagtttcatttagcctgtaggtaaaattgtaaaaggctaggaacagactaataatttgttatcaatattacttccctaatcatcatcatgtttaaaaagcaccagttatttgaagatgctgattgctgagttgaactgaattgacattgggcaattttcctcagcctctggctcatttttgtcttgacattctgttccccaagaaatcatgccttagatatggttttttatgctgttggcatcttttatcatgtgaattttgacaatagtacttctcgtttctagcatcatgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccctatggaccaaactgaagataactccatgccctcagctcaagaacaggtcatttccttggctagatcttatgatatagtcatttcattgttacccctatgcccttgtaaatgcaacgtatagcaacattactctaaataactggcatggccaattttgttaaacacaccatctactcctttctgtaggaattagcaatcaagaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaaggtaatgagtttgcctagccttatttctatgtgcaaagacatcagcagttattagtgattaaatttctctctgtaattgaaggatcatgaacgggcctattttgattctgctgactgggctctgggaaaggtatcacttctttctgtggcatcaattttattctgggtgctaattacctgagttccacattcaaccgtgctgatattgatattctgacatttggctctgcagtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagttgcaggtattctctttatacatgtccatatttagcacctgaaatgagcatgttgtttgctcaaattcagctcctctgacttccaaacttctacactattttcaaatttcaaaacaaagtaattgccatcacattgctcttatttcagccaacacgacaacagcagcagcgttccaggcgcttgattaacacctcatcagaaaacgagggtatgctttcgtggttggttttgccaaatggcctcagaaaacacttgtgtataagttatgtaacttcgctaaccatctattcacaacatgcagatggagacggtgctggtgctgaggatatgaacatcaactgacctgctcagggagtgttctgttgggaacctcatgattcaaagcagctcattgttcgtggatcgcagggaaggatatgatgtctttgatgtttccatagatatgaaaagaaatgttgtatttttcaaagaccgatgttaattcatcgcacagcttacctatatctgtgccaaatttcagcatagactaaaccattgtttgcatacggcgttgcactccagtcgtgctacggcctatttgtcaatggatatttttaaacaagtttgtattgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0249300, RefSeq:Os01g0249300