Os01g0251000

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0251000| Description = Conserved hypothetical protein| Version = NM_001049133.1 GI:115435679 GeneID:4327103| Length = 4652 bp| Definition ...")
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Gene Name

Os01g0251000

Description

Conserved hypothetical protein

Version

NM_001049133.1 GI:115435679 GeneID:4327103

Length

4652 bp

Definition

Oryza sativa Japonica Group Os01g0251000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8283449..8288100

Sequence Coding Region

8283497..8283762,8284531..8284760,8285010..8285369,8285840..8286177,8287379..8287576

Expression

GEO Profiles:Os01g0251000

Genome Context

<gbrowseImage1> name=NC_008394:8283449..8288100 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8283449..8288100 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgcggcggatgcgatggatggcggacggggacgggcggtgggagctggacgtggagacgccggcgacgatggagggcgcggcgcgccccgtccccggcgacccgctgccgctcggcctctcgcgggggccccgggtcacccgcacgaagcagctcgacttcctccaccgcttcatggcctcgccgctcgtcccctccttctccgcctccggcgccggcctctccgtccaccacgcccacctcgtccacctcgcccacaacttgtcttttactatcttggagcaacttcatgtacagaagcttgtagctgttgtgaaagagaagttatcaaatcggcaagaggtctcctggtccaatgatatcaaaaggcacctgcatgatgttatgtctctaggtgttggcacagaactcttgattacaccagataccactttgctactggagctgtacaatctgaagaagggggatcggggcaaagcaatatttcgacacaagcttcctcatcaaaatattacattagaagcatcttggcctggattattcattgataaaaacggggtttactgggatgtgccattgtcattatcagctgacctggcttcagttggctccgagtctggattgagttatcatgtactattgcagcagaatagtggagaaccaaaatgttttggtggtggtgaagaaaccagtgatgttcctgttgctctgttaccagggttatgtgctaaggcagctgtttcgattaagaaaagcattgatgtttggaggaaaaaagaagataagctaaaaaatgtccagccgtatgatgtatttctctcagaacctcatgtttcgttcaccgggatcattggtgcagtagccagtggttcttttggggattgctcaaaaagaatgtccatgcaaaatgaaatactaaaatccaatgcctttaaatattttgatgagaggaacaagtttgctgcctttgcagacctctttgcgtctgttaattttacagctcaacacgggaattttcagaggcttctcctggatttgacaagggtaagcgcccggttagatatatcctcaggatcattgttcttacgtggtgcttctcagcttgcacaagatttcttcttctctcgacgccctgatttagagacattctgtgatgtttgtcctgatgtgattgtttctcttcaacaacagatagttggacccttcagctttcgtgttgaatccacagttaccattgaccctaaaaaacaagaccatttcgttcgtgtggacgactcagtttttgcaatcgactgggctctgaaggtcctgggttccgcaaaggccactgcttggtattctcctaagcatcaggaggcaatggtggagcttcggttctttgagacctga</cdnaseq>

Protein Sequence

<aaseq>MLRRMRWMADGDGRWELDVETPATMEGAARPVPGDPLPLGLSRG PRVTRTKQLDFLHRFMASPLVPSFSASGAGLSVHHAHLVHLAHNLSFTILEQLHVQKL VAVVKEKLSNRQEVSWSNDIKRHLHDVMSLGVGTELLITPDTTLLLELYNLKKGDRGK AIFRHKLPHQNITLEASWPGLFIDKNGVYWDVPLSLSADLASVGSESGLSYHVLLQQN SGEPKCFGGGEETSDVPVALLPGLCAKAAVSIKKSIDVWRKKEDKLKNVQPYDVFLSE PHVSFTGIIGAVASGSFGDCSKRMSMQNEILKSNAFKYFDERNKFAAFADLFASVNFT AQHGNFQRLLLDLTRVSARLDISSGSLFLRGASQLAQDFFFSRRPDLETFCDVCPDVI VSLQQQIVGPFSFRVESTVTIDPKKQDHFVRVDDSVFAIDWALKVLGSAKATAWYSPK HQEAMVELRFFET</aaseq>

Gene Sequence

<dnaseqindica>49..314#1083..1312#1562..1921#2392..2729#3931..4128#accagcttcctttgcgccgcccgcgtccgacgcgcggcggcggcggagatgttgcggcggatgcgatggatggcggacggggacgggcggtgggagctggacgtggagacgccggcgacgatggagggcgcggcgcgccccgtccccggcgacccgctgccgctcggcctctcgcgggggccccgggtcacccgcacgaagcagctcgacttcctccaccgcttcatggcctcgccgctcgtcccctccttctccgcctccggcgccggcctctccgtccaccacgcccacctcgtccacctcgcccacaacttgtaagtggtaactgaaagtcactcccgtctccccccactcacggtcgatcttacgagagagagatagagagagagagagatagagagagagagagagagacagaggaagtgctcgtatttaggctgctgcggttaattagatagcgaaatgcaggcttgcaatgttgcaaaattcaagtgagaaaaatggtatctgtacatatctacgcagctcaagtttatgcggttattagattctgaaatgtggttcgcaacgtcacgccgctcaaacttctaatgaactgacgatggatgtgtttttgtgtgcttggttcctgtaggttcatttgaggtaaccgtggaataattctagctatgtagtctgcttttttcttaaatggttcgagattggtttcgggattatgtaaaaaacatctgcttggagccatcaccttctagtccatatatgccaatgtatgtgattgagtatgtgtcaggagactcaggatctcaagggcaatggtttctgtacccgcttaccaatcatcaacagtctgctagataaaccatcagtagtagatttgtccagttctgtttctaaacagaatttggatattattttcgttcattccaaccctttcctgtcataggcaaaaaaaatctgtaaaattcaacgattgcttgcccctgattgtgacatatgcactggcattaacaacccggtgtgtaagatgtatctgaccaaaacacatgtgcactaccattaacgacccggcgtattcttttcaggtcttttactatcttggagcaacttcatgtacagaagcttgtagctgttgtgaaagagaagttatcaaatcggcaagaggtctcctggtccaatgatatcaaaaggcacctgcatgatgttatgtctctaggtgttggcacagaactcttgattacaccagataccactttgctactggagctgtacaatctgaagaagggggatcggggcaaagcaatatttcgacacaaggcaaattatctggatactttttatgctatttggtatatattagctatttgtgggtattcatggtgcttacactgggattctcaatagaacacattatgttcctatattgattaggtatctagttatgaaggtttgacttgactcatggaaaatttcatccttctttatggaacaatcagtttacttaactaatgatagttgttactaaattttttggattaaaactgaagatttcttcattgattccagcttcctcatcaaaatattacattagaagcatcttggcctggattattcattgataaaaacggggtttactgggatgtgccattgtcattatcagctgacctggcttcagttggctccgagtctggattgagttatcatgtactattgcagcagaatagtggagaaccaaaatgttttggtggtggtgaagaaaccagtgatgttcctgttgctctgttaccagggttatgtgctaaggcagctgtttcgattaagaaaagcattgatgtttggaggaaaaaagaagataagctaaaaaatgtccagccgtatgatgtatttctctcagaacctcatgtttcgttcaccgggatcattggtaagcattcacctttcctgttgttgatcttcggaaattagttatgtaagcttatttcaaggaaacactcttgcttctacttgcttagaggtcctgctattgctttcctagctgccttataaacgttttcattcacaagtcatgctgtcctctttgttgacacattttctggaatataacttattgatcaatgcatatgtttcctggcattgtgatgcatcttgagataccatatgtcaatagtagtgttcattctcaatggctgatatactatctacagcttggtaaaccacctgtcctgtatgatttactgccaagtgtttggagctatgtccattgaagaatcatgaacacctatagttgcatgggtacatgaattaattatatttttaattctgtaaccctctctattagatttacgtgttatcagctgtgcacaaaataactatttctactttctttttgttcaggtgcagtagccagtggttcttttggggattgctcaaaaagaatgtccatgcaaaatgaaatactaaaatccaatgcctttaaatattttgatgagaggaacaagtttgctgcctttgcagacctctttgcgtctgttaattttacagctcaacacgggaattttcagaggcttctcctggatttgacaagggtaagcgcccggttagatatatcctcaggatcattgttcttacgtggtgcttctcagcttgcacaagatttcttcttctctcgacgccctgatttagagacattctgtgatgtttgtcctgatgtgattgtttctcttcaacaacaggtgaatcacatcttcctttttcatcagcttgtgcttttatacctagaaagctagaactagaaggccattctgtatgaagattaccctgacacaaattcatgtgatctatttactcttttgttttgctttcatattttcaaatggatatggttcgttgttgttcaaccaataggtggatgtatatttttcccgacattctttactataataattagtcgatatttcaagtgataatagaaataaggtatgaagacttcaattgtattgccattttccagcaagatagaaaacattggtggtactttattatatacaaaaatattctgacatatctagtttatcgatgtttctgtagaaacaattgcttggtgtcctagatattcgctacttcagttcagatatcagttttccttgaaatcaataaactacttagttatgagggtcaagggatgctgctctagcctgcagcatccgtatcaccgttttcatgttaaaatcaactttggaatttatgatgtctatccaaactggcatagataattactactaatttcatgctttaaaataggtgattcccctacttagtgtttttgtttatcaccaaataatatcatttacaaaatctcagtgctgcttggcacattttctgactgatgattgcagacttgtggtattgacgtctggtttttactgttccagttacatgtcgaaatgtgtaaagtgattatgaaaaccggttagatactggggcaaacgccaaatattaagtaaagctctcatataatcattaacataagccagtgaatgtaagagagcttaactatatgtcatccaattgtgtttagatatatagccccatctcctagttcgtactgtgacagaagatatcatgacatgcagttttagtatgtaaatcctattgtactctacttctgacattaatgaacaaatttcatttaataaaattttgaatgataaggtaaacatatcatgattacatccaggttgtctaattgcagacggattctattgtataccttttttaccctttttttccttgttgctagctttttccttattttccgagaagataaattaactagacaagatgattatgttacataggatgctatcatagaaaatttcaagttcacactattctttgttactttaagttcactcttctttgttcttcttgcagatagttggacccttcagctttcgtgttgaatccacagttaccattgaccctaaaaaacaagaccatttcgttcgtgtggacgactcagtttttgcaatcgactgggctctgaaggtcctgggttccgcaaaggccactgcttggtattctcctaagcatcaggaggcaatggtggagcttcggttctttgagacctgaagaggttggctcatcgtatcacataaacatgattttcaaaggctttctttctcgtattggtgccaatgagaactaggtcaggtgactgtagatgttacgcagtgtgcttcatcaaggcagtttgtagatgtgatcaagtttatctcggtgtcttgcattcacctgttgaagactgttattcttgtaggctgtagttctgttcattggttaaaacagcttgctgtttaacaggcaatgagccttgacggagggcagttcttagattgtttcggttctgtagaatagtgtagttatgcaataagtcaatacgtgtcgacgacaatatatttctagttgtgtttcatacttgctttgggcatcagaagaatacttgctgatgtaagtgatcgtcatctgaatgccgtctgttatatattcatccactgattgctcggtcaggcctgaagagtagttgatctatcttacaagttgaattgttgatgcgaatcacatctgataaatgaaatcttctcagaaataagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0251000, RefSeq:Os01g0251000