Os10g0476400

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0476400| Description = Snf7 family protein| Version = NM_001071383.1 GI:115482509 GeneID:4348891| Length = 3250 bp| Definition = Oryza sat...")
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Gene Name

Os10g0476400

Description

Snf7 family protein

Version

NM_001071383.1 GI:115482509 GeneID:4348891

Length

3250 bp

Definition

Oryza sativa Japonica Group Os10g0476400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18204024..18207273

Sequence Coding Region

18204187..18204238,18204723..18204778,18204869..18204904,18205038..18205118,18205237..18205308
,18205571..18205642,18205732..18205836,18205931..18205981,18206252..18206286
,18206869..18206913,18207117..18207150

Expression

GEO Profiles:Os10g0476400

Genome Context

<gbrowseImage1> name=NC_008403:18204024..18207273 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18204024..18207273 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaccccttcgcgaagaagcccacgccgcgagaggcgatccggagcagcaaacgtgagctgacgaatgctaccagaggtattgagagagatattggaacgttgcagctagaggaaaagaggctagttgctgaaatcaaaaggactgcaaaaactggcaatgaggcagcaaccagaattctggcccgccagctgatcaggctaagacagcaaatttctaatttacaaggtagcagagctcagattaggggcattgcaacacatacacaggcaatgcatgccaacacttcagtggctgctggcatgcaaagtgcaagcaaagcaatgggagctttgaacaagcaaatggatccagccaaacagatgaaggtgatgcaagaattccaaaaacagtcagcacaaatggatatgacgaatgagatgatgtctgactccattgacaatatcttagacgatgatcaagctgaggaagaaactgaagaccttgcaaatcaggtcctggatgagattggtgttgatattgcctcacagttatcctcagctcctaaaggaaggattactggaaagaaggttcaagctgatgaaagttcagaattggacgaactcgagaagaggctggctgctctgaaaaatccatag</cdnaseq>

Protein Sequence

<aaseq>MNPFAKKPTPREAIRSSKRELTNATRGIERDIGTLQLEEKRLVA EIKRTAKTGNEAATRILARQLIRLRQQISNLQGSRAQIRGIATHTQAMHANTSVAAGM QSASKAMGALNKQMDPAKQMKVMQEFQKQSAQMDMTNEMMSDSIDNILDDDQAEEETE DLANQVLDEIGVDIASQLSSAPKGRITGKKVQADESSELDELEKRLAALKNP</aaseq>

Gene Sequence

<dnaseqindica>3036..3087#2496..2551#2370..2405#2156..2236#1966..2037#1632..1703#1438..1542#1293..1343#988..1022#361..405#124..157#ggggagaaaatccaataaactaaactccaccccccccccccccccaacgcggcttcccccaccgccatctcctccgctccctccccggcgacgagcaagcacaccgccggcgccgcggcggagatgaaccccttcgcgaagaagcccacgccgcgaggtgcgacgatcgtctcgttcctccccaccccccaactcgatccccgacgaccaaaaaattcgatcgaattcgcggcgcttagctcgaattcggattgatccgcctcgcttcggggggatccctagggggttgtttctattccgatcggtgtggtcgatgtgctccgagctctaattttgggcggtttttttttgactgtgcagaggcgatccggagcagcaaacgtgagctgacgaatgctaccagaggtgattggtttgatcgattcctttttttccagcacactcgttgttgtgccagagaagtaatcgtgtttttgctttacatatcgattacttctctggcacatatcgatctacatatgctaggctagctgcagttttgcttttgattcaattggtgttttggaacatatcgatctacatatgctaggctagctgcagttttgcttctagtgcgtgttgaatcaaaagctggctcgctgcatccatttatttctgatcgtcgctataagggttaaatgcagcttttctgtggggatagcatattgctttaagtaagctgtgttgttgatttgggatgtttgctggaaaatgttttgagattttgaggagttgatgttattgttaccaaacttaaactgaaacatgcatgaaacgtgaataagttggtatagggaaatctaatctagggctagttatcaaccacgaggatttgatggttgaggaggctgccttgaactacttgctctccttgaaattaaatatggacagttcctcctgcatattctcgtttctggagaatctaatttgttggcatttcatctgaaggtattgagagagatattggaacgttgcagctagaggtatgcatctgtagccacaccccttaagttgtctaactaatgagaaaaaatgcctagaatatttgctagtttgtaaatagtcttgtgtgttcagattcatctgagaatttgttttgcattgaaacgaaaccaagtttttataagctgagatgtatgcttaatcaattcactgtcaataatatgtcttatcattgtcaatcttaacatggaatttttaggatgaaaattgaatcagtagcatcactagtttatttttttttcaatcaacaggaaaagaggctagttgctgaaatcaaaaggactgcaaaaactggcaatgaggtctttgttcttatgtttcagtttcagcacaataattttggtctcagatcatacggtggctcatatctttttgtgatttccatctcttttataggcagcaaccagaattctggcccgccagctgatcaggctaagacagcaaatttctaatttacaaggtagcagagctcagattaggggcattgcaacacatacacaggtgaaatgtttgtttcccctttttgcttctttcgttccaacataacggggttaacattttttatcttttatgttgaattttgtccataggcaatgcatgccaacacttcagtggctgctggcatgcaaagtgcaagcaaagcaatgggagctttgaacaaggtaataacacaccaagattatgtgcatcggacatcattatagcacaaacttgaatattcaagtatggagtttatacaagaaccaacttaatattaatctttctcttgtgtcctccatatgttattaacttcttttcagtgcaattgaattttgacctgtgctgctcgatacttctgaatttaacctgggttgcctgatatgactttaatacatgtcttctaatgagtatgactttttcatctcattttgtttttatttgcagcaaatggatccagccaaacagatgaaggtgatgcaagaattccaaaaacagtcagcacaaatggatatgacggtactcttaactttctatgttcttaacagctttggttgtttgttgtaagacaaaattaaacggtgatagcacctgtatgtagaaagttatgcattgactttctttattctttgagcagaatgagatgatgtctgactccattgacaatatcttagacgatgatcaagctgaggaagaaactgaagaccttgcaaatcaggtcattttcaattcctatttccagaccaaattgctagaatctttttgaaatgctacccttccgtctttttccccttccataagccctatgccttgaatttgatttttcatcatttcttgtctatgttttttaggtcctggatgagattggtgttgatattgcctcacaggtagttgaagttactatctcagttctttagtctgttttcttttcttttttaggtagttttagttttttcttatccttttcctcttcacagttatcctcagctcctaaaggaaggattactggaaagaaggttcaagctgatgaaaggtacgctggatccaggattttgaccatcttgtttgtttgccatcttgtttgtttgcttaactttgtctttccttttcccctttataaggacttagagttactgtattttcccactctatactgctatgactagttagatccctactgattttttgtttgccattggtaaaaagaattaatagatcgtataaaaatcaatagctatgtgtcgcgacagacttagaaaactctagttatcatcaaatcagcgtgtgtgctagttttcgaattttagaacatgtgtctcttgattgtattcatggtattctaatgtgattcgttataagctgatacaacgaagtcatcaccaaccattatgtattagtagctttcagatatatctgaaccgagtgtagaatcattgcttcccagacacctgcatatctattcgcctatttattcatgattttccactttgttgactctatgatttcctcgtgtacagttcagaattggacgaactcgagaagaggctggctgctctgaaaaatccatagaagagggaacttctctgtaacccaacattttacacaaagacctgctctgtacctacatttcaaattcgtgatacgaaacaaaatagtacatttgcacctgtaaatatcggatggttgatacttcaactatgtgaagatggatgtgtatcaacctgacaagccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0476400, RefSeq:Os10g0476400