Os01g0253200

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0253200| Description = Pectinesterase inhibitor domain containing protein| Version = NM_001049145.2 GI:297596454 GeneID:4327116| Length = 7...")
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Gene Name

Os01g0253200

Description

Pectinesterase inhibitor domain containing protein

Version

NM_001049145.2 GI:297596454 GeneID:4327116

Length

733 bp

Definition

Oryza sativa Japonica Group Os01g0253200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8379033..8379765

Sequence Coding Region

8379033..8379529,8379744..8379765

Expression

GEO Profiles:Os01g0253200

Genome Context

<gbrowseImage1> name=NC_008394:8379033..8379765 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8379033..8379765 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagatcactggcgcacgcgacgctgctcctcgtcgttgccgtcgtggcggcggcggcctgctggaccacggcggccggcgagaacgaggaggtggcggagatatgcaagaagacgtcgtacccggaggtgtgcattgccacagcggggaagcaggcgtccaagtacggcgccgccgtggacccgctggcggtgctcaacatgcaggtggacgcgttcgcgctgcgcacggaggcggcgcggaagcacctgacggaggcggtgaagacggcgacgccgaaggcggcgaaggcgctggacctgtgcgacagcctgtacctggacgtcgaggacaacctcggcgcggcgcggcgcgccatcgggttcaaggacgccgtcaccatccgcgccatgatgggcatggcggcgcaggacatgcagggctgcgacgagcagttcaggaaggtcggcgagaagaaccccatggaccacttcaaccggtccctcctcgagattgaaaaatgtgttaacttgtaa</cdnaseq>

Protein Sequence

<aaseq>MARSLAHATLLLVVAVVAAAACWTTAAGENEEVAEICKKTSYPE VCIATAGKQASKYGAAVDPLAVLNMQVDAFALRTEAARKHLTEAVKTATPKAAKALDL CDSLYLDVEDNLGAARRAIGFKDAVTIRAMMGMAAQDMQGCDEQFRKVGEKNPMDHFN RSLLEIEKCVNL</aaseq>

Gene Sequence

<dnaseqindica>1..497#712..733#atggcgagatcactggcgcacgcgacgctgctcctcgtcgttgccgtcgtggcggcggcggcctgctggaccacggcggccggcgagaacgaggaggtggcggagatatgcaagaagacgtcgtacccggaggtgtgcattgccacagcggggaagcaggcgtccaagtacggcgccgccgtggacccgctggcggtgctcaacatgcaggtggacgcgttcgcgctgcgcacggaggcggcgcggaagcacctgacggaggcggtgaagacggcgacgccgaaggcggcgaaggcgctggacctgtgcgacagcctgtacctggacgtcgaggacaacctcggcgcggcgcggcgcgccatcgggttcaaggacgccgtcaccatccgcgccatgatgggcatggcggcgcaggacatgcagggctgcgacgagcagttcaggaaggtcggcgagaagaaccccatggaccacttcaaccggtccctcctcgagatgtccgagatctgccgctccctctccaacatgatctgatcgatcgctctcgccgcccgccaccgtgccggcgcgcgcaccgcgcacgcgtgccgccggccggcgaccctttgcgtgagagcgagcaagcgcgctccagcagcgctggtgattgaagcttctctttttaatttgttttctttcgcttctttttttttaacgatcttgttttcttagtgaaaaatgtgttaacttgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0253200, RefSeq:Os01g0253200