Os09g0280600

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0280600| Description = Mnd1 family protein| Version = NM_001069301.1 GI:115478341 GeneID:4346611| Length = 5375 bp| Definition = Oryza sat...")
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Gene Name

Os09g0280600

Description

Mnd1 family protein

Version

NM_001069301.1 GI:115478341 GeneID:4346611

Length

5375 bp

Definition

Oryza sativa Japonica Group Os09g0280600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6500847..6506221

Sequence Coding Region

6501043..6501078,6502947..6503026,6503125..6503169,6503373..6503424,6503508..6503570
,6503641..6503748,6504328..6504366,6504650..6504766,6505398..6505478
,6506128..6506130

Expression

GEO Profiles:Os09g0280600

Genome Context

<gbrowseImage1> name=NC_008402:6500847..6506221 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6500847..6506221 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagaagaggggtctttctttggaggagaagagggagcagatgctacaaatattttatgacagtcaagacttctatctgcttaaagagcttgagaagttgggtcccaaaaagggtgtcatcagtcagtcagtgaaggatgttgtgcaaagcctggtggatgatgatcttgtcttgaaagataaaatagggacttcagtgtacttttggagtcttcccagctgtgctggaaatcagctgaggactacttacagcaaactggaatctgatctttcaagctctaaaaagcgcttcatagagcttgttgagcagagagagaatttgaaaagaggcagagaggactctgatgagagagaagctgctttggaggagctgaaggctgtagagcaacaccacaagaagttaaaggaggaactggctgcttatgctgatagtgatccagcagcactagaggcaatgaatgatgctattgaggttgctcatgcggcagctaacagatggacagacaatatcttcactctgcaacagtggtgttcgaccactttcccacaagcaaaagaacaactcgaacacatgtacagggaggtggggataactgaagatttcgaatatctgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MSKKRGLSLEEKREQMLQIFYDSQDFYLLKELEKLGPKKGVISQ SVKDVVQSLVDDDLVLKDKIGTSVYFWSLPSCAGNQLRTTYSKLESDLSSSKKRFIEL VEQRENLKRGREDSDEREAALEELKAVEQHHKKLKEELAAYADSDPAALEAMNDAIEV AHAAANRWTDNIFTLQQWCSTTFPQAKEQLEHMYREVGITEDFEYLQ</aaseq>

Gene Sequence

<dnaseqindica>5144..5179#3196..3275#3053..3097#2798..2849#2652..2714#2474..2581#1856..1894#1456..1572#744..824#92..94#gctccttgcgccgccaacgccaagacgagtggcggctgaacaggggaggggcggcgatctctatctggcgagcagagcaggggagaggatcatggtgagcatccacatcctctttctctgattcatctctctctctctctttcccatcgggactacttttgtctggaatttgcttgcgttcattcgttaaccctagcttctcttctagatctggaagaagctcttctcctccttaatttgagagccttaaacctctcttaatacacgtagtaacagtttgtttgttccccgaaaagtttcccaagttggatccgcccctgacagatagatatatatgttcatgttgtaaatgatagtgaggtatctgttgcggggggaaccagggtttctataccacggtcttgatgcatgtcagatgtttattgaaatgctggtaggtggatctttacagtgctgctgaaatgtgatggaattgtattctacgcgacttaatttgtcttgtcattcgaatatgttttacatcatgccatattgccatccactaaaaatgtctgaatgaagaaacagccataagaaatataactgatcttaagatgtttaaagcctacaatgctactcttgctaactgatagttccattaagttattttggtccatgagcacagaaattttcttctatttagtatttagcaaccacctttgtttagtttaatttctaactgttgctctccatatggtgcttagtcgaagaagaggggtctttctttggaggagaagagggagcagatgctacaaatattttatgacagtcaagacttctatctggtaagttcttctgtcaagatttcatgatatctgccctaggattgccgtattagctgtttgcaagttatctgtaacaaattcaagggttatgttgtttcttctgctaatgtggaggcactggtttgcagatgtcccagtagctcttttcattcctttctgctgctgcattattatgctttataatgtaggcgaataaatgaaaccaatcagcgcccaagtgccaatctaatactgtgatttgtttccagtttcttcttttttggtttgggtttgtaaagttgacatggcaatgcttcgttatatgtatgcaggaaaagtcattatctgttccaatttgtagtaaaactaactaatcatcaattttcagaactaatcctcggatatacaattatgcaactattaatgctagtgcaagcatacacccatatattagtgccagcaggttgaggttttgatgcatttgtatttctgttactacaaatttagggtcagatgctcatactggtcattattatgtatttctgttgtttgcccatgccatacattgctattctaagcgctgttctgctaggtttctgagtagactatattttcatatgtcctaagtcccaatccatacttctgctttcagcttaaagagcttgagaagttgggtcccaaaaagggtgtcatcagtcagtcagtgaaggatgttgtgcaaagcctggtggatgatgatcttgtcttgaaagataaaatagggacttcagtaagtgtagctgcttatctaaattgtgccatggacctagatttgtcaaactgctttctcagtaatggagccttgtcatataatgtttttcatcaaagttgatgcatctgtaactcaagaaaggtttcttttgtgtattcttcaagagctagtgcactgagtttcatgtagctacattctgcatgttttgcaaagggccagttcttagttaattttttgtttacatatcctcaccgatgtgccttttgcgtttggtttctcaaactaaatagtttccttacaggtgtacttttggagtcttcccagctgtgctggaaatcaggtatttttttataccattactaccccctttaaccttgcatgtgtcaattctcatgtctgattttatttattcggtgataacatggcacaaattcggtaccaagagttagatcccctgaccatattttttttttcctaatgacaattggtaacacgagtaaaagtaagcaagctagacggcacactctgtcctttaaattcttcttacaggtttgcgaagaacaaaatactttttatgttaattttctgagtatatagtgtggtgctggctccatgtattagtatcacaactagcttttgaagctttgcagaagagagtattaactgccatgaatcattcctattagtgcagcataccctagtggtttgagaatcaggataatatacaggtaagaagagcttttgtttactcatcaagatagaggcaagcaaagagggattttcgtcattttgttgatcacttggataaatgcagcaactagtaatatatttcttattgcaacttttagtgcacattaataccttcatttgtcattacttgtcatagtttaagctaatccatctatggatctgtttgtagctgaggactacttacagcaaactggaatctgatctttcaagctctaaaaagcgcttcatagagcttgttgagcagagagagaatttgaaaagaggcagagaggactctgtaagtaattgtgcattttcctacaaccttatgacaaaaatgtaaatccaattcatatacactgatctaggatgagagagaagctgctttggaggagctgaaggctgtagagcaacaccacaagaagttaaaggtgtattcacagtcttgtcttttatttaatttatcttttccatttaggtatctacaactcaattgtttcgcattgtttttcaggaggaactggctgcttatgctgatagtgatccagcagcactagaggcaatgagtatggcataccgcatcccttttttgtttctatttacgcctttgcatgtctgttatctgatgatacaatcaatgtgaaattgtcaattactttccatgtagcatctctttttcatccaagtttagcagcaacttaacattgcttaggacattccctgcacaaaattgttccacaatttaactactgtaaaatggtaattacagatgatgctattgaggttgctcatgcggcagctaacagatggacaggtatcggtggtcttgctagtcacattccctatatatttatatgtctgcagcttgtttatcatcagaacaggctaacggaattctgaatgtaactacagacaatatcttcactctgcaacagtggtgttcgaccactttcccacaagcaaaagaacaactcgaacacatgtacagggaggtaggttctgtcctcttacccatccattttctttcttataatatcatccatcgcttcaataatacatatccaaatgataaaatcttagcatgttttttccaatgaatatctgacagactggtcatttgcaagagatgttttcctatattactgagtgatatattcagttataacctgcatatttaaagaagaacctaggtggtaataacaaaaaaattatgttctgtacataaaaattcagattgatgaagtctgcaacagtctgtcctgttcaaacctgacagtaggccatccatatcaggcatcaagccatgaatgacaaatcaattctggacatttgttagtatctggtcaccaatcatgtactgatcggtcaactattttacgattattatagtttattagcattactgacccacaacctggccatctgagtacttgttgcgtatctttagactagatcatatataaaaaataacttaaattctgtcatacttaactgaggatattgaaattagagagaaaacagtgatagcatttcgcaacttaacttttgggttcccattgtagaactaaagatccagagatctaagctttggtgaatcagttgttagtaataattgctgcatggatgtgatcattaattagtttgtattggtcctcaaatggcgtaagaaaaaaaatattcaaagggtctatgaaccttcaaacagcctcattaaatgcagcaagcattttatcatgtatgcatgctgtactatattcttttctgtagttctgttaggtcctgtttcagttagtcaagcactatatatcttttccttgtctaagatcttacatattggtattggatgcattttttgtaataatgttgttttaagggtatgagcattttgaggccatgctgatgatgttatttaaaaagcttgcacttgtttgctgtttggactctatactgataagcctaaatcatgtccatctgttttgattagttcttggtgctatttgtcttctcttagctatcataccaaacttgttattctagttacttctgggattgattataatatccacatgagtacaatatttcttcatgttgtaagttatgctaagcgccctcaataaggatatccctcaaacttccttggcttgaatggtcactaaattgcaagggagcaaagccattgcccagtagaacacttctacacttcatgtgtctggcttgagtgatcataccccaacggcccaacccagtcactttccatatcaggactcaaaagcttgtcattctctcgggttgatagaagtgttctagaaatattgatatctttgtgagtgatgatccaatagtttagcttttgctgtgattagttcccttcaaacttccaacttttccgatcacatcaaatgtttggacacatgcatggagcattaaatgtggacgtaaaaaaaaccaattgcacagtttgcatgtaaattgcgagacgaatcttttgagccttattacgccatgagttgacaatgtggtgctacagtaaacatttgctaatgacggattaattaggcttaatagattcgtctcgcagtttacagccggaatctgtaatttgttttgttattagtttacgtttaatacttcaaatgtgtatccgtatacgtcaaattttttttgccaaaacaactaaacacggcctttgtccactccacatcaccacaactaaagtttcacatatgttgtgctgctggttttttgagcatccccaatgcttttccttcacgctagtaccctctgtttgtgtaacaaggcgttttcacttctcatagtttcctctgttctcatgttctgatttactcttgtgaaatttcaggtggggataactgaagatttcgaatatctgcagtaatgcataacatcctggttgccctgttacaaaaccgtatgtaacccaactcagcaaatctagagtagttcacctggaatctgtagaagtttattcatacccatgttagcaatcttacagtaaatgatcccaatatgctccatattttctgctttgtaagtaaggtacctatggaatgctgtcagaaaaacagttctct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0280600, RefSeq:Os09g0280600