Os10g0476500

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0476500| Description = Conserved hypothetical protein| Version = NM_001071384.1 GI:115482511 GeneID:4348892| Length = 1678 bp| Definition ...")
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Gene Name

Os10g0476500

Description

Conserved hypothetical protein

Version

NM_001071384.1 GI:115482511 GeneID:4348892

Length

1678 bp

Definition

Oryza sativa Japonica Group Os10g0476500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18208851..18210528

Sequence Coding Region

18209168..18209329,18209423..18210460

Expression

GEO Profiles:Os10g0476500

Genome Context

<gbrowseImage1> name=NC_008403:18208851..18210528 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18208851..18210528 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggccgccgcctccctctccctcttccgcacgccgcaggcgcaccacctcgccgagctccgcgtcgacggcgccgaccagtcgccggtcgccttctccgacccctgcgccgtcggccgcaagcgccgctgcctcttcccgcccttctccccgcgcaagaggatgctgctggagctcccgcccttcgcctccacgccgaccgcgcccgcgccggggagcgcctccccgggggctctctcgtcggggggtgatcggtcgacgaggaccggcgggagcggaggcggaggcggaggcggtgggggttcgtcgttctccgctatggcggagagggtgttggcgccgccatcggtgtccagcgggagcggcgccgcgttcgcgttcgcgttcttggccgcgtcgccgaagcagcagcagccgttgacgcccatgggatccaccgccagctgcggcggcgcgggatccgggttcttgccccctgatccgtcgtcgtcgctcacccccatgggctccaagtccaacggcattggcgcctccgcgttcttggcttccccgaggccggcgaccaggagcgccaacgatgggggcggattcgcgttcttccgttcgccggagccagagcgcaccgccggcgacaccacccgcagcggtgccccgttctcggctcctccgaatctggtgtccgggccggctggttccccagcgtctgcggcggctaaggagccatctcagattatcggcgatggtggtctcgtcgcgccgccgtacaccatctcgtcgtcgccggcgcggaagtcccggagcagcaccctctggtcacgccgcctcgcccacgccgcagccgagggccgtacgagcccgcagccgccgcgcgacgagcagctgcagatcaccctgccgccgccgccgcagaaggtcaccaagacggtactagccccggccaccggcgagccctcccgtggcgccaccctgtcctcgtcggcggccaccacgtgctgcacgttcctcacctcgccggcgaaggcgaccaaccaggagcgggaggcgcgagcgtcctccaggatgggcggcggagagggcgccaccaccgcggcggcggcggcggcggcggtggcctgcgccggcggcgaggtggtggtgagcgtgacctgctcgtgcggcgcccgggaggagttctgcttcgaccactgccattga</cdnaseq>

Protein Sequence

<aaseq>MEVAAASLSLFRTPQAHHLAELRVDGADQSPVAFSDPCAVGRKR RCLFPPFSPRKRMLLELPPFASTPTAPAPGSASPGALSSGGDRSTRTGGSGGGGGGGG GSSFSAMAERVLAPPSVSSGSGAAFAFAFLAASPKQQQPLTPMGSTASCGGAGSGFLP PDPSSSLTPMGSKSNGIGASAFLASPRPATRSANDGGGFAFFRSPEPERTAGDTTRSG APFSAPPNLVSGPAGSPASAAAKEPSQIIGDGGLVAPPYTISSSPARKSRSSTLWSRR LAHAAAEGRTSPQPPRDEQLQITLPPPPQKVTKTVLAPATGEPSRGATLSSSAATTCC TFLTSPAKATNQEREARASSRMGGGEGATTAAAAAAAVACAGGEVVVSVTCSCGAREE FCFDHCH</aaseq>

Gene Sequence

<dnaseqindica>1200..1361#69..1106#aacaactaacccaacaacctgaggaggaggcagccgcgagcgcgagccaagagagcacccagctagccatggaggtggccgccgcctccctctccctcttccgcacgccgcaggcgcaccacctcgccgagctccgcgtcgacggcgccgaccagtcgccggtcgccttctccgacccctgcgccgtcggccgcaagcgccgctgcctcttcccgcccttctccccgcgcaagaggatgctgctggagctcccgcccttcgcctccacgccgaccgcgcccgcgccggggagcgcctccccgggggctctctcgtcggggggtgatcggtcgacgaggaccggcgggagcggaggcggaggcggaggcggtgggggttcgtcgttctccgctatggcggagagggtgttggcgccgccatcggtgtccagcgggagcggcgccgcgttcgcgttcgcgttcttggccgcgtcgccgaagcagcagcagccgttgacgcccatgggatccaccgccagctgcggcggcgcgggatccgggttcttgccccctgatccgtcgtcgtcgctcacccccatgggctccaagtccaacggcattggcgcctccgcgttcttggcttccccgaggccggcgaccaggagcgccaacgatgggggcggattcgcgttcttccgttcgccggagccagagcgcaccgccggcgacaccacccgcagcggtgccccgttctcggctcctccgaatctggtgtccgggccggctggttccccagcgtctgcggcggctaaggagccatctcagattatcggcgatggtggtctcgtcgcgccgccgtacaccatctcgtcgtcgccggcgcggaagtcccggagcagcaccctctggtcacgccgcctcgcccacgccgcagccgagggccgtacgagcccgcagccgccgcgcgacgagcagctgcagatcaccctgccgccgccgccgcagaaggtcaccaagacggtactagccccggccaccggcgagccctcccgtggcgccaccctgtcctcgtcggcggccaccacgtgctgcacgttcctcacctcgccggcgaaggcgaccaaccaggttcgaatcgtctgcaccgatctcctctttctatcccccctgttcttgaatcttgattgctccacacgtcgccgttctcttgcccatctccaggagcgggaggcgcgagcgtcctccaggatgggcggcggagagggcgccaccaccgcggcggcggcggcggcggcggtggcctgcgccggcggcgaggtggtggtgagcgtgacctgctcgtgcggcgcccgggaggagttctgcttcgaccactgccattgacactgccacatcctcgccgtcgattgcacttggccgacagatggcgtgatctcatcgctccatttctgatgtgatatgctcttctttggttctctcgtctagttctctgctagtgtctctgttctgtgaaaacttcagattcggttgaactgaacagtttcatcagtgtttcttatttctgagatgaaagtttctcatgtttcatagggtttgtttagttcgaacttcaaatcttggtggtttgtggtgattttaagaaaaaaaaataaggaatgtttttggatgcctgatttagtgaatcctggtggttcaaaccg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0476500, RefSeq:Os10g0476500