Os01g0254000

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0254000| Description = Similar to NTGB2 (Fragment)| Version = NM_001049150.1 GI:115435713 GeneID:4327708| Length = 5016 bp| Definition = O...")
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Gene Name

Os01g0254000

Description

Similar to NTGB2 (Fragment)

Version

NM_001049150.1 GI:115435713 GeneID:4327708

Length

5016 bp

Definition

Oryza sativa Japonica Group Os01g0254000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8412824..8417839

Sequence Coding Region

8413249..8413569,8417452..8417583,8417664..8417792

Expression

GEO Profiles:Os01g0254000

Genome Context

<gbrowseImage1> name=NC_008394:8412824..8417839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8412824..8417839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcctggttgactggttctacggggtgctggcctcgctggggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctcaaggacgagcggctcgtgcagcaccagccgacgcagtacccgacgtcggaggagctgagcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtcgatgctgttgtttacttggtggatgccgctgacaaggaacggtttgcggagtcgaagaaggaactcgatgccctccttgcagacgattccctagcaaccgtgcctttcctgatactgggaaacaagatcgacatcccatacgccgcgtcggaggaggaactccgctactaccttggtctgagcaacttcaccaccggtaagggcaacgtgaacctagccgactccaacgtgcggcctctggagatcttcatgtgcagcgtcgtccgcaagatgggctacggcgaaggcttcaaatggatgtcccagtacatcaaatga</cdnaseq>

Protein Sequence

<aaseq>MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDER LVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAADKER FAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNL ADSNVRPLEIFMCSVVRKMGYGEGFKWMSQYIK</aaseq>

Gene Sequence

<dnaseqindica>4271..4591#257..388#48..176#gaggcggcggcggcgaccgatctgtgcggggagggggatcgccggagatgttcctggttgactggttctacggggtgctggcctcgctggggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctcaaggacgaggtaggtcgcccggatcgatcgatcgatcgagatttgtactgatttggttggttctgatttgtgttgggatttgggtgcagcggctcgtgcagcaccagccgacgcagtacccgacgtcggaggagctgagcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtttaccttcagttctaattctactgctcctatatctttgttacttgctgttagatttgttccttgtgcgatggatgggaagcagcgcttgtttgattggaacgaactagggttttaggcatgagggtatcggggattagacatgatgcatatgagtagatgaagaatcggtcgtcttgctcacttcatgggcagggatttggtggtttaattcagtaccgattgctctttttggatcttgcagaggaaaaaaaatcccctgattgagcaattggatgtgttgctggtgcttgtactcaatttagccatgagctccagcattcagattagttataataaggaaaaattggttctatgccatcgaaagttttcaatgggttgtcttgtgaacatacaagctggacaaaaggttgcacatagtacttttttcggtaaacttggcctgtttgtttcagcttagtcttattaccttctgcgtataagctggccttttgatttttgcagtttatgaagacctgcaaatttgagggtagtgtaataactctagtccataaaaaccaaaatgatgctaaaaaaatctagctttttgcttattagtgcttgtgttatgacttaaaaaaaggatgatgaactgttcgtttgctacacaaaatatgtattagcatcagttttttttttaattattgttctcttgttctttttcaaaacaaaaaaggcatgttcactataaaaaaaaagtgaattgctcatgttccgctgtgtttggagagcttttccaaatgtatgattgatgcttcctagttgaccaacataccaccaaagactatgaagcctggttaccactgctaataacgctggtacacaggctgaactgcagttttcggtggtatgttggcaatgtaggaagtctgagtgatatatctgcaaggttgtccagacatactggtcgatagtcaatttccactaaaaaagtcagagccttgccaaacaaagcatataagggtttaacaaacagaacaaatttacaccgactatgggttgtttattatccaattttaattgttcttgtgttcttcttttcccgaagaaagcactgacaacaaaagtttgaaattgtccatgtaccactatatttagagaactttccaaatgtatgcctcatacttcctcattgaccaatataccacaaaacactacaatgttggcctctttaccactatcaagacacttctcccagtccattttgtctgttgagcatcaggacattaataagtgtggagtgccttgctctacatcatcctctgtaaacagtctggggttgcagttttatgtggtatgttggcaatgtaggaagtctgaatcgtatatttgcaaggttgtccaaacatacttgtctgtaggcaatttctcagctaaaaaaattgaagtcttgaaattatctataattttgtcctctatatgtgcttaaaacttgctgagttcacatgccagttttttatgaaagctccctcgtgccaacaacaaggcaaatgaattagtttgcgtatattgctgcgatcaagggtactgtacattatgttgacctttacttaatctgcacaaattgtcatattttgtttcctttctgggagtatttcatggcttagctactattatagatggtaagtatgtttaaccaattttgaccaaccatatctgtcatatcaatcttgaactttagtgcttgaatagtttggagcatgatttccatcttcctctaagagtcctctttgaaaagataatgcgtcactttctcaggtttcaaacttcttcctctctagtccacaaaatgcctttcaaatttctgcagaaacacgttagaccaagcagttcacaagtttcaacaaatagaacaacttcataccgatcttgattattctcatgttcttttttccaaagaaagcatgtgaaccataataatttgggggattgtcggcatacctggagaactttccgaatatattactcatgcttcgcagttgatcaacataccaccaaaggacgggtgttggcctgtttaccgctgttgaggcaatttttcctcgtattttctggcaagaatcaggacatcgatgagtgccttattctacatgaatctcgggcaaacaggctttggctatagtttcagtggtatgttggaaatttaggaagtctgagtggtatatctgcaaggttgtccagacatgctggtctcttgcaatttccgctaaaaatgtagaaatgtaggagcctggccagatgaagcctaagggtggactggcttaaagaaaagaacataagtttcaacaacagtacaaatttgcaccggctatggattgttagcatcagtgatcagtctttgactatgttagcgttcttctccaaaaggaagtattcacaatgaaaatttggaattgtccatgtaccactatgtttggagaacttcccaaatgtatgactcatgcttccatgttgaccaacataccaccaaaatattatgatgttcgcatgttgccctgtttaccactattaatcaagacactccccctcctctcttttgttttcctggtgaacatcaatatattggtaaacaggctaaggttgtaattttctgtggtatgttggcaatgtaggaagtctgaatggtatatctgcaaggttgtccagatgtactgggctgtaggcaattctggcttgccagctgaaaatgtagaaggcttgatctaatatatgattttgtcctttgtactgtccttgcttgaaacttctaattcacatgccgattttctttacatgcaaactcaccctttcttaaaacttctaattcacatgctgattttctttacatgcaaactcatctttcttaaaactggactaattcacattctggttttacatgggcaatttgccttttttttttattccctgctgggaatttttccagcttagctattatcatgtattgcaagcatgtttaacaagtttgagaaaccatatctatatgtaacattgtcatatcaatcatgaacttgatgtgttgtatgatcacaatttatagtgtataattatcaaggtatatacgtgacgaacacttcatggactcttttggcactgagatctgtgcaaattgattcttaaagtcaagtctgattaactactggggccactagtatgtgttatgatacctttagggtgcagggaaattatgcacgtgtcacgatattgatggcaacagtatcttccagagttcagttcttgctttaagtcctgtttgggtctcctggcgcagtttacaaatgaggaaactgtggttatggggtgccaacattttaactgtggtgttacgagatgctcttaatatgatttctataccattggcatcttgctgtcagagaaacaaagatatggggaaaatcgaatgttggcagtgcagtcatggactagtgagaatgggctggggaaccttcattttaagcctttatgtcccccatgaataatttactggaacacattttgtctacaattgctccaaatgtttggaatgcatcttttcaagccaatgtctgtatgactgacgtggtttcaaccattctgccctgcaataggccagaaggaagttgcaccatcaagctgaccaccaattctgtggggaaaaggaaatcctaattcgatgactacatgttctcaatcgcgagatgcaaaatgcttcttgttttgcgaaattcacatttggcctgtagtggagtagactcgattcttcatattttgtaactcgaggagtcattacttgttagactatccacctggaatttggtgacttaactttctgtattggctgtttttaattcctgttttgtttggtaggtcgatgctgttgtttacttggtggatgccgctgacaaggaacggtttgcggagtcgaagaaggaactcgatgccctccttgcagacgattccctagcaaccgtgcctttcctgatactgggaaacaagatcgacatcccatacgccgcgtcggaggaggaactccgctactaccttggtctgagcaacttcaccaccggtaagggcaacgtgaacctagccgactccaacgtgcggcctctggagatcttcatgtgcagcgtcgtccgcaagatgggctacggcgaaggcttcaaatggatgtcccagtacatcaaatgagaggggcttctgctcctcaattgtcaatagcagctgctgctcctgctgtccacagtgggagtgggtaattcaggcctctggttctgtttatcaactctcctgatgctttggagaaacctactgcacctgtaaggaaaaaagtttgtcgtagtggtggatagtgaatgcctgtaagttggtgttaatactagaaatatgacggggtttatttgtttgattgtttatgggtggtgtgaccttattagctagaaaatgtgggttgctggaatcgtttcttgacaacaggaaatgtttcagccaatgtattcacgctatctatctagccagtgatatgtgtatgagcaacttcggtctcttggctgctaacgtctcccctgtgatacttgatcaaaactctttttttttttaagataatggattaaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0254000, RefSeq:Os01g0254000