Os01g0254800

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Revision as of 04:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0254800| Description = Conserved hypothetical protein| Version = NM_001049154.1 GI:115435721 GeneID:4327712| Length = 3098 bp| Definition ...")
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Gene Name

Os01g0254800

Description

Conserved hypothetical protein

Version

NM_001049154.1 GI:115435721 GeneID:4327712

Length

3098 bp

Definition

Oryza sativa Japonica Group Os01g0254800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8465242..8468339

Sequence Coding Region

8465292..8465422,8466774..8466948,8467867..8468313

Expression

GEO Profiles:Os01g0254800

Genome Context

<gbrowseImage1> name=NC_008394:8465242..8468339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8465242..8468339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctctccctctcacgcggcaccaccgccgtcgttgccgccctcgactgccgcagctccgccgtcgtcgcatccgtcgtctcgccgccaccgatccccgcgccaccaccgtcgccgccgccctcgactgccgccactccgccgtcacccatcgtcgcatccgtcgtcgccgccgccctcgactgccgccgctccgccgtcgtcgcatccgtcgtcgccgccaccctcgactgccgccgctccgccttcgtcgcatccgtcgtctcgccgccaccgatccccgccgccggctcgccctcaaccaatccccatcaccgtcgtcgcatccgtcgtcgtccaggatttacgtcaccgttccgtcaccgcacccacacgatgatccccggcgacggaacgggtcatggtggccttggaggatactcgggcccgacgagctctcggcgtctcagcgctcctccctcttgctccgatctggccttagtgatgccgccctgttttcgcggttgatcccggcaccagccccttcctctggccgcgtgcgagttcgagattccaagtcccggtggtcggatttctcaaccccggcactggcctcgcacaggctgcgatccgctcgccaacaaggcttgtgtagagaagaaaaggtggaattgtggaaggtaatcgcggggagttttggttcattttttgaagatttctctaattggtacgtactaattaaccaattggagttttggtctcgttactcactgtaa</cdnaseq>

Protein Sequence

<aaseq>SLPLTRHHRRRCRPRLPQLRRRRIRRLAATDPRATTVAAALDCR HSAVTHRRIRRRRRPRLPPLRRRRIRRRRHPRLPPLRLRRIRRLAATDPRRRLALNQS PSPSSHPSSSRIYVTVPSPHPHDDPRRRNGSWWPWRILGPDELSASQRSSLLLRSGLS DAALFSRLIPAPAPSSGRVRVRDSKSRWSDFSTPALASHRLRSARQQGLCREEKVELW KVIAGSFGSFFEDFSNWYVLINQLEFWSRYSL</aaseq>

Gene Sequence

<dnaseqindica>2918..3048#1392..1566#27..473#aaccgcgcgccgctccccaaccctaatctctccctctcacgcggcaccaccgccgtcgttgccgccctcgactgccgcagctccgccgtcgtcgcatccgtcgtctcgccgccaccgatccccgcgccaccaccgtcgccgccgccctcgactgccgccactccgccgtcacccatcgtcgcatccgtcgtcgccgccgccctcgactgccgccgctccgccgtcgtcgcatccgtcgtcgccgccaccctcgactgccgccgctccgccttcgtcgcatccgtcgtctcgccgccaccgatccccgccgccggctcgccctcaaccaatccccatcaccgtcgtcgcatccgtcgtcgtccaggatttacgtcaccgttccgtcaccgcacccacacgatgatccccggcgacggaacgggtcatggtggccttggaggatactcgggcccgacgagctctcggcgtctcaggtaatgtcgccgaagacaagaactccggtcaagctcctcggccgtgaggacgcaagcgtgtgagtgtatcccttttccctcaaatttaattatgtactctgttacttagttctataattcatctgctcagttagtgtcccatcacaatcgcttggtcaggattgaatgttctgtggattggattgggagttgtttgctcaaggagcaattagggaatattttagttggttgcggctgcaaataccatcagaacaacaatggagtatttaacaagagccaacagccttttgtttcagatgaattccctctgaagtcacccgtcaattgactaatgttagacaatctaccatctagaggagatcattcctgaacccaatatggtgataagccgcctctgttgatgtgttacactcattgttacttgttctgaggtgtacaccttgcttgctatattggaagaatgaatttaattcacatggatataatattttgcaatttttgtatatgaaattatatgcatgttcttgtgatgtgagaaggttaaattcctttgtgggatgcccatttaatttctggttgctaattttactgaagaatgagagtaggttatgatgtcttgggttttgataagtagggtgtaaatttttatagtacaataaacatgcgtgctggtcattctgttatgtgggattgaaacaagtgatgctggcaattcaggtgcagaccagcttttggttctgtaaattattttctcaatttaaatagatcatgtattgtgatgatgcgaatataatattatgatgttatcatgtgttcaacagagcttaaaaaatactcacaaactggattctcgtagttatacagtttaaataagttataagcacgatttgggtttgatgtcttccatttgatttttagcgctcctccctcttgctccgatctggccttagtgatgccgccctgttttcgcggttgatcccggcaccagccccttcctctggccgcgtgcgagttcgagattccaagtcccggtggtcggatttctcaaccccggcactggcctcgcacaggctgcgatccgctcgccaacaaggtaagtcattattgggatgtttatatctgaaaatttagataatttcttttgaacttcattgcttggtcaacaacataacccaggaaaccaattaaattgatagacatgttgtgtgctctcttaagagatcaacatccaaattgacatccaagttaaaagaagaatttaattatctaaatcatgatgccaatattgagagcttcttttactttccgttgtatacattttctgtgatgtgtaccgaaggttatatacataatgagattttacttcaatggtggaattgtgctctattgaaccacatggaaagttctgatttgtgcagtgataatttttccctttaaaaagtcaaatttggtttacatttttattcatgacacctgaatatgtagaatgccatgcattagtaatgtgcaagcactttcaatgtattgtctaaactctaaaggaacaacttaccagtttattagtgaatttatgaaaaaaaaatcagatgtttaatgtctgaataaattcagattctcttctctgcttcatgccttcatcaggatgaggtagttagtgttgtactgtagttgacgaatcgatttgttcgcatcgtgataaggcgcagaaggtaaggcggaaattgccttggtttatcctctccccctaaatttcctctgctgcgattggttgattggttaatgaaaaacccaatacttgcaagcagattctgattagattcttaattattgggattttctagagttagtttaaggaaaagtgagttaattatcgacgatgaaatatacacttccatgattagaattatatatcgtatagacaaatatgtgtatgtattaaaaatatctgacaaattggactgtatgattataatgcctttcaaccattgctttgtgcaatgctcattatatctcccggaaattaatcgatttctgcttttgtaccatgtgcaatgtttacttttaaactgctcaggttcattctatcttattttctggtgcttctgaagcgatgtatatttcttcatttttaaactgctcaggttcatgaatgccaccatcactgaatgcacatctggtcctcccttattttcgttcgtatgtagtatgtacgtaagaactaacaagtttattcattcaaagaaaaactaacaagtttatgttaagcttcctttttaataatattttacattactgatatttagtgcagtgaaaaatgctgcaaatctctgatatttagtgcagtgcaaaaatgatacatagcttgattggatgctctttctcattatggccaactgcttgatggaattttttccatgtgaaaacaaatgtttactctgtttcaggcttgtgtagagaagaaaaggtggaattgtggaaggtaatcgcggggagttttggttcattttttgaagatttctctaattggtacgtactaattaaccaattggagttttggtctcgttactcactgtaaaaacatgatggtaaaaaaacagtttaatcctattggtactcttttatccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0254800, RefSeq:Os01g0254800