Os01g0254900
| Gene Name |
Os01g0254900 |
|---|---|
| Description |
Similar to Syntaxin 22 (AtSYP22) (AtVAM3) |
| Version |
NM_001049155.1 GI:115435723 GeneID:4327713 |
| Length |
3949 bp |
| Definition |
Oryza sativa Japonica Group Os01g0254900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:8474484..8478432 |
| Sequence Coding Region |
8474849..8474914,8475008..8475108,8475228..8475385,8475534..8475608,8476508..8476647 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:8474484..8478432 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:8474484..8478432 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcttccaggacctggaggcggggaacgcccgcgggctgccgcggaggggcggtggcggcagggcgggcgccgcggccgccggggcgggggcgtcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcggctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatacacaagacacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctgatcatcgtgtcgaagtcagcgccagcaaaaagattgctgatgcgaagctagcaaaggatttccaagcagttctgaaagaatttcagaaagctcaacggttagcggtagaaagagaagctgcttatgcacccttcatttctcaagcgggcttgccacaaagctataactcgagcgaggtgaacaatggtgctgataagttggctgagcaacgcacggcgcttctagaatcaagaaggcaagaattagtcttcttggataatgagatcgtgttcaatgaggccgtcattgaggagagggatcagggaatacaagaaattcagcaccaaattactgaagtaaatgaaatcttcaaagatcttgctgttctagtccacgatcaaggacaaatgattgatgacattgacacccatatcgagaatgctgttatagcgactacacaagcaaaaggccaactctctaaggctgctaaaactcagaagtcgaactcttcgctgatatgcttgttgctggttatattcggggtggtcctgctcatagtgataatcgtcctcgcagcctag</cdnaseq> |
| Protein Sequence |
<aaseq>MSFQDLEAGNARGLPRRGGGGRAGAAAAGAGASQAVASGVFQIN TAVSTFQRLVNTLGTPKDTPDLRERIHKTRQHITQLVKDTSEKLKQASEADHRVEVSA SKKIADAKLAKDFQAVLKEFQKAQRLAVEREAAYAPFISQAGLPQSYNSSEVNNGADK LAEQRTALLESRRQELVFLDNEIVFNEAVIEERDQGIQEIQHQITEVNEIFKDLAVLV HDQGQMIDDIDTHIENAVIATTQAKGQLSKAAKTQKSNSSLICLLLVIFGVVLLIVII VLAA</aaseq> |
| Gene Sequence |
<dnaseqindica>3519..3584#3325..3425#3048..3205#2825..2899#1786..1925#1076..1169#182..390#ccccaattccagacgccaacgcgaggtcgacgaaggccacgtctccgactccggctcgatttccaccccccccaaatcctcctccggcgagcggccggccgcgagacaccccggactctcccgcgcggcgattcttcggtaccccgatcggaggaggaggcggcggggagggaggaggaggatgagcttccaggacctggaggcggggaacgcccgcgggctgccgcggaggggcggtggcggcagggcgggcgccgcggccgccggggcgggggcgtcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcggctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatgtgaggctccccccgcgccatactctctacctaccccacgtctgtttggttttggtttgatttggagcgggggtcgggggatcgattttggttcgatttggagcgggggattgggggattttgcgatccggggctccgattttggatgcgcgtgatgaattttgggggggaattgtgcggctccgctgcatgatttgcgatctcgattaggttatatgtttatgcggtcgattcgcgtgatgaacctatgtctctcatattatgtgttgcttagggatcgcttctccccttctcttcgtgatatctctcttattacgtgttgcttaggattgcttctcccttctcttcgtgataattatgtattagtgataattagggattcaatttggggagccctgcctgtagtttatctactagcaactcatgtttgggtgatagccgctgaacttaggtagaattgatgaatcatgccattcctggtatatgaatagatccgatggcctcgaataagatgttttctccattcctttctactgaaattgattcaatttatgccatgtatggcctggcatgctgtcttatagtgtagtaacttgtattatgccttaaccctttttctgtactttagactagttatttttttggtttgatgggtcgatttactttctgttggtgttgcttgcagacacaagacacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctgatcatcgtgtcgaagtcagcgtaagtattctcttgcatctttgtccaagttgcttttttctcaaaacagaattggaactgtttctatcttgtatgtttgaaaccagaattatttcagtactcttcaccttttgcatcaaaatgaaatggaattgcaacatgtgatgctactttttgaaccagaaaaccttcaattttgacattttccttcaaagtacagaagagtgtaataatgcatattggtttggaaactgaacctacccagtccttatattctgactggaaacatcacttctaatttgggcattttttatctgtatcagtcttagttttgcctgactactgtgaacagtgatttgcctcagcacataaaacaaattgttttcttaaatactcaatatgctccagtcatgatattttcaagtgtgttgccatgccactggagaaataatctacaagcagattttagaatcatgtagagatcaaatgtagcatttgcatttcttatatgagctgctttatgtagtattgattgcctatgaatctatgatcattactattttaaggaacatttctatgttccatttttgctgatgtattacacaatgtgtgttgatgacctcgtttggaactacaggccagcaaaaagattgctgatgcgaagctagcaaaggatttccaagcagttctgaaagaatttcagaaagctcaacggttagcggtagaaagagaagctgcttatgcacccttcatttctcaagcgggcttgccacaaaggtagtttgctagtcagctggtgtacttctttctgtaaatacttgcttatttttcttcctggcatcttatgtttttgaacaaaagtgcacttactacaataatataattcatggcatattgtttatcattttcttggtagtgtactaatgctacagcatcctgttacattttacttactctgcagaataattttgttgcatactctctcttgaacaaataaattattctacgtcaagttttaaaaaaatttcatgaaaaaaatattttcagtttgactggacttaacactggattatgttttctgaggtaaatggaataataataacactggattagtgcttttaatctgccaagtgcttgatgaccctaatagttaatgccctggtttattccaacctaatacaataccttctggtgcgcatttacaggatgagcattcatatttgatcctatccaaatagttcgtattgctgttttgatctactgtagcgtataagtttctctgcctgttttacccttaaatatctagcgttttgttcatggtccactttctcagcccccaggccctagctttcaatatcataaattcattttctgactaaacttgcgatgaagtttgtcttattcatagaactcagaataataaaaccactttcaagtgtagcctgtcttcttgggtcttccaagtaaaacagcaaaacattattttcttaaaattatctccattcaatggtactttagatcattgcaaaattttgtacctcacattcattatatgttaattttctgtaataataataacaacatatttttgaggctggtctatgataatatattgtcaaagtttttccagtatgttgtcaacatatgagtaatctaggatggcttgttctttgcagctataactcgagcgaggtgaacaatggtgctgataagttggctgagcaacgcacggcgcttctagaatcaagaaggtgaattgatagtactatttggttatgctttggactatttgttttcgaacatttctataaagtattcacttgttttgaaatgaatgaacaaattcactcctttgcaaatgtgtgaacatgataacctcaatttttttctttactgtaggcaagaattagtcttcttggataatgagatcgtgttcaatgaggccgtcattgaggagagggatcagggaatacaagaaattcagcaccaaattactgaagtaaatgaaatcttcaaagatcttgctgttctagtccacgatcaaggacaaatgattggtatgtggtaccgttggggatgatagatgggattatgtgctatttgatacgttgaagcacgaggctgctcatatatctggtatgttatatctgattgtgtatctcctcctatactgcagatgacattgacacccatatcgagaatgctgttatagcgactacacaagcaaaaggccaactctctaaggctgctaaaactcagaagtcgaactcttcgctggtacttttagactcctttagcactcattaatatatttcactggcactcacttcaacatgtgaaacattgttcgattctcattttatgttgcagatatgcttgttgctggttatattcggggtggtcctgctcatagtgataatcgtcctcgcagcctaggcagcagcctggaagaacatgggactcctagatctggttgagcttagagcgaagtattccttcctgatttaattttgctgtgaagtcgggaatgtatcctgatctcctgcctggaggagggggttgcgttctggtcttgtgccatggtggtgtatgtgatgatgaatggtgtgtctggaatgcatggtttatatataagtaattaagtataatcgcttggtgtcactctagtgcctcctgccttgctcgctcgcccctgtttatatcttgtgatgtatcgttgagtgagtgttgtaagaacgaggagtttggtctttgcattataatagttgcttaagttggtcagtaaccgtcgcaatttgttg</dnaseqindica> |
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