Os01g0260100

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Revision as of 04:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0260100| Description = Similar to Kinesin heavy chain (Fragment)| Version = NM_001185336.1 GI:297719806 GeneID:9267695| Length = 6954 bp| ...")
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Gene Name

Os01g0260100

Description

Similar to Kinesin heavy chain (Fragment)

Version

NM_001185336.1 GI:297719806 GeneID:9267695

Length

6954 bp

Definition

Oryza sativa Japonica Group Os01g0260100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8733747..8740700

Sequence Coding Region

8738545..8738559,8738673..8738779,8738898..8739062,8739181..8739264,8739344..8739563

Expression

GEO Profiles:Os01g0260100

Genome Context

<gbrowseImage1> name=NC_008394:8733747..8740700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8733747..8740700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtgcaacccgcaagaaccatgcggaatctcccagatacactgtcatccctcatggggttcaacaagcacctcacgcctagttggattgaatcagtgtctcacatcattgatgggttgtcacctaccaagccacaaatgaaagtaatggttgagaaggatgaaaatatcagtgatgacaatacagaatcagaggctaaagttcaaaaaattcaagatgaactggtttcactgaatgctcaactaaagcagataacactgcagaggagagaggcactaaataactacttggatttgaaaggaaatataagggtgttttgccgtataaggccttttcatcatgaagaaagttacagttcaagaaatctgttcactctggatgagagcaatgtttttctgaaagttgctgaaaccaagagaaaacaatacaagtttgataaggttttcgatcaattctcaacacaaggtgatgtattttccgaagttgaaccagtgataaaatctgctttagatggctacaatgtttgcatatttgcctacggtcaaacaggtagtggaaaaacttatacaatgtccattaccatatga</cdnaseq>

Protein Sequence

<aaseq>MDVQPARTMRNLPDTLSSLMGFNKHLTPSWIESVSHIIDGLSPT KPQMKVMVEKDENISDDNTESEAKVQKIQDELVSLNAQLKQITLQRREALNNYLDLKG NIRVFCRIRPFHHEESYSSRNLFTLDESNVFLKVAETKRKQYKFDKVFDQFSTQGDVF SEVEPVIKSALDGYNVCIFAYGQTGSGKTYTMSITI</aaseq>

Gene Sequence

<dnaseqindica>2142..2156#1922..2028#1639..1803#1437..1520#1138..1357#atacttaattaccatcaccactcccaccctgcttcactctgtgtccctgtgacagacaaaaaaaaaaacactgagggagttacagctgttgtggttctgactgatctcgagctcccttgaccaaagaatcccaagcaacggagaagcatatgctgctttgctttgtcagcttccttgggtatgtacatatggcacagctgaaacagcaagctccattccatagctaggtgtcccaaggtctatttgatctgcagttataaggacagttttggaggtagcagctacggcagattgtactgtcaagattccaaatgatgaaacaaacaggaggtacttgcatattctgatctagaatctctctcactgggtgtgtcggttgggcactcttcacccttgatggtgacatgctgatggatatatggagcagaaaaactgccttgaaggtgaaaagaagagctagctgaggactctgaggtatcgcaaagtttcttctcttccaatgctctcaagccttatttcacacttcaattaccctgcaagaacaagcaacgattatttcctttatcttgtttcatgatcgtttctgttttatctaacctaggaaatgcagtggttggaggccttgaagtagaactgaccttttcttgagaggtgatagagaccttggaaccccaagaaggatttaagcaatgtatgcgttctccagaggcagctcccacacccagcattctccttgctcttgcagtccgtagacatttgaccgagtatggaagtgaagcctgtgcaggtacgagctgcaaatatcaccttatccttatagatatagtcttcatgttgttctttctatatccttctcaagtctaactgccacaaaaacacttcgtcaggtattgattagaaaaccgtagcaaaagccttggttgtcaactacatgtggtcagaataggcatgctgaaatcgcccagtctgctgattcatgcctgacttcaacaaaacaccattttattttatttttctgactgaccttataatctcattccgcaatggcaggtggaatcaccagcagagaagcaaataggatcagtaggatagagatcagcggcactggttcttggcaacaactggtgtactatatacatggatgtgcaacccgcaagaaccatgcggaatctcccagatacactgtcatccctcatggggttcaacaagcacctcacgcctagttggattgaatcagtgtctcacatcattgatgggttgtcacctaccaagccacaaatgaaagtaatggttgagaaggatgaaaatatcagtgatgacaatacagaatcagaggctaaagttcaaaaaattcaaggtatgcacttctaatcttgccctcaaaagctctaagcgcttctgggaatttctcaacttttgtttgcttattactacagatgaactggtttcactgaatgctcaactaaagcagataacactgcagaggagagaggcactaaataactacttggatttgaaaggtttgagctttgttcctgaattttctgtctgcgaaaattcgtttatctttggttttgtaagcttcaacaaagacaacagatgccactacatgttgattgacatgtctttatcccacaggaaatataagggtgttttgccgtataaggccttttcatcatgaagaaagttacagttcaagaaatctgttcactctggatgagagcaatgtttttctgaaagttgctgaaaccaagagaaaacaatacaagtttgataaggttttcgatcaattctcaacacaaggtattgaatcataccaatacttaataaaagtggaacaaattatttgaatgcatatcaagttacaatggtattttccgaagttggaccagtgaacaaattatttggtatgtttttccaggtgatgtattttccgaagttgaaccagtgataaaatctgctttagatggctacaatgtttgcatatttgcctacggtcaaacaggtagtggaaaaacttatacaatggtaagattttccctattgatcacttttattcccatcatcccctccatgcacaaaaggataaatgaaaagtataaacacaccaaaccgactgaattcaaatgttttacttacagtccattaccatatgaattaggaaggcaagcctacaaatttgggtgtcataccacgtgggattcaaacactgttcaaccaagcttcagaatgcaacaataggtttctgttcactttcagtatgcttgagatatatatggggaacatacgagatctactagccccaagaagcaagactaacgggattaagaatgtaccaaggtaattttctaaatttgttcagagaaaaatactttttgcaaaacaaataatgataaagatagaaaaagaaaaggaaattaaagtatctcaggtatgtcagttctgaataaaatgaaaattggagccagttcctgactatgatgcagtcatgcagccacagcaatgaaccacgaacaagtgtcaattacgtgtctcttgaaaaatgttgaatcccaagacactaaaaatgtattccggatatggtccaatatagttcatgaatgagctaacaaacaagattctaatatagtttgatgcattatttgacttagttgtgctcttgttttacacctaatgttaccaaagcttgtactattaacttgacaatattttgcaatttcggatttccttgtgcctgccattgatatgacttatgaggctgtcagggtcactgttcatatgtaagcagggtatgccacaatgttcatatgcaagcatccattcctaattacaaagaggaaaaggaggaaaaagaaaaaggtgtaccatattattgacttcaagtaacagggtttcctgtacttcatcaggatatatctcataagtcatatcagctgaaaatgttgaaaataatagttttttcctgtaaatatggatagtctgggaaaatgccacaatcatgcagtataatttttgtccctatactgcatataggtgtgacacaaacaacaaacgaaatgaatatggtctatcattttgtagaacccaatattgaaggtttacccctttcaaggatctaaattaaaagatagccctttaatctcaaaaaaagggaaagaagatcctgcaatcattaacttgtgaattgcttgtgttgtccctgaactttaggataatacaggtttaattcgcttttatatatccgtgcacatttataaactttgcatttattgaattaaactattatttattgtttatgtgcatccagcctctccattaaatcagaccctgatggtggcattgagattgaagatctggtagcagttactgtgaatagttttcaagaagtgaaaagattgtatgaaatggggacccgtcttagatcaacagcttccactatggcaaattctacttcaagcagatctcactggtaaatttttattttattgaagaaaagatttcttatatatatctatacaattagaatatcaactatgattgcacctgactgaaagaggattcaatcaaaagttagagagcaaatgttcacagaaacatcttgagtgaataaaatggttgtttttaaattgagaaccatggaataatcactttcctgaaactctgtactttatttgttcatttatgcaacagtttgattcgcatctcattgacttccttgaatgcaactgagagaagaaaagcaacaagtaaattgtggatgattgatctaggtgggagtgaaagacttgtaaagacaaaagcaactgggaaaaggctcaaggaagggaaagccataaatttgtcgttgtcagccctaggcgatgtgattgacgcactacagactaaaaaaccccatgtcccttacaggtaaatgaaactcataatgcacaagtgtatggaaattggtacatggctgccatttcatcagaaaaatatgacaaaacactaacatgtcgcccttccaaatttgcagaaatagtaagcttacacaagtactgagagattctctaggtaaagtagttcatcagtaactatttcaaaagggataacaacatatgtagttgaattattttacacatatttttacagcttaccttgacatattcatgtttaattgttgacaggatgtgaatccaaaacattgatgcttgtccatatcagcccagatgagggtgatttgtgtgagacaatttgcaccttgggttttgcaacaagagtgagaagtattcgcctggaaagtgaagaaccaccagtaagattttgctcttaccattatgatgagtgtatatgcaataactaccagatggctattttattcatttattcattaaaaatagcataaaccaaacattaattaaggtaataagacagttaatgctctcacatttcaatttgcaaagggacaacttcaaaaacaagatcatttttatgaaaaagttgagctctgtgtgatcagccaaaattaaagaatgctcggtttgtatttttacaaaacatgatatttgcattcatgcacacataaaaataaacttttatgtgaatttttattaagtcgactaatgactacacaacatgttttgatctcaaacaggagatgaaagcaaggaaggaaacattattaatagatttaggacagaaggtcaatgatttggaacatgaatgtgaagatattagaagaaaaattaagaatctcgaggagagtatggagcatttgacaggacctcagccaactatttactctaattttgacatgtcacatctatccagtgaagaactgaaaacagatgtatcaagtaatgtgaggaattcaaagaatcgcagagaagcctcttccaggttaccaaggttcatgaagccaactgcttctagccagcacaggataggcttaaataatcgcactcccattattaacaggctaaaaccaccagtaccaccaaggaggcggccttcctcagtttatgctgagtctgtaatggtcccagtaaatgctgccccttggcaatcagaatgcagctccgaatgcagtatgtccttaacaagtgacatgaattggacaccaagcatacgagatggaactgaatgtagccaggatgcatcagaatacgagattaaacaggtgattttctcagaacatgagaaatcatcgcatgatcaagtgacctgctacacagattatccacttgcagaatctagagatatacagattaaaatcgaagagaagggaattgtagacattgacaattggctccaccaacaaatcgttgagaagactagcacatttcgaagcaaaatggtgcttgatattcccggagtaactgaagctgaaatccatgtttctagtattccttcaccaactactatggcatgcactaaagaagatagccaggtaaaggatgaagtaatgggcctaacccttcaatcctcaacagactatgtcgaggatataaagcaaagcaagactgataatcaattcacagcaaaagaattatgcactccaccatttaaagaatttagcagcaacaatgaagtgaagggacataaaaacgaacatcctgtgtaccatgggagacccagaaggtcactacaggaagaactggaaaattgcacgctagagaagccaaacatggactcaaaatctcacaggtcacatgatgataaacacaaaacaggtaatgttctgtcttacaccggagaatgagcatctacgagaatttaaattttcctggaaaaaagccactatgcatcccagtatcatctggatttattgaagttgctcctaaatttgaagccacggtaagagaatgcttagcaacaaaacattttagaatatgcctatatagatgcagaaaagttcatgacaccagaattgcacatggaacaacatgaataaattgtatccacataaatctagttgtacttggcaaacaaccacaaatgatccaaatacttataatcacatttttgcaatatctaagacagaaaactccatcatgcaatggtgttcagcctttctgaaaagttactctttggtgtatattagacccaaaaaaactccacaaatcagccatgtagcagacattgtgaaacagcatgtttatgcatgaaagagaaccttaaaatgtaggtagaccttgcaatttactgtaattgttgttagatataggtagtaaatgtaaaatctacaggaaatctttccaaaaaaataatcaaataacgatttttctgtagaatttattcctagagcgaaaatagaataaatattgaaagtaaacttcagtagataaatttttgagagaaaaaacttcagtacatagaaactgaagtttctaaattgacttccacaatgacatgaatatctgtaatttttagctaaatatctcagtaaagcatgtcatgcaaaatttctctgttttggtactatcattttgaacagaatgcacaactagcatacaaatactatcatttatccacttgggatttccgcctgtctacaatctacacatagttcttgttcaataagctatattaccggtttatacttcactgcagggaagttcacaaagttctttcaagctcttcaaacagcatggattggtgctcttctagcactgggaactgtaagcattggattagagcatggcttctttcagagtttgacactctaaagtacctagaatctcatcactttgagatatagtattgaattttaagagaaactactacaggaagtaatgctctcggtgtatattgtaccacgagcacacaatgaaatatgtccagccagtaccacaattgcaggtgaactgttgattgatgctaaaagagctcctttgatttctgatgaattctttcagaaagccaaaaaaattggggtatttgagtaagaatgaaggaatgatcatacaagaaaattgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0260100, RefSeq:Os01g0260100