Os10g0477600

From RiceWiki
Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0477600| Description = Similar to NAM / CUC2-like protein| Version = NM_001071392.1 GI:115482527 GeneID:4348901| Length = 2255 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0477600

Description

Similar to NAM / CUC2-like protein

Version

NM_001071392.1 GI:115482527 GeneID:4348901

Length

2255 bp

Definition

Oryza sativa Japonica Group Os10g0477600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18306303..18308557

Sequence Coding Region

18306460..18306631,18307299..18307564,18307697..18308233

Expression

GEO Profiles:Os10g0477600

Genome Context

<gbrowseImage1> name=NC_008403:18306303..18308557 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18306303..18308557 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgggctgagggagatggagtcgacgctgccgccggggttcagattctgccccagcgacgaggagctcatctgcttctacctccgcaacaaggtcgccaaccaccgcgtcgcctccggcaccctcgtcgacgtcgaccttcacgcccgcgagccatgggagcttcccgaggtggctaagctcactgcagaggagtggtacttcttcagcttcagagaccggaaatatgcgacagggtcacggacgaaccgtgcgaccaagacaggttactggaaggccacggggaaggaccggattgtccatgagggtacaacacgagcggtggtcgggatgaggaagacgctggttttttacctcggccgtgcccctaatgggcaaaagacgacatgggtcatgcatgagttccgccttgaaacacctaactcccaacctaaggaggattgggtgctatgtagggtgtttgacaagaagaagccatcgacaatagaagccgagggtggcggaagcagtggcagcgaccttttcattcccggtgccaccgatggctctactgacccctcctcgccgacgacgatggcacctctccttggctcatcgcccgatccgacagtggtggacaggttcgaccaccggtcagcggcggtgccaccattaatggtactcatgcaaggtggtggggaccaaatgatcagtggtagcggtgtccactgcagcaacaacgacaactccggtagtagcagcgcactgcttaacctgacgatgctgcaatacagcttcctagaacatcggccaactggtgacgacatggcggtgggggcccactttggaacatgccagggtggcaacaacgatgccacgatggcacttgggatggggtttgaggagcatggcatgggagagatcatagagatggaaccagcatggcgccaaggtggtagcaactgcgtgtacagggacgagctctacttctag</cdnaseq>

Protein Sequence

<aaseq>MAGLREMESTLPPGFRFCPSDEELICFYLRNKVANHRVASGTLV DVDLHAREPWELPEVAKLTAEEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDRIVH EGTTRAVVGMRKTLVFYLGRAPNGQKTTWVMHEFRLETPNSQPKEDWVLCRVFDKKKP STIEAEGGGSSGSDLFIPGATDGSTDPSSPTTMAPLLGSSPDPTVVDRFDHRSAAVPP LMVLMQGGGDQMISGSGVHCSNNDNSGSSSALLNLTMLQYSFLEHRPTGDDMAVGAHF GTCQGGNNDATMALGMGFEEHGMGEIIEMEPAWRQGGSNCVYRDELYF</aaseq>

Gene Sequence

<dnaseqindica>158..329#997..1262#1395..1931#aagaagagatcatatttagctatatctctagctagctgcgtctcgtcttctccaagctattgttacttagctagctttagctaggagagtaaaagatcgagtgatcattagtgagtttgattagttgattttgttggggttgagatcgaagagatcgatggccgggctgagggagatggagtcgacgctgccgccggggttcagattctgccccagcgacgaggagctcatctgcttctacctccgcaacaaggtcgccaaccaccgcgtcgcctccggcaccctcgtcgacgtcgaccttcacgcccgcgagccatgggagcttcccggtaaccttaccctacaaacctactttgtccagacacatagtcagaagtattgtatttttttttttacaatgaattgagatcgggtgcgaaatttcactgtacacaagagagatacagtgttggtgccttgataattgtttgataattagttaatcatttggggttccttggagcacaagcatatagctataggtgtagatagatagatacagaatgtgcacgagatgatcatcagctagctattatagcttgcaagcaatcataaaattagcggcaataatttcgtgatggttccttggctagctagctcacaagtcacaagactccaagtctcgcaagctagagaccaataacgacctgtttatatgtccacttctagctagctagggccactcagagaattataaaaacgtcactgtttgccagtaacagtgaccgctgtaacacttcacgtgcaagcgtatccaatccctctctcatgatctcacgtacctagctctacagtgtaggtacagatacaacagttaattagtatctctaatgtatattattattaactttgatgctttaatgaagggtgtaacatagcactaaatggttattaattagctgatgattggatgcatatgagagcttaattagtttttattttgttaacttttttcagaggtggctaagctcactgcagaggagtggtacttcttcagcttcagagaccggaaatatgcgacagggtcacggacgaaccgtgcgaccaagacaggttactggaaggccacggggaaggaccggattgtccatgagggtacaacacgagcggtggtcgggatgaggaagacgctggttttttacctcggccgtgcccctaatgggcaaaagacgacatgggtcatgcatgagttccgccttgaaacacctaactcccaacctaaggtgtgtgccttagctctatattacctttctcgtagaaatatttttcaatagctaagcactactacttaatttggtgtgctcagattcacataataattaatcatggtctatgtattcttttgtgtcaagcaggaggattgggtgctatgtagggtgtttgacaagaagaagccatcgacaatagaagccgagggtggcggaagcagtggcagcgaccttttcattcccggtgccaccgatggctctactgacccctcctcgccgacgacgatggcacctctccttggctcatcgcccgatccgacagtggtggacaggttcgaccaccggtcagcggcggtgccaccattaatggtactcatgcaaggtggtggggaccaaatgatcagtggtagcggtgtccactgcagcaacaacgacaactccggtagtagcagcgcactgcttaacctgacgatgctgcaatacagcttcctagaacatcggccaactggtgacgacatggcggtgggggcccactttggaacatgccagggtggcaacaacgatgccacgatggcacttgggatggggtttgaggagcatggcatgggagagatcatagagatggaaccagcatggcgccaaggtggtagcaactgcgtgtacagggacgagctctacttctagcagaagtagtacaatggattaatattaatgatttgcatgtgttagagttcagttaaattcagaaaatatgtagagcttagaagaggtttgctagtttgtgattagagtgtgattattaattaaggtggagttaattaaggggtcgattagttcgagtggtcgtgatatgaaaatatttgtgtaattactcagtttgtaggtgagccatatatcaaacaactttagggaaaggggatgatcaagaattcagaaccaggatgaatttgatattcttgtactttaaaaaatgtaatgatgggaataatatttaaatctgattgagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0477600, RefSeq:Os10g0477600