Os01g0267100

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0267100| Description = MT-A70 family protein| Version = NM_001049217.1 GI:115435847 GeneID:4324378| Length = 5925 bp| Definition = Oryza s...")
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Gene Name

Os01g0267100

Description

MT-A70 family protein

Version

NM_001049217.1 GI:115435847 GeneID:4324378

Length

5925 bp

Definition

Oryza sativa Japonica Group Os01g0267100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9158733..9164657

Sequence Coding Region

9161005..9162702,9162817..9162900,9163075..9163179,9163290..9163398,9163936..9164087
,9164190..9164336

Expression

GEO Profiles:Os01g0267100

Genome Context

<gbrowseImage1> name=NC_008394:9158733..9164657 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9158733..9164657 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcttgcagttggctgactatcatttgagaatggactcacgatcaccaaaaattccaaggagaagtcctgattccaaggataaggactctgataggaacaaggaaagagatgccaagaatgattgggactcatcaagagcatatggctctgagactgattgcaaggaggaaatgtgtgatagcaataagaggaagggtttgaccatgggggaaattgttgttgacaatagcagatcagtggatagttgtcatgaaactgaattgcatgtgttaagagatgatcggcaggataaatctgtagagataaaagatattttgcatgatggagttgcaaaaagtgactatgctcaacgccagatagacttggatagtgaaagaaggaatggtacgggagataactcaagggtggatgtcctgagagatgacaaattagacagcggaagggacagaaactggagcgacagaacacgggagcctgaaggatctaaggactatgtgaggaatcgtcagtggcaagattctaaggaggcaaatgattctgaatggaagaatgcacatgaaagactagatggtgggagtttccatgggcgagctggttaccggcgagattctaggggtagatctgaaagtattagaggttcttcaacctatggaggtcggtatgacagttctgattcaatagagatccgaccaaataacaatcttgattttggacgagagggctctgtttctggaagaagatatgatgtgggagctcatcgggatgcaacacctggaacgaatggtgataaatccgccaatcctgaagcagatcaaagtggtagtaccagcacgatttctcaatttcctcaacatggtcctaaaggtgatagatcctcaagaggaagaggtagaccaaatagcagggattctcaaagagttggaggcacattaccaattatgccccctccttttggtcctcttggtctgccaccaggaccaatgcaacatattgggccaaatattccccactctccaggccctcttctacctggtgtttttgtgccgccattccctgggcctcttgtgtggcctggggcacgaggtgttgatgtgaatatgctttctgttccacccaatcttcccatccctccagttgctgctgaacatagattcgctccaagtatgggagctgggcctggtcataatattcacctaaaccaaatcggctctggaataggtgctccgacaaatgtgtctggattgagtttccatcaattgggcacgcaaagtcgtgaaatggcacatgataaaccgcctgctggtggtggttggacgccacatagaaacagtggaccaaccagaaaagctccttcaaggggtgagcagaatgattactcacagaactttgtggacactggcatgcgacctcaaaatttcattagagaactggatcttacaagtgtagcagaggactatccaaaattgagagaactcatccagaggaaagatgaaattgttgccaattctgcttcaccaccaatgtattataagtgtgatctgaggcaacatgttctttctccagaattttttggtacaaagtttgatgttattcttgtggatcctccatgggaggagtatgttcaccgggcaccaggaatcacagatcacatagagtattggaatgctgaggagattatgaatttaaagattgaggctatagcagatactccatcttttgtcttcctttgggttggtgatggtgtaggtcttgagcagggccgtcaatgcttaaagaagtggggatttcgtagatgtgaggatgtttgctgggtaaaaaccaacaagaaaaatgcaacacccagtctgcggcatgactctcatacaatactgcaacactcaaaggagcattgcttgatgggtattaaaggaacagtgcgacgtagcactgatggacatgttatccacgctaatattgacacagatataataatagctgaagaaccaaccgatggctcaactaaaaagcctgaagacatgtacagaataattgagcatttcgctcttggaaagaggcgccttgaactctttggagaggatcataacattcgtcctggttggcttactctcgggaaaggtttatcgtattccaacttcaacaaagaggcttatatcaagaactttgcagacaaggatgggaaagtatggcagggaggcggtggacgaaatcctcctccggaggctccccatctagttgtgacgacacctgagattgagggcctcaggccaaagtcacccccacagaagaactaa</cdnaseq>

Protein Sequence

<aaseq>MFLQLADYHLRMDSRSPKIPRRSPDSKDKDSDRNKERDAKNDWD SSRAYGSETDCKEEMCDSNKRKGLTMGEIVVDNSRSVDSCHETELHVLRDDRQDKSVE IKDILHDGVAKSDYAQRQIDLDSERRNGTGDNSRVDVLRDDKLDSGRDRNWSDRTREP EGSKDYVRNRQWQDSKEANDSEWKNAHERLDGGSFHGRAGYRRDSRGRSESIRGSSTY GGRYDSSDSIEIRPNNNLDFGREGSVSGRRYDVGAHRDATPGTNGDKSANPEADQSGS TSTISQFPQHGPKGDRSSRGRGRPNSRDSQRVGGTLPIMPPPFGPLGLPPGPMQHIGP NIPHSPGPLLPGVFVPPFPGPLVWPGARGVDVNMLSVPPNLPIPPVAAEHRFAPSMGA GPGHNIHLNQIGSGIGAPTNVSGLSFHQLGTQSREMAHDKPPAGGGWTPHRNSGPTRK APSRGEQNDYSQNFVDTGMRPQNFIRELDLTSVAEDYPKLRELIQRKDEIVANSASPP MYYKCDLRQHVLSPEFFGTKFDVILVDPPWEEYVHRAPGITDHIEYWNAEEIMNLKIE AIADTPSFVFLWVGDGVGLEQGRQCLKKWGFRRCEDVCWVKTNKKNATPSLRHDSHTI LQHSKEHCLMGIKGTVRRSTDGHVIHANIDTDIIIAEEPTDGSTKKPEDMYRIIEHFA LGKRRLELFGEDHNIRPGWLTLGKGLSYSNFNKEAYIKNFADKDGKVWQGGGGRNPPP EAPHLVVTTPEIEGLRPKSPPQKN</aaseq>

Gene Sequence

<dnaseqindica>2273..3970#4085..4168#4343..4447#4558..4666#5204..5355#5458..5604#agctcctcccccggtaggtggacgaccggcgagctccaccctcacgcacggacgccggcgagctcctcccctggcgcgcggacggcaggcgagctcctcccccatccgcgaacgccggagagctcctccccggcgcgcggacggcaggtgagctcgtcccccgcaggcggacggcaggcgagctcctccaccgcgcacggacgccggcgagctcgcgggacggccagcaggctcctcccccgcgcgtggatgaccggtgagctcctcacccggcaggcggacggccggcgagtcttccctcacgcgcggacgccggtgagctcctcacatagtaggcggacggccggcgagctcctttcccacgagaggacgccggcgagctcctccccctgcgcatggatggccggcaacctcgcgggactgccggtgggctcctcccccgcgcgtggacggccggcgagctcctcccccgtacgtgcaccgtcgccgtcgccgccgccctgcctctagtgttggaaggtgagagcagtgtaaaagatgagagagagtgggggaagaggtgaggatgacatgtagggcccacatgtccgtgggtcccactatttcttttttttaatgacacgtcggtcccacaatttttttattacttttgtgccagataagcgacacgtcgacgacacgtgggacgaagaccgagtcaacaccgtcatataggcgccacgtcaaccaaaacctcttccaaaaccacccagggatgggatatagtttgcatcggttttaatagttgggggagtcaatatacctggttttgttttgtggttggaggttatgaatcatactcggaccatagttgagggagtccaactatactttttccgatgatatacacgtgcttgtttctagtgggacgtatcagatagcccgcaatcatattccgacccaattgaaatctgataccgggctgggccgtatccattactagaatgaatatacggcccaattgaaagcttacaggcacggcgtgagcgcggcgtggcttagcccaaatcgaccgaccgatcgattccaggagcgtcgagcgcctccgccgcgctccgccgcgctccgccgccgccgctgctctccccgcccctcgcggggaagtcgcgcgaggcgtcgtcggcggagagcgcgctgtggtgcgccgccgccgccgcggcagcctacgcccttgtccgtgttgaatagtactactaccatataaacagtccgtcgccggaggttctgctagggtttcggctagcggggtgtgaggtgggccgtccgccgccgcctcggcttggagcttggccaccccctcggcaaggccggcgccgcgctgctccgccgccttcccctctcccagccagcgcgcgccgccgccttccctgagttcctccctgacggatcccgcaggttccttgctattagtaatcgttaatttttttactgggtgatttcatgttcttgtaaagaatttcagggtagaaatccgagtaatttcttctctctctgttgatgttttttttccttcaaattttctgttcatgcgtatctacatgtttgtacagccaaacttgaaactgtgcatgcgcatcaccttcatgcccaaaatttacatgaattccttccaaacatagtaaaggaaatggtaaccaaacaatgcattccttccaaacacagtaaaggaaatgataaccaaacaatttcttcctttcattactgtttgcggtttcagactcttaccaaacaccaccttaatttaaatcttgctccagttttgcaccttatttgacatgtatgcactgttgtatattacccagccccattgttaaagaggaacgtagtagatgtgtactactataccacagtatattatcttttggggtttgaaagtaagccttgtttccatgaaaaaaatgttccgacatccttcctttgtatcgaagaccttgtttcaattagttgtttacatatttaacgcaagctcacttgtgtggtacgaattctgtaatgctattatgtgctgcaagtataatatattttaccattcttttatgtagtgaaacctgaagtttttagccaatggtttctgagatcagctgtattattcagatttgtgtagtgaaacctgaagtttagccaatggtttctgagatcagttgtattattcggatttatgctgtgaaacctgaagtttagccaaaggtttctgagatcagttgtattcttcggaggagggataacaatatttatgttcttgcagttggctgactatcatttgagaatggactcacgatcaccaaaaattccaaggagaagtcctgattccaaggataaggactctgataggaacaaggaaagagatgccaagaatgattgggactcatcaagagcatatggctctgagactgattgcaaggaggaaatgtgtgatagcaataagaggaagggtttgaccatgggggaaattgttgttgacaatagcagatcagtggatagttgtcatgaaactgaattgcatgtgttaagagatgatcggcaggataaatctgtagagataaaagatattttgcatgatggagttgcaaaaagtgactatgctcaacgccagatagacttggatagtgaaagaaggaatggtacgggagataactcaagggtggatgtcctgagagatgacaaattagacagcggaagggacagaaactggagcgacagaacacgggagcctgaaggatctaaggactatgtgaggaatcgtcagtggcaagattctaaggaggcaaatgattctgaatggaagaatgcacatgaaagactagatggtgggagtttccatgggcgagctggttaccggcgagattctaggggtagatctgaaagtattagaggttcttcaacctatggaggtcggtatgacagttctgattcaatagagatccgaccaaataacaatcttgattttggacgagagggctctgtttctggaagaagatatgatgtgggagctcatcgggatgcaacacctggaacgaatggtgataaatccgccaatcctgaagcagatcaaagtggtagtaccagcacgatttctcaatttcctcaacatggtcctaaaggtgatagatcctcaagaggaagaggtagaccaaatagcagggattctcaaagagttggaggcacattaccaattatgccccctccttttggtcctcttggtctgccaccaggaccaatgcaacatattgggccaaatattccccactctccaggccctcttctacctggtgtttttgtgccgccattccctgggcctcttgtgtggcctggggcacgaggtgttgatgtgaatatgctttctgttccacccaatcttcccatccctccagttgctgctgaacatagattcgctccaagtatgggagctgggcctggtcataatattcacctaaaccaaatcggctctggaataggtgctccgacaaatgtgtctggattgagtttccatcaattgggcacgcaaagtcgtgaaatggcacatgataaaccgcctgctggtggtggttggacgccacatagaaacagtggaccaaccagaaaagctccttcaaggggtgagcagaatgattactcacagaactttgtggacactggcatgcgacctcaaaatttcattagagaactggatcttacaagtgtagcagaggactatccaaaattgagagaactcatccagaggaaagatgaaattgttgccaattctgcttcaccaccaatgtattataagtgtgatctgaggcaacatgttctttctccagaattttttggtacaaagtttgatgttattcttgtggatcctccatgggaggagtatgttcaccgggcaccaggaatcacagatcacatagagtattggaatgctgaggagattatgaatttaaagattgaggttgctctctttgtttagttgtttcattctttcggttttggatctgaagtcttcttttggtgttcaatttatgcatacaattaatgtgcttcagtgcattttacgatcatacaggctatagcagatactccatcttttgtcttcctttgggttggtgatggtgtaggtcttgagcagggccgtcaatgcttaaagaaggtgaggtggattttaatagttgtgcaattattctttatagtaaggccatccaggcttctgtaagcttggatatccgttaattcaagacctgtaaatgattgcacgtagcttttttaataaaaaaaatcaactcatggatgaaatggatcctgactgaagcttgtctttgtccagtggggatttcgtagatgtgaggatgtttgctgggtaaaaaccaacaagaaaaatgcaacacccagtctgcggcatgactctcatacaatactgcaacactcaaaggtagtgttatacttgacttcaatactttatgctccagaacatctatcttctgtttttacctcattttttctttatcttgcttgtgaagtttcactcttttatttatccaggagcattgcttgatgggtattaaaggaacagtgcgacgtagcactgatggacatgttatccacgctaatattgacacagatataataatagctgaagaaccaaccgatggtattgtttcttatgttctatttcgatattcttattcttcatatatgctttgtgtactgaattgctttgtggcacaaggctttacgtgtacagtctacgccattatttttgttgagaatgtcagtatggcacatctttatgaataattatggtattgtcctttcatatgtaagttcatattttaccggcactgtcactaaattgttatgctatctactatttgttatgcatgattttgttgccttccacaacaccacttagcagatgaacttttctcctgttggttttgctagtcgttcgtttgtttatgtacagaacaaattttgaattttcttccaattttattgtacagatatgttctcatctgttgattctctagaatgcagcttggggatttaattctccacgtttctgtattttagagtatagctacttttgaatagtgcatattcctaagcatactgttttggttgagtatggttagcaacaaatgaaatttgtgtactgatgcctggaactgtttgcctgatcatacaggctcaactaaaaagcctgaagacatgtacagaataattgagcatttcgctcttggaaagaggcgccttgaactctttggagaggatcataacattcgtcctggttggcttactctcgggaaaggtttatcgtattccaacttcaacaaagaggtaaagaaagctgaaagcccaactttatgcgtgtgtacccgagcaaggagttttcatgagttcctcatatggtgattttttttttcacattctttcctgcaggcttatatcaagaactttgcagacaaggatgggaaagtatggcagggaggcggtggacgaaatcctcctccggaggctccccatctagttgtgacgacacctgagattgagggcctcaggccaaagtcacccccacagaagaactaagggcagcagccattgggctctataggtgtggttgcaagtgcacttacaagcgagcaacctggtagaatatccccgagatcagtagttaccgtgattggttcagacttgagaggctaattttttcgtacctgtagctttattacatcgcatttcctcttattgaagtttagccgaggtggtgcggatggatattcagtctaacagactcaatgaacgctttgttgtatgacttgtacagtactggctgctcgaacaggatggttcagcttccagaaatttggcaacgctccatttcaaagaaaatcattcagtatttgcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0267100, RefSeq:Os01g0267100