Os01g0268500

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0268500| Description = Glycoside hydrolase, family 31 protein| Version = NM_001049227.2 GI:297596517 GeneID:4326262| Length = 7566 bp| Def...")
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Gene Name

Os01g0268500

Description

Glycoside hydrolase, family 31 protein

Version

NM_001049227.2 GI:297596517 GeneID:4326262

Length

7566 bp

Definition

Oryza sativa Japonica Group Os01g0268500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9244608..9252173

Sequence Coding Region

9244608..9245728,9247676..9247808,9248213..9248428,9249782..9249937,9250276..9250959
,9251098..9251214,9251802..9252173

Expression

GEO Profiles:Os01g0268500

Genome Context

<gbrowseImage1> name=NC_008394:9244608..9252173 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9244608..9252173 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccgccgccgccgacgccatcgccggcgcagccgaagaccagaaagaaggaccacgtccgcctcaacaacccgttcccgagggccgtgccgtcgtcctccctccggcaccgggacgccgcgccgccgctctccttctcgccgtcctccaagctcgcccacggcgcccacgacttccctgtcggcccccacttcctcctccgctgggacccgtccctcggcggcgcggtgtcgctggctcctcgccgtggtggcggtggcgcgacgatgtgggagaccgtccccggcgtcgcgttcgtctcggcggcgtccgtggacaccgaggccgacgagtgccgcggctcgttcgcgctccgcgacggccgcgcccgcctcgtccccgaccgccagcgcgtcgacaggatccgcgccgtgtaccgccgcgacgccgacgccgacgccgacgccgacctcctgcgcgtcgccggcgcggcgttccaggcgtccgagcacgagcaggcgcggttccccgtggtggtgatcaccggcgtcgtgtccgccaggaagccgaccccctcgccgtcctgcctctgcggccggcgccgcgccgcagccgccgccggacggccggtcctctcggcgcggtactggatcctcctcgaggagaagagcgacacgcaggtcgcgttccgcgtcaacctcggcgactaccaatggagctgcgaccacgaccgccacgccacccacccatccccattgccatcgccatccccctccacctccccaagaacgcaccgcgccggcagcatcctccggctccgcctatccacccgggtgcagcggagcagcggcggcagcaagaagaagaagaagctcgccttcgccgccgcgggcgtcccggctgaccgggaggagctcgcgccgctcgtgccagcggcggcggcgaaggaggagttggagttcaaccgggtgtggatgacgttggcgagctcgcgggaggagaggttctacgggttcggggagcagttcagccgcgtggagtttaaggggaagcgcgtgccggtgttggtccaggagcaggggatcgggaggggcgaccagcccatcacgttcgccgccaacctcgtcagctacaggtctggaggaaactggagtactacgtatgctccgtctccgttctacatgacctcaaagatgagatctttgtacctcgagggatacgattactccatttttgacctgacaaagcctgatagagtgcagattcaggtgtacgggagttcagtccaggggaggatcctgcacggcggctcgccgacggagctgatcacgagctacacggagtcgacggggaggccgccggctcttccccggtggatcacgtccggcgcggtggtcgggatgcagggcggcacggacgccgtccgccgcgtctggaagcagctgcaggaccacgacgtcccggtctctgcattctggctgcaggattgggttggccagaggaagacgtccattggatcccagctatggtggaactgggaggtagacgacgaccactacgccggatggaatgatctggtccgcgatctccggcgccgcggcgtcaggaccatgacctactgcaacccatgcctcgtcccgatggacaagaaggcgaacgcgaggaggcacctgttcgaggaggccaagaagctggggctcctggtccgggacgccgccggcgagccgtacatgatgcccaacacggcgttcgacgtcgccatgctggacttcaccaacccggccgcgcgcgcctggttcaagggcgaggtcctcgccgtgatggcccgcggcggcgccgccggctggatggccgacttcggcgagggcctcccgctgaacgcgcggctgcactcctccggctccggcgacgacggccccgtcgcggcgcacaaccggtacccggagctgtgggcgcgcgtcaaccgcgagttcgccgacgagtggcgctccggcgagcaccgccgcgtcgcggacgacgccgacgacggcgacggcgacggcgagctggtgttcttcgtgcgggcggggttcagggagagctcgaggtgggcgatgctgttctgggaaggggaccagatggtgagctggcaggcgaacgacggcatcaagagcagcgtcgtcggcctcctcaccggcggcatgtccggcttcccgctcaaccacggcgacgccggcggctactgcaccgtcgacctgccgctcctccgctaccgccgcagcgaggagctcctcctccgatggctggagctcagcgccttcaccgtcgtcttccgcacccacgagggtaacaagccaggatccaactgccagttctactccaataaccgcacgctcgcgcatttcgcgcgctgcgcaaagatctacaaagcctgggagttctaccggatccagctcgtcgaggaggcggcggagaagggccttcccgtggcgcggcacctcttcctccactacccggaggatcagcgtgtgcagaagatgacataccaacaattcctggttgggacagagatgctggtggtgccggtcttggacaaggggaggagcacggtgaccgcctactttcccatgtcagatggcggcttatggaagcacgtttggaccggcgatgagttcggtggtcgtacgagtagagggggtgtaggagaggggatgtcgcatgggtctgaggccgaggttgaggcccggattggcttcccggctgtgtttgtgagagttgggtcgaccgttggagaaaggtttgtaagaaatttgagggatctcaaagtattatga</cdnaseq>

Protein Sequence

<aaseq>MAPPPPPTPSPAQPKTRKKDHVRLNNPFPRAVPSSSLRHRDAAP PLSFSPSSKLAHGAHDFPVGPHFLLRWDPSLGGAVSLAPRRGGGGATMWETVPGVAFV SAASVDTEADECRGSFALRDGRARLVPDRQRVDRIRAVYRRDADADADADLLRVAGAA FQASEHEQARFPVVVITGVVSARKPTPSPSCLCGRRRAAAAAGRPVLSARYWILLEEK SDTQVAFRVNLGDYQWSCDHDRHATHPSPLPSPSPSTSPRTHRAGSILRLRLSTRVQR SSGGSKKKKKLAFAAAGVPADREELAPLVPAAAAKEELEFNRVWMTLASSREERFYGF GEQFSRVEFKGKRVPVLVQEQGIGRGDQPITFAANLVSYRSGGNWSTTYAPSPFYMTS KMRSLYLEGYDYSIFDLTKPDRVQIQVYGSSVQGRILHGGSPTELITSYTESTGRPPA LPRWITSGAVVGMQGGTDAVRRVWKQLQDHDVPVSAFWLQDWVGQRKTSIGSQLWWNW EVDDDHYAGWNDLVRDLRRRGVRTMTYCNPCLVPMDKKANARRHLFEEAKKLGLLVRD AAGEPYMMPNTAFDVAMLDFTNPAARAWFKGEVLAVMARGGAAGWMADFGEGLPLNAR LHSSGSGDDGPVAAHNRYPELWARVNREFADEWRSGEHRRVADDADDGDGDGELVFFV RAGFRESSRWAMLFWEGDQMVSWQANDGIKSSVVGLLTGGMSGFPLNHGDAGGYCTVD LPLLRYRRSEELLLRWLELSAFTVVFRTHEGNKPGSNCQFYSNNRTLAHFARCAKIYK AWEFYRIQLVEEAAEKGLPVARHLFLHYPEDQRVQKMTYQQFLVGTEMLVVPVLDKGR STVTAYFPMSDGGLWKHVWTGDEFGGRTSRGGVGEGMSHGSEAEVEARIGFPAVFVRV GSTVGERFVRNLRDLKVL</aaseq>

Gene Sequence

<dnaseqindica>1..1121#3069..3201#3606..3821#5175..5330#5669..6352#6491..6607#7195..7566#atggcgccgccgccgccgccgacgccatcgccggcgcagccgaagaccagaaagaaggaccacgtccgcctcaacaacccgttcccgagggccgtgccgtcgtcctccctccggcaccgggacgccgcgccgccgctctccttctcgccgtcctccaagctcgcccacggcgcccacgacttccctgtcggcccccacttcctcctccgctgggacccgtccctcggcggcgcggtgtcgctggctcctcgccgtggtggcggtggcgcgacgatgtgggagaccgtccccggcgtcgcgttcgtctcggcggcgtccgtggacaccgaggccgacgagtgccgcggctcgttcgcgctccgcgacggccgcgcccgcctcgtccccgaccgccagcgcgtcgacaggatccgcgccgtgtaccgccgcgacgccgacgccgacgccgacgccgacctcctgcgcgtcgccggcgcggcgttccaggcgtccgagcacgagcaggcgcggttccccgtggtggtgatcaccggcgtcgtgtccgccaggaagccgaccccctcgccgtcctgcctctgcggccggcgccgcgccgcagccgccgccggacggccggtcctctcggcgcggtactggatcctcctcgaggagaagagcgacacgcaggtcgcgttccgcgtcaacctcggcgactaccaatggagctgcgaccacgaccgccacgccacccacccatccccattgccatcgccatccccctccacctccccaagaacgcaccgcgccggcagcatcctccggctccgcctatccacccgggtgcagcggagcagcggcggcagcaagaagaagaagaagctcgccttcgccgccgcgggcgtcccggctgaccgggaggagctcgcgccgctcgtgccagcggcggcggcgaaggaggagttggagttcaaccgggtgtggatgacgttggcgagctcgcgggaggagaggttctacgggttcggggagcagttcagccgcgtggagtttaaggggaagcgcgtgccggtgttggtccaggagcaggggatcgggaggggcgaccagcccatcacgttcgccgccaacctcgtcagctacaggtaacaagtcaaaatccacaatactccggcagctacagggtactctactccctccgtttcatattagagaagttacttcctccgtctctaaatatttgacgttattgattttttttaaatatatttgaccgttcatcttattcaaaaacttttgtgaaatatgcaaaactatatgtatacataaaagtatatttaacaataaattaaatgataggaaaataattaataattacttaaacttttgaataagataaacggtcacatatttaaaaaagtcaacggcaacaaatatttagagacggagggagtattttaatttttttaagtcaaacttagtattttaatagctttttttcatgttgaaaatattgcatatcttttctataaatttgataaagtttgatttagaaaaaaaagtcaaaacaacttacgatacgatgaaactgaggatacgatgaaactgaggtagtacgtattattgttgatttagtccaacattgaaactatgatcattaatactacctctcaaaatattagtatgataaatgattttagtttggaaaaataaaaatcgtatgagtacgtttttctttataggtacttccatttcaaatatatcaagttttagtaatttgcacgactattaaggggaggggtgaaaagtcttgttgccttttcggggggagtgagatataggcccttactagttgggaaactatcttttgatgctactccctccatttcatattacaagactttctagcattgactatattcatatagatgctaatgaatctatacacatatatgtttagattcattaacatttatatgaatgtgagtaatgctagaaagttttataatataaaacggaggaagtaggatagtatgggtagtttagtggtaaaggttatcttttgatggtaataggttgttatatttgaaagaaattttaaattttagaaattgttatattttgggatggaaggagtatttttataatattataattttgttatatgtcgtggttatattctaatagaaaaatattagttaatggtacatcaacggtgtcatgcatggttatacaatttttcacttatcatttataaattctttttacttcccggtttaccacatcaactctaggaaaattgcattcttgttcttgtgacatgtgagtacttctcaaaaggagatcagagctctttttgagtacggggaaaatttccgaattcccatgaaattgaacagatttctttaaaaatcgaccgcactgatcatattccttattatgtacatgacttattccagtttttttaaccctaccaaactttgacttcaaccaacaaaagatctttcaaagtttgatgttaccggtcctgacacggtccgttcggtcacatattcggtttctttgcgtcttggtaagcaatagaaagtactccagaaagttactgtttttgtagttgaatagtaagtagaaagtgaaaatcctcattgccagattgccatgcaagtgtcaagaactgcattgagagcttgcctgaacttatctaggagtagttatccaggcgttgccacttgcagctcatttggatgagctcgaagagtacagcaatttaaggtagaaaacgacattgcattgatagaaatcaccaaataattctaggaattgtaaggcctgcagatgagaactctgaaaccgcagcgacagtgactgaccgttgtgccttggttagagaatttgtagcttgtgcgtgtgtgcttgaaattcttgtgcagattgtacttctcttgagagaaattatcatgtcaaattgtcgatttgtgagcactgatccatgatttctacgagttttcttctcttcttttggataacttgatatgcattttttagtatgttgttgttcatggtggtttattactttgtttcgtcatgtataggtctggaggaaactggagtactacgtatgctccgtctccgttctacatgacctcaaagatgagatctttgtacctcgagggatacgattactccatttttgacctgacaaagcctgatagagtgcagattcaggtagccattccattaccccctaaacacatttctgaatcctgaatttctgactaatcattctgaactgtcaatacttgattagctaaactaaccagatccaagaacttcatcgatgttcatggacagaatttcaagaactcacattcactctgcttttgcgattttccaaataaaaaaaaaggagatttggagggagagacatccctccaaacattttaagaagaaattgtgagcgtgttaaaaccacacaccctttaccactgcactatcaagtgcatctcagaatttttcaatcataaaaccaagaacttcatcgatgttatggacagaattccaagaactcgcacatccattctgcttttgcaattcgccgattacaattctgtgctgaatgaatctggcaggtgtacgggagttcagtccaggggaggatcctgcacggcggctcgccgacggagctgatcacgagctacacggagtcgacggggaggccgccggctcttccccggtggatcacgtccggcgcggtggtcgggatgcagggcggcacggacgccgtccgccgcgtctggaagcagctgcaggaccacgacgtcccggtctctgcattctggctgcaggtctcaacctctccctctccctctccctctccctctctgaacctgagtttcttgttgcattcgatctgaactctgaacctactagctgaattccctacgcaattgccaaagtttgctactattccctatcatattcataggacttgtagtagataaatttgtcatacatgtgctagatcttttttttctctctctctagtacgtgtgctagaaacaatgctagtgtttatcggttctgtctaaaaacaaaagaaattgtctttttctacttatcatgcgaaggtcaagtaacaaacttagtgacagtaaaaagaaatgttctttatccattggaaatatatgtctctacatgaatcagttcttgtgttattttagcatctactagccttctaatagcatgtacaatagcaggctataagccagctataaccatattttaaaaagaaagagagagaatagcagcgtgctatagatatgtagccagctacagcacaaactctaagatgtaatgtgtgtatgaaagcacccgcaatggtaaagtaaggtgctatctataaaacatgtacatctcagcaatagactagattaatagtaaaccacttcaatggtatgtctacatgggtatctatagctctctaatccattgcctcgtttttctctatagactatctccatgttagtagatagctttgctctctcgcttcatttaatctctttcaagtaggaaaatatgctgacatggatctcttgtagagagtttatagataaccattgtggatgccctgataggtgagatcaaatattaatagtatagtaagcaaactattttatgaattaactattacatgggctatagatgatttggagctagtagtgggctatactattaaacttgctctaatacgtagacccaatgccaaggctttcttcgtagtatcgaataaaattatatagtagacttggccttagatgcgtttgaccaaaatgccacaattcttattggttaggtcttatgaacctattttttaactaaaatttgttcaatatttttttgaatggccaaaccattaccgacgttttatataaaaaataaaggtgccccgttttaaaaagaaaaggaaacaaccttacaatacacaattaattagaaaaaattgtgtgaaaccacaactaccatgaaactccaccagttaaaatttgttatagttgtcatgataaattgttgatggccttagacccctgactgtcgataatgataagaccatgatcctgatgcattcagcgctctgaaccaagtaaactctccatgatccaatttccaagctctggacaaattctttcacaaaaatgcaggattgggttggccagaggaagacgtccattggatcccagctatggtggaactgggaggtagacgacgaccactacgccggatggaatgatctggtccgcgatctccggcgccgcggcgtcaggaccatgacctactgcaacccatgcctcgtcccggtgagctccagagatcagtgatcatggcgacgatgcatgcagattcgatgctgctccctccgtttttaaatatttgacaccgttgatattttagcatatgttggatcgtccgtcttattaaaaacttatgtgaaatatataaaactatatatatatacataaaaatatatttaacagtaaatcaaataatggaaaaaaattaataattatttaaatttttgaataaaatggattgtcaaacataattaaaaagatcaacggcgtcaaatatttaaaaacggagggagtagcttttttgtgattctgaagcttgacgaagagaacaatggcgggtgcagatggacaagaaggcgaacgcgaggaggcacctgttcgaggaggccaagaagctggggctcctggtccgggacgccgccggcgagccgtacatgatgcccaacacggcgttcgacgtcgccatgctggacttcaccaacccggccgcgcgcgcctggttcaagggcgaggtcctcgccgtgatggcccgcggcggcgccgccggctggatggccgacttcggcgagggcctcccgctgaacgcgcggctgcactcctccggctccggcgacgacggccccgtcgcggcgcacaaccggtacccggagctgtgggcgcgcgtcaaccgcgagttcgccgacgagtggcgctccggcgagcaccgccgcgtcgcggacgacgccgacgacggcgacggcgacggcgagctggtgttcttcgtgcgggcggggttcagggagagctcgaggtgggcgatgctgttctgggaaggggaccagatggtgagctggcaggcgaacgacggcatcaagagcagcgtcgtcggcctcctcaccggcggcatgtccggcttcccgctcaaccacggcgacgccggcggctactgcaccgtcgacctgccgctcctccgctaccgccgcagcgaggagctcctcctccgatggctggagctcagcgccttcaccgtcgtcttccgcacccacgaggtacatacatatatatacatccatcagctgatcagctgacgccattgctgatcaaacaatgagctgattaattcgatcgagctagctagctagcaagatgatccattgatccaattaattctgagtttggatgtgcagggtaacaagccaggatccaactgccagttctactccaataaccgcacgctcgcgcatttcgcgcgctgcgcaaagatctacaaagcctgggagttctaccggatccagctcgtcgaggtactgaactgacacgtgacacgccactctctattccttctcgctcttatgtcattgcaaagcttttgcacgtgcctggaaaaaaaaagtttacacggtgcacgttacaggacataaataacgagtggacatctctcatgcaaatattattatatttgtatgtcatctaaatagttataaaaatcttttaaaaaaattgacaacatagattaatatgaagtatatcactccacaagcatacaaaccaaattcaacttctacaagttgcaacaaaaagaacaaaataaactaaaaatagttatcgtacattcgcagttatatttgttatttttgttacaatttgtaggagttgaattttaacctgcatgtttgtggagtgatatactatatcatattaatctatcttaccaaattttgtcaaaatttttaaagactatttaggtggcatacacgaaacgagaggatatcccctcaagggatgaaatcacttgcccatttagaagtgattgcccatatattgtatcatgtttacacagtattgtattgtactacctagttgtttatcctgacaactggtttcttctcaggaggcggcggagaagggccttcccgtggcgcggcacctcttcctccactacccggaggatcagcgtgtgcagaagatgacataccaacaattcctggttgggacagagatgctggtggtgccggtcttggacaaggggaggagcacggtgaccgcctactttcccatgtcagatggcggcttatggaagcacgtttggaccggcgatgagttcggtggtcgtacgagtagagggggtgtaggagaggggatgtcgcatgggtctgaggccgaggttgaggcccggattggcttcccggctgtgtttgtgagagttgggtcgaccgttggagaaaggtttgtaagaaatttgagggatctcaaagtattatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0268500, RefSeq:Os01g0268500