Os01g0268900

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0268900| Description = Conserved hypothetical protein| Version = NM_001049230.1 GI:115435873 GeneID:4326265| Length = 3398 bp| Definition ...")
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Gene Name

Os01g0268900

Description

Conserved hypothetical protein

Version

NM_001049230.1 GI:115435873 GeneID:4326265

Length

3398 bp

Definition

Oryza sativa Japonica Group Os01g0268900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9263958..9267355

Sequence Coding Region

9263970..9264389,9264478..9264583,9264805..9264857,9265229..9265360,9266230..9266302
,9267055..9267134

Expression

GEO Profiles:Os01g0268900

Genome Context

<gbrowseImage1> name=NC_008394:9263958..9267355 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9263958..9267355 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcggccgccgccgccgccgccgccgccgccctccccgccggcagccaggaccacatgaacgcgctccgctccaccgcactccgccgctccaccctgcactgggacgccgccgcggccttcttcgccccgcccttccgctcccgaagctgccgccgccgccgcgtgcctgctcctgccgccgccgccgagacgaggcccaccaggtccccctctagggctagggccagggcgcgggcgaagctactggcggacgccgatacgagggacccctggctggcctccctctcgctgctcccggtcgacgacggcgaggccgccgccgccgccgccgcggcctccaccggctgggcgattggggtggatcccgatacgggcggcgcaatcgccgtcctctcgcccgacgggtcctcgcaggtgtttgataacccgttcgtgcacatagtggtctcggagttcatccggaagcgcttggacaccaaatccatcatcgagctgctccgtggcctcgatgcgcctcctggaactacggcatatattgagaagtcaagcccatttccaactgatggaaagctgggatggtggagtacaggtttttcgtatggcctgtggattgctgctctagttgcatctggtttttcagttgttccagttgcatcacagacctggaaggcttattttgggctaacacgaagcggatcacctaaggactatagcaggcaagctgcttcaatcttgttcccggacaaggccctgtccctgaataggaagaaacatcatgggcgagcagaggcccttttgttagcggcctacggaaaaggtcttgtgctgccatcaggggagttcagcaaaacattatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAAAAALPAGSQDHMNALRSTALRRSTLHWDAAAAFFA PPFRSRSCRRRRVPAPAAAAETRPTRSPSRARARARAKLLADADTRDPWLASLSLLPV DDGEAAAAAAAASTGWAIGVDPDTGGAIAVLSPDGSSQVFDNPFVHIVVSEFIRKRLD TKSIIELLRGLDAPPGTTAYIEKSSPFPTDGKLGWWSTGFSYGLWIAALVASGFSVVP VASQTWKAYFGLTRSGSPKDYSRQAASILFPDKALSLNRKKHHGRAEALLLAAYGKGL VLPSGEFSKTL</aaseq>

Gene Sequence

<dnaseqindica>13..432#521..626#848..900#1272..1403#2273..2345#3098..3177#aattaattaattatggcagcggccgccgccgccgccgccgccgccgccctccccgccggcagccaggaccacatgaacgcgctccgctccaccgcactccgccgctccaccctgcactgggacgccgccgcggccttcttcgccccgcccttccgctcccgaagctgccgccgccgccgcgtgcctgctcctgccgccgccgccgagacgaggcccaccaggtccccctctagggctagggccagggcgcgggcgaagctactggcggacgccgatacgagggacccctggctggcctccctctcgctgctcccggtcgacgacggcgaggccgccgccgccgccgccgcggcctccaccggctgggcgattggggtggatcccgatacgggcggcgcaatcgccgtcctctcgcccgacgggtcctcgcaggtatggctgggtttctttgctccgatggaactcgcgcattctgtgtgtacaacttgtgtgcttgagcaaaggcgttcatgtcttgcaggtgtttgataacccgttcgtgcacatagtggtctcggagttcatccggaagcgcttggacaccaaatccatcatcgagctgctccgtggcctcgatgcgcctcctggtatgaacagatgggtgcaacttgtactgcttactgcattcttttgtgggtggtgctggtttgcttcgtgttgtgttcagcaatcagcacaagggacatggccattatgattactcattatggtcattcatagttatcacattcttcttttagatatgcgctatgtgaagaactgcattgtttctaatcatgatatcattgtttgtttcgctctcttgcaggaactacggcatatattgagaagtcaagcccatttccaactgatggaaagctggtattttcttttccttccttccatttagccattttgtagaagtccttgtgtcaacagtatcagactaatgtcccctgcattgattattggagaatgtatgcaattggatagcagtgctctcctatgtctttttattgacgatgtatgcacgattgcaatggtggaaaacaatagaactaatttttgcgacagtttgagatatcatgttcctgaggatgtttctcacataatctgaagtttagagttacactaaaacaatgaattccaatttgaaattattcataacttgaataatcacaccatgtggtgcaatgtgaatttcagcaataaatttctgttctgttggtgattttttttggggggtcatatagggatggtggagtacaggtttttcgtatggcctgtggattgctgctctagttgcatctggtttttcagttgttccagttgcatcacagacctggaaggcttattttgggctaacacgaagcggatcacctaaggtttgttactcttgtcatatggaagtatgcaacataaagttgctttatgactctttgtttctacaatctctagtagagttgtttgttaacctggaggtattggagagattttgcagaatatataacaagccatccaaattagttaaacgaaggtgtcaactaaaatgaacacactgtacaacatgaacataatgaggccaaaatgtgcgtgggagctggcttagggttgaagtacattataggttgggtataatggactattggagtttaacaagatgggatgggattgaggtctcacttcattaccagggctatgaagataacatgtgtctgtctgtattcttcttgtttctatatggcgggcctggagttttttttttctcgaaaacgcaggagagctgcatttcatttcattaaggggaagaaaaaacaatacaaaaacacaccacaaagaaaaaacaaagtagaagtgcccgggcctggagtttttgttgcttatttttgtctgtagtgtaaataagggaagtcctatagagttgttggtagtgcagtagtgtggtagtgtaaataagggaagtcctatagagttgttggtagtgcagtagtgtggtcacaaattaggcattcaattcacagtttcactcttcttcatttccgggagagcactgaaatacttcctatatacaaagttcatgaattaaatatctgaaaaatattaccttcatatctcaagatctctgttgttagcttttgatcttgtcctaacatgatttcaatgtcaataactcaatatggttagtgttgaagtagaatatcaactcattgctgttctatagccctcttatggttgtctttatgatctataacaggactatagcaggcaagctgcttcaatcttgttcccggacaaggccctgtccctgaataggaagaaacatcatggtacatactgtgaaacttttactgcctatgtcacgcagttttggccttgagcatacctgctaatataaatgattttttcactgcaacaagatcattttctgttcattatatcttatttttagcgaatagttcattatctcgccatgtttttgtttctgctagttcatctgaacatttgaagtaaacttgactgatacacatgaataaacaagcgatatactccctccgtcccaaaaaaaggcaaacactggtttccgtgtccaacgtttgaccgtccgtcttattcgaaaaaattatgaaaaaaattaaaaagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaattataaaaaaatttcatataagacggacagtcaaagttggacacggaaacccagggtttgcctttttttgggacggagggagtatgtcaaagacaatacaaagaaccattgtctgtctttccaggtgcgcatcaaatcaaaatcaaacgacccctgatatgcttcacattcacagtgtgcactgtgcatatttgctactagtattgtccattgaatctgtaggttgtatatgtgttaaaattcacgacctacatggatgagttaaataagttttttatgtaacatatttagcttcaatccatttaattcaagcgttccatgagaatagatgacacatgttccttctatagctcaataatgttttttttacactcatgcagggcgagcagaggcccttttgttagcggcctacggaaaaggtcttgtgctgccatcaggggagttcagcaaaacattatgacaatccgacttttatagggaggcttgactgactgatcattttgagtggactggtgcaaacattttggtatttcctcatgggcgccatcaagtatataattgaagtaagcccggagggtgcgtgcactagtccgttcaattttcaggaacacattagcagtgtaccattgtgtttaacaagctactgtaaatgatattattgctgtttgaacgtttgatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0268900, RefSeq:Os01g0268900