Os01g0269500

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0269500| Description = Disease resistance protein family protein| Version = NM_001049233.1 GI:115435879 GeneID:4326268| Length = 6495 bp| ...")
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Gene Name

Os01g0269500

Description

Disease resistance protein family protein

Version

NM_001049233.1 GI:115435879 GeneID:4326268

Length

6495 bp

Definition

Oryza sativa Japonica Group Os01g0269500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9292173..9298667

Sequence Coding Region

9293010..9293680,9295194..9297166,9298310..9298311

Expression

GEO Profiles:Os01g0269500

Genome Context

<gbrowseImage1> name=NC_008394:9292173..9298667 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9292173..9298667 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaacaagtcagggaggtagcatttgatgctgaggattgtattgacacattctggtgctacattggccatcattatggtgccaggggagtccgctgttattgtgtaccaaaggtagtctacaccttgaagacgttgaaagtgaggaacaacctggccatcaaaatccaaagtctcaggactcgtgtgcagagagtgagtgagcggaggctgagatacatgctcaacccaacaggatctctgtcttcttcaaactacattgatcaagagcgccgattatctgcactaaacatcgacgaatcacgacttgttggaatggctgataagacagaagaagtcaccaagctgctagacgaaggtcatgtgcctaatcttaaagtagtctccgttgttggctttggtggactaggaaaaaccacccttgcaatgactgtttacaagagcccagcagtgaaagggatccagagccgtgcttttgtggcagtgtcccaaaactatgatccccgagcacttctggaatctttactgaagcagcttatccaaagaccctttctcagagagccaaggagtgtggatgaagaaactagtactgaagaccccctcaaaggcatcgaaacctgggacatatgccaactcattaataggtgcagaaattacttggagaacaaaaggtacttcattgttcttcatgacctttggaggccagaagcatggatgactttgaagatagcctttcctgataatgataaacggagtagaatactaattactacaaggaatcaccttgtagctcaaatttgctgctattatccccatgactgtatttacagcatggagcccttacccagtgaagaatccagacatttattcttcaagagagtgttcaaattggacaaatgtccttcacagtaccaagatttggtggatatctccgatgccatattaagaaaatgtaatggcttgcctctagccattgtgagcataggaggaatgctagctcgaatgaaaaacaagacatatgcagaatggcagaaggtgtgtgacagattggactgtgggttagagataaataatactgtagggggaatgagaaagatactctctcttggctacaatgatttgccctaccatctgaaggcttgcttcttgtatcttagtgtttttcccgaggattttgagatcaaaagaggacccttgattagaagatgggcagcagagggtttcattggtagagtgcgtggatcaaatttggaagaaattgctgataagtattttgatgaatttatcagtagaaacatcgttacacctattcggattgatagcagcggcgaggtccggagttgtagggttcatgacatcatgctggaagtaatcagtgccatatctgtccaagaaaacttcatctcactcctagggaattacagttacagcataacagggcatgacaaaattcggcggctttccatccatgtaggtggtggtaaggagcaagatttctcatgtaggaacttatcccatctacgttctttgacaatcctaggctgcaaggagaaaccaatacctatcgctttggctgatctaacacttctaagggtgttagaccttgaaggttgcggctggttaagtgattcagatttgaaagatatttgcaagctgtatctgttgaggtatgtaagtcttcgaagcacaaatatttcaaagctaccaagggcagtggggaacctgaaagaacttttgacattggatgtaagaagcacttacattagggagttacctgcaactatcactcagctccggtgtctcaaacatcttcttgcaggccgttacaagtactatacaaggacacatcatgtgaaacattttgcttcaaaggaagctgtgactatacctgctgggttgaaaaatatgagtgcccttcagagcattgctcctgtaaacatctcatcaagcttccgtgcaatgcatgaactgggagagctgtctcagttgaccaagctttgtgctatcaacagaaagggagtagagaaatggagacctttcgctacctcattaagtaaactgagcaattcccttcgccacctatcagtaattcatatcgacaaaatggaacatgggcttgagttcttaatggacctaagctcgccgcctctcttcctgaaaaagctctacttttggggaagagtgagtgctctgcctccatggatttcatctctcagcaacttagtcaggctatcgctccgagaaaactatctggagagtgaattggtcaagatactagggaaacttcatagtcttttgtccctcaaactgtatgttaactcatatctagggacagaactatgctttgagcataatctttttccgagactcaaacaacttatgatagataatttaaaaaatcttgatgagcttagctttaagggaggagcgcctgatcttgagagactcacgttggcttttgtaaaagcacccgaaagaggcatttctggcatagagaatcttccaaaactaaaagaagttgagttcttcgggattattgttgactctgttgtcgagggggtgatagctgctgccaagattcatccaaatcatccaagagtttacagagacgagacaatcgacccaaggagccttactacagcatga</cdnaseq>

Protein Sequence

<aaseq>MKQVREVAFDAEDCIDTFWCYIGHHYGARGVRCYCVPKVVYTLK TLKVRNNLAIKIQSLRTRVQRVSERRLRYMLNPTGSLSSSNYIDQERRLSALNIDESR LVGMADKTEEVTKLLDEGHVPNLKVVSVVGFGGLGKTTLAMTVYKSPAVKGIQSRAFV AVSQNYDPRALLESLLKQLIQRPFLREPRSVDEETSTEDPLKGIETWDICQLINRCRN YLENKRYFIVLHDLWRPEAWMTLKIAFPDNDKRSRILITTRNHLVAQICCYYPHDCIY SMEPLPSEESRHLFFKRVFKLDKCPSQYQDLVDISDAILRKCNGLPLAIVSIGGMLAR MKNKTYAEWQKVCDRLDCGLEINNTVGGMRKILSLGYNDLPYHLKACFLYLSVFPEDF EIKRGPLIRRWAAEGFIGRVRGSNLEEIADKYFDEFISRNIVTPIRIDSSGEVRSCRV HDIMLEVISAISVQENFISLLGNYSYSITGHDKIRRLSIHVGGGKEQDFSCRNLSHLR SLTILGCKEKPIPIALADLTLLRVLDLEGCGWLSDSDLKDICKLYLLRYVSLRSTNIS KLPRAVGNLKELLTLDVRSTYIRELPATITQLRCLKHLLAGRYKYYTRTHHVKHFASK EAVTIPAGLKNMSALQSIAPVNISSSFRAMHELGELSQLTKLCAINRKGVEKWRPFAT SLSKLSNSLRHLSVIHIDKMEHGLEFLMDLSSPPLFLKKLYFWGRVSALPPWISSLSN LVRLSLRENYLESELVKILGKLHSLLSLKLYVNSYLGTELCFEHNLFPRLKQLMIDNL KNLDELSFKGGAPDLERLTLAFVKAPERGISGIENLPKLKEVEFFGIIVDSVVEGVIA AAKIHPNHPRVYRDETIDPRSLTTA</aaseq>

Gene Sequence

<dnaseqindica>838..1508#3022..4994#6138..6139#actcgccggtcgcggctctcccccgcacggccgcaccggcgctcgcggttgcgactcagggagccgagccgcagctgttgttggacgatggtgaggtcgcacgctcgcagcgcgcacgcgctcgatccggcggcggcggcggcacagtctttggttggggagcgaccgatgagcaggtttaggcctgtcccgccattcgatctctcatgcttttccttttgtttctagccttttcaatcttcatgctgctgctgctctcacgcacacagcagagagagctcaactggggacgaggcgtgcaatcgcaatctggggctacttcatgtcttcagctggggatgggtggtagcagtagcagctcgcgcaccggccacgaatgcggcactatcagttagtagcacttagcagtagatgcctgccgtgatggcttcaaaaaggtaaagaggaattaagtcttgtcttttgagaagcgatggcacataaggagtaaatttgagagaaattcgatggggattgcaacgaacagatcgatagtcgagcttattagcttaactgccttctcaatgtttaatttgcgtgcaaagcaaactagtcaaaatatctcaaataaaaacatctatattctttgttttcacaaagtttttgttttgcagcaaagcaagatagtcaaatagctcacatcaacaaaactaggatagactacttgattgcacaaacacaaatggccaaataacatatagtacttgggcttatgatgtttttccttttgtttcttagtttttcaatcttccttgaatacctgcaatgacactgggcttaatgtagacaagaacgtggatgaaacaagtcagggaggtagcatttgatgctgaggattgtattgacacattctggtgctacattggccatcattatggtgccaggggagtccgctgttattgtgtaccaaaggtagtctacaccttgaagacgttgaaagtgaggaacaacctggccatcaaaatccaaagtctcaggactcgtgtgcagagagtgagtgagcggaggctgagatacatgctcaacccaacaggatctctgtcttcttcaaactacattgatcaagagcgccgattatctgcactaaacatcgacgaatcacgacttgttggaatggctgataagacagaagaagtcaccaagctgctagacgaaggtcatgtgcctaatcttaaagtagtctccgttgttggctttggtggactaggaaaaaccacccttgcaatgactgtttacaagagcccagcagtgaaagggatccagagccgtgcttttgtggcagtgtcccaaaactatgatccccgagcacttctggaatctttactgaagcagcttatccaaagaccctttctcagagagccaaggagtgtggatgaagaaactagtactgaagaccccctcaaaggcatcgaaacctgggacatatgccaactcattaataggtgcagaaattacttggagaacaaaaggtaatactacttccttgaattttcagtgtcataacctttaataagtttacttggcttgcagtaccaatgacacactggaattttttaaaaattgactttcactaacaatgcaacaagcagttttctagcatagaagtcattgtatcttgaaatacatgtgtaacggggattataaaattaaaataactccagaacccaacatgtaacaaaaaagctaaagttttatcacctaaaacaacatacctaaaagagtggaaaactagaacaacccaaataatttaggccacttgaatgtttcaatggtaaatctagaaatttctgcttgagaggtcaacttttaatcactttatcaacataatagctcctacaaaatcccgataattagtaagcatttttagaaaagaagatgaaaagaccgtgggtccattcgaccagcacatatataatgggtatacactgaatatgtttgttcagagatatacacattctcacagtagtaaaaaaagggaaacaatacacctattttttaacttagatcaagactaaacttatgcgataaattctaattatatgataaagggaataattcattttttatttaaacaaataatatctcacaatttcttttggtttaatatgatgcatgatgtgttgtcgtattatttttaatgattatctcattaggggcatgtataataccatatgatggacattagaaccacaatttagctgtacaatcagcagtaaaatctctgaattcagtgtttaagtaattctaatgaaatataacactataataaaatcagaaatttacataaaaaaaggaaaggtagaaaagctactgtttgtgtttttcctctttttgtttgtctggcatgcgatgagttgtattcaatttttatatatgttaatagatctgtaagaaccccaatctcttcacaagtactccctccatctacttttgatagtcatatttccaaatctgaaaaatttattttttgataggcatatttcaattcaacaacctatcatcttaatgactttctcggatttaatgcatgactctccattcttccacacaagattggctacttgagcatcgagaaatgtaaatattaatgaatcgtttgtttacgatgaatgactagtagcatgtttaaatggatgataagtagaattatttatccttggtctgtgtgtcaagatgaaatatgactatcaaaagtagatggatggagtattaatttggcacctgttatgggtatacgtgtcaagtatatctgtagtagtgtgtgtcaagagtatgagtcctttccttctcatgtacactatgcatatgccctttggcctaactcaacacatacagttcattccctatttctcacttttctcaaatttggttcatctttatatatatatattttgcttgtagattgatagataattttgctcctcatcagaactttgcttttagttgaaagattatttactttcatctctcatatatgtttaggtacttcattgttcttcatgacctttggaggccagaagcatggatgactttgaagatagcctttcctgataatgataaacggagtagaatactaattactacaaggaatcaccttgtagctcaaatttgctgctattatccccatgactgtatttacagcatggagcccttacccagtgaagaatccagacatttattcttcaagagagtgttcaaattggacaaatgtccttcacagtaccaagatttggtggatatctccgatgccatattaagaaaatgtaatggcttgcctctagccattgtgagcataggaggaatgctagctcgaatgaaaaacaagacatatgcagaatggcagaaggtgtgtgacagattggactgtgggttagagataaataatactgtagggggaatgagaaagatactctctcttggctacaatgatttgccctaccatctgaaggcttgcttcttgtatcttagtgtttttcccgaggattttgagatcaaaagaggacccttgattagaagatgggcagcagagggtttcattggtagagtgcgtggatcaaatttggaagaaattgctgataagtattttgatgaatttatcagtagaaacatcgttacacctattcggattgatagcagcggcgaggtccggagttgtagggttcatgacatcatgctggaagtaatcagtgccatatctgtccaagaaaacttcatctcactcctagggaattacagttacagcataacagggcatgacaaaattcggcggctttccatccatgtaggtggtggtaaggagcaagatttctcatgtaggaacttatcccatctacgttctttgacaatcctaggctgcaaggagaaaccaatacctatcgctttggctgatctaacacttctaagggtgttagaccttgaaggttgcggctggttaagtgattcagatttgaaagatatttgcaagctgtatctgttgaggtatgtaagtcttcgaagcacaaatatttcaaagctaccaagggcagtggggaacctgaaagaacttttgacattggatgtaagaagcacttacattagggagttacctgcaactatcactcagctccggtgtctcaaacatcttcttgcaggccgttacaagtactatacaaggacacatcatgtgaaacattttgcttcaaaggaagctgtgactatacctgctgggttgaaaaatatgagtgcccttcagagcattgctcctgtaaacatctcatcaagcttccgtgcaatgcatgaactgggagagctgtctcagttgaccaagctttgtgctatcaacagaaagggagtagagaaatggagacctttcgctacctcattaagtaaactgagcaattcccttcgccacctatcagtaattcatatcgacaaaatggaacatgggcttgagttcttaatggacctaagctcgccgcctctcttcctgaaaaagctctacttttggggaagagtgagtgctctgcctccatggatttcatctctcagcaacttagtcaggctatcgctccgagaaaactatctggagagtgaattggtcaagatactagggaaacttcatagtcttttgtccctcaaactgtatgttaactcatatctagggacagaactatgctttgagcataatctttttccgagactcaaacaacttatgatagataatttaaaaaatcttgatgagcttagctttaagggaggagcgcctgatcttgagagactcacgttggcttttgtaaaagcacccgaaagaggcatttctggcatagagaatcttccaaaactaaaagaagttgagttcttcgggattattgttgactctgttgtcgagggggtgatagctgctgccaagattcatccaaatcatccaagagtttacagagacgagacaatcgacccaaggagccttactacagcatgtaggtttgcctttttcttcccttttaactcttaggcatttttctttcctagtttttcgtgaattgcacgacaacattaagtataatctccgcacattaacatgtttacatggattatgttaccatactgggctggtatagctgacatgccatatctgggtttcatatggggtaaaggtctgaagaccaggggaatggcactcacctacgtgtagccatatgcagggcttctccctagcagtgaaccgaaggacccatgaccctaggcagccgctcaggctggccggcatacagtgcaaagtccggcagccagccagccgtcgtggtttctgtccgggttctttgaaaattcttgggccggccactgcttcttcctaacgtgataaggacctatgatccttattatcactcgctggtttgtcattgcttactgaaaaatagacacaacccaacgttatgtagataggtcaacttgagccaggaacttccgttatatcatgaaactagatgatactaacaaacctaacataatctcatttcagaagggaactgatcctcttgttggtgcattacatgtgtgagaagtacctgattctagccctttggaaccataagcccataacagaattactacattcattgattttttatatcacttgttttaatttaaaatgtgagctaatctgcagctgctttctgttatcgaccctctaagtcaatagttctgagaaaaagataactaacaactaatttacattgaactctataatgatacgcagctgtcctgcgtgttcgagacaaaaaacgatcacactgaagtctgaagagtgcatgaacatgtaaatctatttttgtttatatatatagatagattgttagcatctacagtatagttatatccagttgctagaaaacactgatattggctcatcaaacaaatatacattgttcagggagcagtgtagcctgatgatgtattagagcaaagaattatcactactgtttcattaaaactaattgattttgtttggcccaattgcactgataactttgatttgaagtgttgtacttccatgctgtgatgcatggtgtgtatgcaagtgcatacatctgaaataatttgtttgaccttttgaatgacaggagccaggaatacattcaatctcctgctaggcaggcggttcagggccaacgactaagtaataatgccaaggaatctaccgtagtgactagcaaggaggatggacggtcattggtgaatggcctgccccgaaattctagagaaattacttcaactagcatggtggcccgcgcagattgcgcggctagcatcattatattttctctcatataatagcatatatgttttctcattatattattcaaatatattaaaataacatcataattttaaattttgcaataactttacgaaactacaaatgtgtaatattcatattgtattttatatacgtgttagttattaatgatttttagtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0269500, RefSeq:Os01g0269500